You are here

Home

ATCC10864_001622-T1, ATCC10864_001622-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001622-T1
Unique NameATCC10864_001622-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:1026370..1027270+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001622-T1 ID=ATCC10864_001622-T1|Name=ATCC10864_001622-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=901bp|location=Sequence derived from alignment at MCQH01000027:1026370..1027270+ (Aspergillus niger ATCC 10864)
ATGGGAGGCAAGAAAGCCGCCGGCGAGAACTCCAAGAAGGCTGCGGGTAA
TGCTCGTGTGCGTACCACCTCTATACTGATCTATCTTCTCTCTGCAAAAT
ATTACCCCGCCCCCGCTCCATCACCCACCAGAACCATATTCTCAACCACA
ACTACAGGAGTATAGGCAAAAGCTGACCAGATCCTCTATATGGGTGTAGA
AAGCCGAAGCAGCCGCCAACAAAAAGGCCGCCGAGGACGCCAAGCGCGCC
GCCGAGGAGGACGCTAAGTGGTCCAAGGGCGCGAAGGGTGGTAGCAAGCG
GTATGCAGACCCAAGTTATCAACATATCCCCTCCAAAACCAAAAAAGCAC
CCACTAACATAGTCTTTTTTGATAAAAACAACAGCGACGACGCCGAAGCC
AAAAAAGCCGAAGCCGCGCGCAAGAAGGCCGAACGCGACGCCCTCCTCGC
CGCCGAAGAAGCCTCCCAGCCCAGCAAACCCAAGAACAACAAAGCCGCAG
CGAAGAAGAACGCGGGACCCAGCCGAGGCACATTGGATTTGTCGCAGCTC
GACGATACATCAGGGAGCAAGAAGGCTTCTGCGCTCAATGCCTCCGGTAT
CGACAATGCGCTCGATGCACTGTCACTTACGGGCAAGGATAGCGGCAAGA
TCGATCGGCATCCCGAGAGACGGTTCAAGGCGGCGTATGCGGCATTTGAG
GAGAGACGGTTACCTGAGATTGAGGCTGAGAATCCTGGACTGAGACGTAA
CCAGCGCATTGAGATCTGTAAGAAGGAGTTTGAGAAGAGTGAGGAGAATC
CGTTCAACCAGGCGCATGTGGCGTTTGATGCTAGTCGGGAGGAGATTGCG
GCTGTGAAGGAGGCGGAGAGGAAGAAGGTTGAGGCGAGGTTGGCCAAATA
G
back to top

Coding sequence (CDS) from alignment at MCQH01000027:1026370..1027270+

>ATCC10864_001622-T1 ID=ATCC10864_001622-T1|Name=ATCC10864_001622-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2025bp|location=Sequence derived from alignment at MCQH01000027:1026370..1027270+ (Aspergillus niger ATCC 10864)
ATGGGAGGCAAGAAAGCCGCCGGCGAGAACTCCAAGAAGGCTGCGGGTAA
TGCTCGTAAAGCCGAAGCAGCCGCCAACAAAAAGGCCGCCGAGGACGCCA
AGCGCGCCGCCGAGGAGGACGCTAAGTGGTCCAAGGGCGCGAAGGGTGGT
AGCAAGCGCGACGACGCCGAAGCCAAAAAAGCCGAAGCCGCGCGCAAGAA
GGCCGAACGCGACGCCCTCCTCGCCGCCGAAGAAGCCTCCCAGCCCAGCA
AACCCAAGAACAACAAAGCCGCAGCGAAGAAGAACGCGGGACCCAGCCGA
GGCACATTGGATTTGTCGCAGCTCGACGATACATCAGGGAGCAAGAAGGC
TTCTGCGCTCAATGCCTCCGGTATCGACAATGCGCTCGATGCACTGTCAC
TTACGGGCAAGGATAGCGGCAAGATCGATCGGCATCCCGAGAGACGGTTC
AAGGCGGCGTATGCGGCATTTGAGGAGAGACGGTTACCTGAGATTGAGGC
TGAGAATCCTGGACTGAGACGTAACCAGCGCATTGAGATCTGTAAGAAGG
AGTTTGAGAAGAGTGAGGAGAATCCGTTCAACCAGGCGCATGTGGCGTTT
GATGCTAGTCGGGAGGAGATTGCGGCTGTGAAGGAGGCGGAGAGGAAGAA
GGTTGAGGCGAGGTTGGCCAAATAGATGGGAGGCAAGAAAGCCGCCGGCG
AGAACTCCAAGAAGGCTGCGGGTAATGCTCGTAAAGCCGAAGCAGCCGCC
AACAAAAAGGCCGCCGAGGACGCCAAGCGCGCCGCCGAGGAGGACGCTAA
GTGGTCCAAGGGCGCGAAGGGTGGTAGCAAGCGCGACGACGCCGAAGCCA
AAAAAGCCGAAGCCGCGCGCAAGAAGGCCGAACGCGACGCCCTCCTCGCC
GCCGAAGAAGCCTCCCAGCCCAGCAAACCCAAGAACAACAAAGCCGCAGC
GAAGAAGAACGCGGGACCCAGCCGAGGCACATTGGATTTGTCGCAGCTCG
ACGATACATCAGGGAGCAAGAAGGCTTCTGCGCTCAATGCCTCCGGTATC
GACAATGCGCTCGATGCACTGTCACTTACGGGCAAGGATAGCGGCAAGAT
CGATCGGCATCCCGAGAGACGGTTCAAGGCGGCGTATGCGGCATTTGAGG
AGAGACGGTTACCTGAGATTGAGGCTGAGAATCCTGGACTGAGACGTAAC
CAGCGCATTGAGATCTGTAAGAAGGAGTTTGAGAAGAGTGAGGAGAATCC
GTTCAACCAGGCGCATGTGGCGTTTGATGCTAGTCGGGAGGAGATTGCGG
CTGTGAAGGAGGCGGAGAGGAAGAAGGTTGAGGCGAGGTTGGCCAAATAG
ATGGGAGGCAAGAAAGCCGCCGGCGAGAACTCCAAGAAGGCTGCGGGTAA
TGCTCGTAAAGCCGAAGCAGCCGCCAACAAAAAGGCCGCCGAGGACGCCA
AGCGCGCCGCCGAGGAGGACGCTAAGTGGTCCAAGGGCGCGAAGGGTGGT
AGCAAGCGCGACGACGCCGAAGCCAAAAAAGCCGAAGCCGCGCGCAAGAA
GGCCGAACGCGACGCCCTCCTCGCCGCCGAAGAAGCCTCCCAGCCCAGCA
AACCCAAGAACAACAAAGCCGCAGCGAAGAAGAACGCGGGACCCAGCCGA
GGCACATTGGATTTGTCGCAGCTCGACGATACATCAGGGAGCAAGAAGGC
TTCTGCGCTCAATGCCTCCGGTATCGACAATGCGCTCGATGCACTGTCAC
TTACGGGCAAGGATAGCGGCAAGATCGATCGGCATCCCGAGAGACGGTTC
AAGGCGGCGTATGCGGCATTTGAGGAGAGACGGTTACCTGAGATTGAGGC
TGAGAATCCTGGACTGAGACGTAACCAGCGCATTGAGATCTGTAAGAAGG
AGTTTGAGAAGAGTGAGGAGAATCCGTTCAACCAGGCGCATGTGGCGTTT
GATGCTAGTCGGGAGGAGATTGCGGCTGTGAAGGAGGCGGAGAGGAAGAA
GGTTGAGGCGAGGTTGGCCAAATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001622ATCC10864_001622Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001622-T1.exon1ATCC10864_001622-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001622-T1.exon2ATCC10864_001622-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001622-T1.exon3ATCC10864_001622-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001622-T1.cdsATCC10864_001622-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001622-T1ATCC10864_001622-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF06244
InterProIPR010422
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:1026370..1027270 +
Powered by Drupal