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ATCC10864_001579-T1, ATCC10864_001579-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001579-T1
Unique NameATCC10864_001579-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:880948..883504+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001579-T1 ID=ATCC10864_001579-T1|Name=ATCC10864_001579-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2557bp|location=Sequence derived from alignment at MCQH01000027:880948..883504+ (Aspergillus niger ATCC 10864)
ATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTCGTGCTCAC
ATTGTCGGACGATGAGAATGACACGTTAAATCAGCTCGAAGAGGAGGGCG
AGGGCGACGATGGTGCGCTAGCCACGGGATCGAAAACGAAGAAGCGCAAG
AGAGATGATGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAACAAGAAGGT
GAAGAAGCAGGAACAACAGCAACAACAAGCACAACAGAAGAAAAAGAAGG
GAAAAAATGCCCCTGTTCAGGAGGAAGAGGATGAGGAGGAAGAGGAGGAA
GAGGATCAGGGTGAAGATGATGGCGCGCTTAATTCGGATTTCGAGTTCGA
TGTCGGCGGTGCTGCGAATGAGGTTAGGGATTTCGATGGGTGGGAGGTTA
ATGGTAATGAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGGATATCGAT
GATATTATTTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTGATTCGCAA
GCAGAAGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGAATTGGAGGATG
ATGATGAGGAGGATGGTGGTATGGAGGTCGACTTTGGGGATGATGAGCTG
CTTGCGGAGGATGGGTTCGGTATGGGTGTCGATGGGGAGGAGGAGAGCGA
GAAGTCCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTCTGATGAGGAGG
CTGAGGGCAGTGATGAAGACGAGCAGATGGATGAGGATGATGACGATGCT
GCTTCGGATGACGACTCGGTTGCTACTCCTGTCATGCACCCGGATGATAT
TGCCTCTGATCGGGACTCGGACGAGGAGAGTCAGGTCGACGCCGAGGAAG
AGGAGAAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAAAGACTTCCGAG
TCTGCTATGGCAGATGCGAAGCGGTCGTTCCAGGAATTCAACCTCTCTCG
TCCCATCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAACCCTACACCCA
TTCAGCGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGGATATTGTCGGT
AGTGCCGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTTGTCCCGATTCT
CGAACGTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAGTCGTGTTGCCA
TTCTCATGCCCACCCGTGAATTGGCGGTGCAGTGCTACAATGTCGCTACA
AAGCTGGCCACATACACGGACATCACCTTCTGTCAGCTGGTCGGTGGTTT
CAGTCTTCGCGAGCAGGAGAGCATCTTGAAGAAGCGTCCCGATGTGATCA
TCGCCACCCCCGGTCGTTTCATTGATCACATGCGCAACTCGGCCAGCTTC
ACCGTTGATACTCTGGAAATCCTGGTTCTGGATGAAGCCGACCGCATGCT
CGAGGACGGTTTCGCCGACGAGTTGAACGAGATTCTCACTACGATCCCCA
AGTCGCGCCAGACCATGCTTTTCTCGGCTACGATGACGGACACTGTCGAC
AAGCTCATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTGATGGTCGACGC
CAAGAAGAACACGGCCGTGACACTGGTGCAGGAATTCGTGCGTCTGCGCC
CCGGACGTGAGGACAAGCGACTAGGCTACCTTCTCTACCTCTGCAAAGAG
ATCTACACCGGTCGGGTGATTGTCTTCTTCCGACAGAAGAAGGAGGCGCA
CCGGGTGCGTATCATCTTCGGACTGCTGGGCTTGAAGGCTGCCGAGCTCC
ACGGTAGCATGAGCCAAGAACAGGTATGTTATTTTACATCGACTTTCATT
TTCTTCAATACGATCGATGATACTAATCGTGGGGTTTTCCAAACTACAGC
GTATCAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCCTGCTG
GCTACGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAGACGGT
CATCAACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCGTGTTG
GTCGTACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTGCCGCC
GAGCCTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAGTCGCA
AGGAGCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGATTCCT
GGGCGGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGTTGTCG
GAGGAGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTGACCAA
GGGAGAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCCGAAGC
GTACTTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGCTGGGC
GCGGCGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAGAAGCA
GAAGCTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCAGCGCC
AGGAAGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGAGCATG
AAGAATGGGCAATTGCCCAAAGCTAAGAAGGACAACAAGAAGAAGGGCAA
GAAATGA
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Coding sequence (CDS) from alignment at MCQH01000027:880948..883504+

>ATCC10864_001579-T1 ID=ATCC10864_001579-T1|Name=ATCC10864_001579-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4962bp|location=Sequence derived from alignment at MCQH01000027:880948..883504+ (Aspergillus niger ATCC 10864)
ATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTCGTGCTCAC
ATTGTCGGACGATGAGAATGACACGTTAAATCAGCTCGAAGAGGAGGGCG
AGGGCGACGATGGTGCGCTAGCCACGGGATCGAAAACGAAGAAGCGCAAG
AGAGATGATGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAACAAGAAGGT
GAAGAAGCAGGAACAACAGCAACAACAAGCACAACAGAAGAAAAAGAAGG
GAAAAAATGCCCCTGTTCAGGAGGAAGAGGATGAGGAGGAAGAGGAGGAA
GAGGATCAGGGTGAAGATGATGGCGCGCTTAATTCGGATTTCGAGTTCGA
TGTCGGCGGTGCTGCGAATGAGGTTAGGGATTTCGATGGGTGGGAGGTTA
ATGGTAATGAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGGATATCGAT
GATATTATTTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTGATTCGCAA
GCAGAAGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGAATTGGAGGATG
ATGATGAGGAGGATGGTGGTATGGAGGTCGACTTTGGGGATGATGAGCTG
CTTGCGGAGGATGGGTTCGGTATGGGTGTCGATGGGGAGGAGGAGAGCGA
GAAGTCCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTCTGATGAGGAGG
CTGAGGGCAGTGATGAAGACGAGCAGATGGATGAGGATGATGACGATGCT
GCTTCGGATGACGACTCGGTTGCTACTCCTGTCATGCACCCGGATGATAT
TGCCTCTGATCGGGACTCGGACGAGGAGAGTCAGGTCGACGCCGAGGAAG
AGGAGAAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAAAGACTTCCGAG
TCTGCTATGGCAGATGCGAAGCGGTCGTTCCAGGAATTCAACCTCTCTCG
TCCCATCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAACCCTACACCCA
TTCAGCGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGGATATTGTCGGT
AGTGCCGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTTGTCCCGATTCT
CGAACGTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAGTCGTGTTGCCA
TTCTCATGCCCACCCGTGAATTGGCGGTGCAGTGCTACAATGTCGCTACA
AAGCTGGCCACATACACGGACATCACCTTCTGTCAGCTGGTCGGTGGTTT
CAGTCTTCGCGAGCAGGAGAGCATCTTGAAGAAGCGTCCCGATGTGATCA
TCGCCACCCCCGGTCGTTTCATTGATCACATGCGCAACTCGGCCAGCTTC
ACCGTTGATACTCTGGAAATCCTGGTTCTGGATGAAGCCGACCGCATGCT
CGAGGACGGTTTCGCCGACGAGTTGAACGAGATTCTCACTACGATCCCCA
AGTCGCGCCAGACCATGCTTTTCTCGGCTACGATGACGGACACTGTCGAC
AAGCTCATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTGATGGTCGACGC
CAAGAAGAACACGGCCGTGACACTGGTGCAGGAATTCGTGCGTCTGCGCC
CCGGACGTGAGGACAAGCGACTAGGCTACCTTCTCTACCTCTGCAAAGAG
ATCTACACCGGTCGGGTGATTGTCTTCTTCCGACAGAAGAAGGAGGCGCA
CCGGGTGCGTATCATCTTCGGACTGCTGGGCTTGAAGGCTGCCGAGCTCC
ACGGTAGCATGAGCCAAGAACAGCGTATCAAGAGTGTCGAGAATTTCCGT
GAGGGCAAGGCGGCGTTCCTGCTGGCTACGGATCTGGCGTCGCGTGGTCT
GGATATCAAGGGCGTTGAGACGGTCATCAACTACGAAGCGCCGCAGAGCC
ATGAGATCTACCTGCATCGTGTTGGTCGTACTGCGCGTGCGGGCCGCTCC
GGTCGGGCCTGCACCATTGCCGCCGAGCCTGACCGCAAGGTGGTCAAGGC
GGCGGTGAAGGCGGGCAAGTCGCAAGGAGCCAAGATTGCCAGCCGTGTGA
TTGAACCGGCGGTGGCGGATTCCTGGGCGGCCAAGGCGGAGGAGTTGGCG
GACGAGGTGGAAGAGGTGTTGTCGGAGGAGAAGCTCGAGAAGCAGCTGGC
ACAGGCGGAGATGCAAGTGACCAAGGGAGAGAACCTGATCAAGCACGAGG
CGGAGATCAAGTCGCGGCCGAAGCGTACTTGGTTCGAGACGGAGCGCGAC
AAGAAGGCGGCGCGGAAGCTGGGCGCGGCGGAGCTCAACGGGCCCGATGC
CGGCATGTCCAAGAAGGAGAAGCAGAAGCTCAGCAACAAGGACAAGAAGC
GTCTGGATGATTCCCGTCAGCGCCAGGAAGCGGGTGCTGGTTGGAAGAAG
GGCCGGGCAACACGGGAGAGCATGAAGAATGGGCAATTGCCCAAAGCTAA
GAAGGACAACAAGAAGAAGGGCAAGAAATGAATGGCCGGAACGAAAAAGC
GCGCGAACGCCGACGACGACTTCGTGCTCACATTGTCGGACGATGAGAAT
GACACGTTAAATCAGCTCGAAGAGGAGGGCGAGGGCGACGATGGTGCGCT
AGCCACGGGATCGAAAACGAAGAAGCGCAAGAGAGATGATGCTGCGGCGG
CGCAGCAGGAGAAGGGGAAGAACAAGAAGGTGAAGAAGCAGGAACAACAG
CAACAACAAGCACAACAGAAGAAAAAGAAGGGAAAAAATGCCCCTGTTCA
GGAGGAAGAGGATGAGGAGGAAGAGGAGGAAGAGGATCAGGGTGAAGATG
ATGGCGCGCTTAATTCGGATTTCGAGTTCGATGTCGGCGGTGCTGCGAAT
GAGGTTAGGGATTTCGATGGGTGGGAGGTTAATGGTAATGAGGAGGGTAA
GGGTGGGGATAAGAAGGCTGTGGATATCGATGATATTATTTCGAGGAGGC
AGGCGAAGAAGGAGGCTGAGTTGATTCGCAAGCAGAAGAAGAAGCAGAAG
CAAGAGGAGGAGTTTAGTGAATTGGAGGATGATGATGAGGAGGATGGTGG
TATGGAGGTCGACTTTGGGGATGATGAGCTGCTTGCGGAGGATGGGTTCG
GTATGGGTGTCGATGGGGAGGAGGAGAGCGAGAAGTCCGATGCGGAGGAT
GAGGAGAAGGAAGAAGGGTCTGATGAGGAGGCTGAGGGCAGTGATGAAGA
CGAGCAGATGGATGAGGATGATGACGATGCTGCTTCGGATGACGACTCGG
TTGCTACTCCTGTCATGCACCCGGATGATATTGCCTCTGATCGGGACTCG
GACGAGGAGAGTCAGGTCGACGCCGAGGAAGAGGAGAAGCGCAAGGCTTT
CTTCGCGCCCGAGGAGGAAAAGACTTCCGAGTCTGCTATGGCAGATGCGA
AGCGGTCGTTCCAGGAATTCAACCTCTCTCGTCCCATCCTTCGTGGTCTC
GCCGGAGTCAACTTCTCGAACCCTACACCCATTCAGCGCAAGACGATCCC
CGTGGCTCTCCTGGGCAAGGATATTGTCGGTAGTGCCGTTACTGGTTCCG
GAAAGACTGCCGCCTTCGTTGTCCCGATTCTCGAACGTCTGCTGTTCCGG
CCGCGCAAGGTCCCGACGAGTCGTGTTGCCATTCTCATGCCCACCCGTGA
ATTGGCGGTGCAGTGCTACAATGTCGCTACAAAGCTGGCCACATACACGG
ACATCACCTTCTGTCAGCTGGTCGGTGGTTTCAGTCTTCGCGAGCAGGAG
AGCATCTTGAAGAAGCGTCCCGATGTGATCATCGCCACCCCCGGTCGTTT
CATTGATCACATGCGCAACTCGGCCAGCTTCACCGTTGATACTCTGGAAA
TCCTGGTTCTGGATGAAGCCGACCGCATGCTCGAGGACGGTTTCGCCGAC
GAGTTGAACGAGATTCTCACTACGATCCCCAAGTCGCGCCAGACCATGCT
TTTCTCGGCTACGATGACGGACACTGTCGACAAGCTCATTCGCGTCGGTC
TCAACCGCCCCGTGCGCTTGATGGTCGACGCCAAGAAGAACACGGCCGTG
ACACTGGTGCAGGAATTCGTGCGTCTGCGCCCCGGACGTGAGGACAAGCG
ACTAGGCTACCTTCTCTACCTCTGCAAAGAGATCTACACCGGTCGGGTGA
TTGTCTTCTTCCGACAGAAGAAGGAGGCGCACCGGGTGCGTATCATCTTC
GGACTGCTGGGCTTGAAGGCTGCCGAGCTCCACGGTAGCATGAGCCAAGA
ACAGCGTATCAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCC
TGCTGGCTACGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAG
ACGGTCATCAACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCG
TGTTGGTCGTACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTG
CCGCCGAGCCTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAG
TCGCAAGGAGCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGA
TTCCTGGGCGGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGT
TGTCGGAGGAGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTG
ACCAAGGGAGAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCC
GAAGCGTACTTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGC
TGGGCGCGGCGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAG
AAGCAGAAGCTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCA
GCGCCAGGAAGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGA
GCATGAAGAATGGGCAATTGCCCAAAGCTAAGAAGGACAACAAGAAGAAG
GGCAAGAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0003724RNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DRS1ATCC10864_001579Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001579-T1.exon1ATCC10864_001579-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001579-T1.exon2ATCC10864_001579-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001579-T1.cdsATCC10864_001579-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001579-T1ATCC10864_001579-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00270
InterProIPR027417
InterProIPR000629
PFAMPF00271
InterProIPR014014
InterProIPR001650
InterProIPR011545
InterProIPR014001
Properties
Property NameValue
NoteantiSMASH:Cluster_1000027.2
NoteSMCOG1122:ATP-dependent RNA helicase
Productnucleolar DEAD-box protein required for synthesis of 60S ribosomal subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:880948..883504 +
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