You are here

Home

ATCC10864_001656-T1, ATCC10864_001656-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001656-T1
Unique NameATCC10864_001656-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:30080..31232-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001656-T1 ID=ATCC10864_001656-T1|Name=ATCC10864_001656-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1153bp|location=Sequence derived from alignment at MCQH01000029:30080..31232- (Aspergillus niger ATCC 10864)
ATGGTAAGATCGCTCCTTTGTGCAGCGAAAATCCTTTTGTCTCTATGACT
AAAACCTAAACTTTCCTCTCTTTAGGCTCCCACAGAGTCCAAGAAGCGCC
TCGCGCTCGCCATCATTGACTTCCTCGGTGCCAGCTTGAAGGATGGCACC
CTTACCGCCGACGATGCCGAATCCATCGAGATCGCCCAGTCCTGTATCGC
CGACACCTTCAAGGTTGACCCCTCCAACGAGGCTGCTGTGAAGGATGCCG
TGGGTGGACAGTCTCTGGCCAGCATCTACAGTGTCTACGAGAAGCTTCGC
AACAAGCCCACCGGCGACTCTGCCAAGGCTGGCGAAAGCCAGAAGCCTGC
GGCTGGCGCTCCCACCCCCGAGTCCGATAAGCTGAAGTCCGAGGGTAACG
GTGCCATGGCCCGCAAGGACTACAGCACCGCTATTGACCTCTACACCCAA
GCCCTGGCTATTGCTCCCTCGAACCCCATCTACCTCTCCAACCGGGCTGC
TGCCTATTCCGCGGCCGGACAGCACGAGAAGGCGGCCGAGGATGCCGAGC
TCGCCACTGCTGTTGACCCCAAGTACTCCAAGGCCTGGAGCCGTCTGGGA
CTGGCTCGTTTCGACTTGGCTGATTACCACGGTGCCAAGGAGGCCTATGA
GAAGGGTATCGAGGCTGAGGGCAACGGCGGCAGCGAGGCCATGAAGCGGG
GTCTGGAGACTACTAAGCGCAAGATCGAGGAGGCCAAGCGTAGCACCGAG
CCTCCCGCTGATGCTGTTGACGATGCTGCTGGTGCTTCCCGTGGTGGTGG
CGGTATGCCTGATCTGTCTTCCCTTGCTAGCATGCTGGGAGGTGGAGGTG
GCGGCGGCGGTATGCCCGACCTCAGCTCTATCATGAGCAACCCCATGTTC
GCCAGCATGGCCCAGAACCTGATGAGCAACCCCGATATGCTCAACAACCT
CATGAGCAACCCCCAGCTGAGACAGATGGCTGAAAACTATGGCCGTGGCG
GTGGTATGCCCGACATGTCCTCTTTGATGAGCGATCCCAACATTGCCGAT
ATGTAAGTAATATGACATACCTGGTCCATTGCGTTGCAGCTGACATGTAT
TTTCTAGGGCTCGTAACATGATGGGCGGCGGTGCCGGACGTGGAAACCAG
TAA
back to top

Coding sequence (CDS) from alignment at MCQH01000029:30080..31232-

>ATCC10864_001656-T1 ID=ATCC10864_001656-T1|Name=ATCC10864_001656-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3078bp|location=Sequence derived from alignment at MCQH01000029:30080..31232- (Aspergillus niger ATCC 10864)
GGCTCGTAACATGATGGGCGGCGGTGCCGGACGTGGAAACCAGTAAGCTC
CCACAGAGTCCAAGAAGCGCCTCGCGCTCGCCATCATTGACTTCCTCGGT
GCCAGCTTGAAGGATGGCACCCTTACCGCCGACGATGCCGAATCCATCGA
GATCGCCCAGTCCTGTATCGCCGACACCTTCAAGGTTGACCCCTCCAACG
AGGCTGCTGTGAAGGATGCCGTGGGTGGACAGTCTCTGGCCAGCATCTAC
AGTGTCTACGAGAAGCTTCGCAACAAGCCCACCGGCGACTCTGCCAAGGC
TGGCGAAAGCCAGAAGCCTGCGGCTGGCGCTCCCACCCCCGAGTCCGATA
AGCTGAAGTCCGAGGGTAACGGTGCCATGGCCCGCAAGGACTACAGCACC
GCTATTGACCTCTACACCCAAGCCCTGGCTATTGCTCCCTCGAACCCCAT
CTACCTCTCCAACCGGGCTGCTGCCTATTCCGCGGCCGGACAGCACGAGA
AGGCGGCCGAGGATGCCGAGCTCGCCACTGCTGTTGACCCCAAGTACTCC
AAGGCCTGGAGCCGTCTGGGACTGGCTCGTTTCGACTTGGCTGATTACCA
CGGTGCCAAGGAGGCCTATGAGAAGGGTATCGAGGCTGAGGGCAACGGCG
GCAGCGAGGCCATGAAGCGGGGTCTGGAGACTACTAAGCGCAAGATCGAG
GAGGCCAAGCGTAGCACCGAGCCTCCCGCTGATGCTGTTGACGATGCTGC
TGGTGCTTCCCGTGGTGGTGGCGGTATGCCTGATCTGTCTTCCCTTGCTA
GCATGCTGGGAGGTGGAGGTGGCGGCGGCGGTATGCCCGACCTCAGCTCT
ATCATGAGCAACCCCATGTTCGCCAGCATGGCCCAGAACCTGATGAGCAA
CCCCGATATGCTCAACAACCTCATGAGCAACCCCCAGCTGAGACAGATGG
CTGAAAACTATGGCCGTGGCGGTGGTATGCCCGACATGTCCTCTTTGATG
AGCGATCCCAACATTGCCGATATATGGGCTCGTAACATGATGGGCGGCGG
TGCCGGACGTGGAAACCAGTAAGCTCCCACAGAGTCCAAGAAGCGCCTCG
CGCTCGCCATCATTGACTTCCTCGGTGCCAGCTTGAAGGATGGCACCCTT
ACCGCCGACGATGCCGAATCCATCGAGATCGCCCAGTCCTGTATCGCCGA
CACCTTCAAGGTTGACCCCTCCAACGAGGCTGCTGTGAAGGATGCCGTGG
GTGGACAGTCTCTGGCCAGCATCTACAGTGTCTACGAGAAGCTTCGCAAC
AAGCCCACCGGCGACTCTGCCAAGGCTGGCGAAAGCCAGAAGCCTGCGGC
TGGCGCTCCCACCCCCGAGTCCGATAAGCTGAAGTCCGAGGGTAACGGTG
CCATGGCCCGCAAGGACTACAGCACCGCTATTGACCTCTACACCCAAGCC
CTGGCTATTGCTCCCTCGAACCCCATCTACCTCTCCAACCGGGCTGCTGC
CTATTCCGCGGCCGGACAGCACGAGAAGGCGGCCGAGGATGCCGAGCTCG
CCACTGCTGTTGACCCCAAGTACTCCAAGGCCTGGAGCCGTCTGGGACTG
GCTCGTTTCGACTTGGCTGATTACCACGGTGCCAAGGAGGCCTATGAGAA
GGGTATCGAGGCTGAGGGCAACGGCGGCAGCGAGGCCATGAAGCGGGGTC
TGGAGACTACTAAGCGCAAGATCGAGGAGGCCAAGCGTAGCACCGAGCCT
CCCGCTGATGCTGTTGACGATGCTGCTGGTGCTTCCCGTGGTGGTGGCGG
TATGCCTGATCTGTCTTCCCTTGCTAGCATGCTGGGAGGTGGAGGTGGCG
GCGGCGGTATGCCCGACCTCAGCTCTATCATGAGCAACCCCATGTTCGCC
AGCATGGCCCAGAACCTGATGAGCAACCCCGATATGCTCAACAACCTCAT
GAGCAACCCCCAGCTGAGACAGATGGCTGAAAACTATGGCCGTGGCGGTG
GTATGCCCGACATGTCCTCTTTGATGAGCGATCCCAACATTGCCGATATA
TGGGCTCGTAACATGATGGGCGGCGGTGCCGGACGTGGAAACCAGTAAGC
TCCCACAGAGTCCAAGAAGCGCCTCGCGCTCGCCATCATTGACTTCCTCG
GTGCCAGCTTGAAGGATGGCACCCTTACCGCCGACGATGCCGAATCCATC
GAGATCGCCCAGTCCTGTATCGCCGACACCTTCAAGGTTGACCCCTCCAA
CGAGGCTGCTGTGAAGGATGCCGTGGGTGGACAGTCTCTGGCCAGCATCT
ACAGTGTCTACGAGAAGCTTCGCAACAAGCCCACCGGCGACTCTGCCAAG
GCTGGCGAAAGCCAGAAGCCTGCGGCTGGCGCTCCCACCCCCGAGTCCGA
TAAGCTGAAGTCCGAGGGTAACGGTGCCATGGCCCGCAAGGACTACAGCA
CCGCTATTGACCTCTACACCCAAGCCCTGGCTATTGCTCCCTCGAACCCC
ATCTACCTCTCCAACCGGGCTGCTGCCTATTCCGCGGCCGGACAGCACGA
GAAGGCGGCCGAGGATGCCGAGCTCGCCACTGCTGTTGACCCCAAGTACT
CCAAGGCCTGGAGCCGTCTGGGACTGGCTCGTTTCGACTTGGCTGATTAC
CACGGTGCCAAGGAGGCCTATGAGAAGGGTATCGAGGCTGAGGGCAACGG
CGGCAGCGAGGCCATGAAGCGGGGTCTGGAGACTACTAAGCGCAAGATCG
AGGAGGCCAAGCGTAGCACCGAGCCTCCCGCTGATGCTGTTGACGATGCT
GCTGGTGCTTCCCGTGGTGGTGGCGGTATGCCTGATCTGTCTTCCCTTGC
TAGCATGCTGGGAGGTGGAGGTGGCGGCGGCGGTATGCCCGACCTCAGCT
CTATCATGAGCAACCCCATGTTCGCCAGCATGGCCCAGAACCTGATGAGC
AACCCCGATATGCTCAACAACCTCATGAGCAACCCCCAGCTGAGACAGAT
GGCTGAAAACTATGGCCGTGGCGGTGGTATGCCCGACATGTCCTCTTTGA
TGAGCGATCCCAACATTGCCGATATATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001656ATCC10864_001656Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001656-T1ATCC10864_001656-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001656-T1.cdsATCC10864_001656-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001656-T1.exon3ATCC10864_001656-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001656-T1.exon2ATCC10864_001656-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001656-T1.exon1ATCC10864_001656-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR019734
PFAMPF16546
InterProIPR032374
PFAMPF13181
InterProIPR013026
InterProIPR011990
InterProIPR006636
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:30080..31232 -
Powered by Drupal