You are here

Home

ATCC10864_001543-T1, ATCC10864_001543-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001543-T1
Unique NameATCC10864_001543-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:748104..749400+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001543-T1 ID=ATCC10864_001543-T1|Name=ATCC10864_001543-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1297bp|location=Sequence derived from alignment at MCQH01000027:748104..749400+ (Aspergillus niger ATCC 10864)
ATGGTATGTCCCCAACTCACCCCAATGGTCCCAGGCGATTTGCCCATGAC
TATTGCTAACGTCCAGGGAACTAGGCTGCTCAAGTAATCTCCAATTCCGG
ACACGATGAGATGATTGTACGTGAACCGAGACAGAATCCTCCTACGCCAT
CGTGACAATGGCTTCATCCCTTTCTGCCTGGCCCCTGAGACTGACCGCAG
CGCATAGCACGATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACAT
GTTCATCGGACAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACAT
CGGTTGATTGAGACATTGAAGGGGTGAGGATCCTGATGCCTGGTCATCTT
ACGCGCCATCGTTTCTAACCTCCGTCCGTGTGTGAGCAGACATGAAGGAG
CTGTGTGGTGTGTGGCTTGGGTACGTCATAATGGCTTTCATTGTCAAGCT
GTCCTATTCAACTATGTATCTGACTCTGGTCTTCTCTAGGCGCACCCTAA
GTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCT
GGCGCGAACAACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGG
ACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTC
CTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACG
GACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATC
TTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGC
CGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGA
GATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAAG
TATGCACCATGAACCGCTTCCCACTGATACTCTGCTTTCAATTGAACTAA
GCTGACCCTTACACCTCTACAGCCCGGAAACCAAGACCTACAACAACACG
CAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGCTTGGTCGCC
TAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAGACAAGACAG
TCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGGACCAGCCAG
CAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAGCCCTAGTGG
AAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCTTGTGGAAGG
AAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAGGAGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000027:748104..749400+

>ATCC10864_001543-T1 ID=ATCC10864_001543-T1|Name=ATCC10864_001543-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5562bp|location=Sequence derived from alignment at MCQH01000027:748104..749400+ (Aspergillus niger ATCC 10864)
ATGGCTGCTCAAGTAATCTCCAATTCCGGACACGATGAGATGATTCACGA
TGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCATCGGACA
AAACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTGATTGAG
ACATTGAAGGGACATGAAGGAGCTGTGTGGTGTGTGGCTTGGGCGCACCC
TAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCA
TCTGGCGCGAACAACACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCT
TGGACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAGTGAACATGGT
CTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGG
ACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTGGACTCACCAG
ATCTTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCTGGGCACCTGC
AGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGC
GGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGATCTGGGACTAC
AACCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGGCCACTC
CGACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCAAGTCCT
ACATCGCCTCTGCCTCTCAAGACAAGACAGTCCGGATCTGGACTTCCGAT
GCGTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGACACTGT
ACTCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTGTGAGCG
GTGGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGGCAATGG
GAGAAGGTAAAGGATATCGAGGAGTAGATGGCTGCTCAAGTAATCTCCAA
TTCCGGACACGATGAGATGATTCACGATGCCGGCCTGGACTACTACGGCC
GCAGATTGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGAAATC
GAAGGAGAGACACATCGGTTGATTGAGACATTGAAGGGACATGAAGGAGC
TGTGTGGTGTGTGGCTTGGGCGCACCCTAAGTTCGGAACTATCCTCGCTT
CCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCGAACAACACCAGAAC
GCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAGGTGTTCGACTTCTC
TCTACACACCGCTTCAGTGAACATGGTCTCCTGGGCTCCGCATGAAAGTG
GCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATGTTAGCGTTCTTGAG
TTCCGTGACAATAGCTGGACTCACCAGATCTTCCACGCCCACGGTATGGG
CGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCCGGGCAGCTTGATCA
GCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCGTCACTGGTGGAAGC
GACAACCTGCTGAAGATCTGGGACTACAACCCGGAAACCAAGACCTACAA
CAACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTCGCTT
GGTCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCAAGAC
AAGACAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGTGGAC
CAGCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGGAGCC
CTAGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAGCTTG
TGGAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCGAGGA
GTAGATGGCTGCTCAAGTAATCTCCAATTCCGGACACGATGAGATGATTC
ACGATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTCATCG
GACAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGTTGAT
TGAGACATTGAAGGGACATGAAGGAGCTGTGTGGTGTGTGGCTTGGGCGC
ACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGAAAGGTG
CTCATCTGGCGCGAACAACACCAGAACGCCACGTCACCCGTCGCTGGCGG
CGCTTGGACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAGTGAACA
TGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGCCTCC
TCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTGGACTCA
CCAGATCTTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCTGGGCAC
CTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCGGGCCAG
CAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGATCTGGGA
CTACAACCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAAGGCC
ACTCCGACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTCCAAG
TCCTACATCGCCTCTGCCTCTCAAGACAAGACAGTCCGGATCTGGACTTC
CGATGCGTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTCGACA
CTGTACTCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGCTGTG
AGCGGTGGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGGGGCA
ATGGGAGAAGGTAAAGGATATCGAGGAGTAGATGGCTGCTCAAGTAATCT
CCAATTCCGGACACGATGAGATGATTCACGATGCCGGCCTGGACTACTAC
GGCCGCAGATTGGCAACATGTTCATCGGACAAAACGATAAAGATCTTTGA
AATCGAAGGAGAGACACATCGGTTGATTGAGACATTGAAGGGACATGAAG
GAGCTGTGTGGTGTGTGGCTTGGGCGCACCCTAAGTTCGGAACTATCCTC
GCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCGAACAACACCA
GAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAGGTGTTCGACT
TCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGCTCCGCATGAA
AGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATGTTAGCGTTCT
TGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCACGCCCACGGTA
TGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCCGGGCAGCTTG
ATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCGTCACTGGTGG
AAGCGACAACCTGCTGAAGATCTGGGACTACAACCCGGAAACCAAGACCT
ACAACAACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGATGTC
GCTTGGTCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCTCTCA
AGACAAGACAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGTCAGT
GGACCAGCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAGCTGG
AGCCCTAGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGGTCAG
CTTGTGGAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGATATCG
AGGAGTAGATGGCTGCTCAAGTAATCTCCAATTCCGGACACGATGAGATG
ATTCACGATGCCGGCCTGGACTACTACGGCCGCAGATTGGCAACATGTTC
ATCGGACAAAACGATAAAGATCTTTGAAATCGAAGGAGAGACACATCGGT
TGATTGAGACATTGAAGGGACATGAAGGAGCTGTGTGGTGTGTGGCTTGG
GCGCACCCTAAGTTCGGAACTATCCTCGCTTCCTCCTCGTACGATGGAAA
GGTGCTCATCTGGCGCGAACAACACCAGAACGCCACGTCACCCGTCGCTG
GCGGCGCTTGGACGAAGGTGTTCGACTTCTCTCTACACACCGCTTCAGTG
AACATGGTCTCCTGGGCTCCGCATGAAAGTGGCTGTCTCCTCGCTTGCGC
CTCCTCGGACGGACATGTTAGCGTTCTTGAGTTCCGTGACAATAGCTGGA
CTCACCAGATCTTCCACGCCCACGGTATGGGCGTGAACTCTATCAGCTGG
GCACCTGCAGCCGCCCCGGGCAGCTTGATCAGCTCCAACCCTGGACCGGG
CCAGCAGCGGAGATTCGTCACTGGTGGAAGCGACAACCTGCTGAAGATCT
GGGACTACAACCCGGAAACCAAGACCTACAACAACACGCAGACTCTCGAA
GGCCACTCCGACTGGGTTCGGGATGTCGCTTGGTCGCCTAGCGTTCTTTC
CAAGTCCTACATCGCCTCTGCCTCTCAAGACAAGACAGTCCGGATCTGGA
CTTCCGATGCGTCAAACCCTGGTCAGTGGACCAGCCAGCAACTTGAGTTC
GACACTGTACTCTGGCGAGTTAGCTGGAGCCCTAGTGGAAACATTCTTGC
TGTGAGCGGTGGCGATAACAAGGTCAGCTTGTGGAAGGAAAACCTCAAGG
GGCAATGGGAGAAGGTAAAGGATATCGAGGAGTAGATGGCTGCTCAAGTA
ATCTCCAATTCCGGACACGATGAGATGATTCACGATGCCGGCCTGGACTA
CTACGGCCGCAGATTGGCAACATGTTCATCGGACAAAACGATAAAGATCT
TTGAAATCGAAGGAGAGACACATCGGTTGATTGAGACATTGAAGGGACAT
GAAGGAGCTGTGTGGTGTGTGGCTTGGGCGCACCCTAAGTTCGGAACTAT
CCTCGCTTCCTCCTCGTACGATGGAAAGGTGCTCATCTGGCGCGAACAAC
ACCAGAACGCCACGTCACCCGTCGCTGGCGGCGCTTGGACGAAGGTGTTC
GACTTCTCTCTACACACCGCTTCAGTGAACATGGTCTCCTGGGCTCCGCA
TGAAAGTGGCTGTCTCCTCGCTTGCGCCTCCTCGGACGGACATGTTAGCG
TTCTTGAGTTCCGTGACAATAGCTGGACTCACCAGATCTTCCACGCCCAC
GGTATGGGCGTGAACTCTATCAGCTGGGCACCTGCAGCCGCCCCGGGCAG
CTTGATCAGCTCCAACCCTGGACCGGGCCAGCAGCGGAGATTCGTCACTG
GTGGAAGCGACAACCTGCTGAAGATCTGGGACTACAACCCGGAAACCAAG
ACCTACAACAACACGCAGACTCTCGAAGGCCACTCCGACTGGGTTCGGGA
TGTCGCTTGGTCGCCTAGCGTTCTTTCCAAGTCCTACATCGCCTCTGCCT
CTCAAGACAAGACAGTCCGGATCTGGACTTCCGATGCGTCAAACCCTGGT
CAGTGGACCAGCCAGCAACTTGAGTTCGACACTGTACTCTGGCGAGTTAG
CTGGAGCCCTAGTGGAAACATTCTTGCTGTGAGCGGTGGCGATAACAAGG
TCAGCTTGTGGAAGGAAAACCTCAAGGGGCAATGGGAGAAGGTAAAGGAT
ATCGAGGAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0090114COPII-coated vesicle budding
GO:1904263positive regulation of TORC1 signaling
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0030127COPII vesicle coat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005198structural molecule activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SEC13ATCC10864_001543Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001543-T1ATCC10864_001543-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001543-T1.exon1ATCC10864_001543-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001543-T1.exon2ATCC10864_001543-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001543-T1.exon3ATCC10864_001543-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001543-T1.exon4ATCC10864_001543-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001543-T1.exon5ATCC10864_001543-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_001543-T1.exon6ATCC10864_001543-T1.exon6Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001543-T1.cdsATCC10864_001543-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR037363
InterProIPR017986
InterProIPR001680
InterProIPR037596
InterProIPR036322
InterProIPR020472
PFAMPF00400
Properties
Property NameValue
ProductGTPase-activating protein S13
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:748104..749400 +
Powered by Drupal