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ATCC10864_001676-T1, ATCC10864_001676-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001676-T1
Unique NameATCC10864_001676-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:87053..88638-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001676-T1 ID=ATCC10864_001676-T1|Name=ATCC10864_001676-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1586bp|location=Sequence derived from alignment at MCQH01000029:87053..88638- (Aspergillus niger ATCC 10864)
ATGGCTACCAATTCATTCCGCGATTCGGTCAACTCCTTGGGTTGGTCGCG
ACGAGACCCAGATCTCTCCACCCGCACCAACTCGTCGAATACGCCATTCC
TCTCACGGTTACAGTCTTGGAATCCATTTGGTCAAGGGGAGGGCTATCTG
CAACTACCTACTCATGAAGCTCCAGGAGCTCCCCTACCCGCCGCAAGTCG
CCGAGAGGAGGAAGATACTTTCTTTGCCTGTAAGTCCTCCGAACGCATGA
CCGATTTTCCGTAAAGATGCTTTCTTCCTTGATTTGCTGCACTGCCCAGT
CCAGGTGACAGAGACTCAGTTCCTGCATCTGTCCGGGTTCCACGGAAGCC
CTAGGAAAAGCTGAGTGATGTACTCTACTCTCTATCTACCTATGGGACTA
TTCTTTGTCATCTACCGTTTAATTTTCCTATTTTCCATTTTTCGTTTCTT
TTTCTTTTTTTCTGCGCTTCTACGCATTTTCTATTTTTCTTCTTGCCGCC
CTACCTCCTCCTCTTTTAACTTTTGGCTAATGCTAATCATACATTCCCTT
TACAGTAAGTCGATGGGATCGGATGCTCATTTTCATCGCATGCAACCTTG
GTGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGGTTCTATCG
CTGAAACCCCGCAAATTTGCCATCCTGTAAGTTACTCTACAGATTCCCCG
TCGATCTTCCTCGAACCCCAATACATCCCCTACTTCGCCCACCCACCGGG
GAGGGAGGCACGAGGCGGTGGAGTGCTTGTCATGCCCTCCTCACTGGGGA
CTATGCACCACGCGTCTCCGATCCGACTACATTCCAGCGTCTGTGCTGAA
CCCCCCATCACGCCTCACCCATACTGTTTGCCAAGAAACTTCTTGTGAAT
CTGTGGCTGACCGAACCGGTTTTACCTCTTGAACTAGGTGGTCGGTTGGT
TCCTTGCTCTTTCTCCTATCATGGGCAGTCCTCATGGGACCCTGGGTCTA
CGCGAAACATCTGGTCTCGGGACCACGTCTGCCCTTCACGGCGGCCTATT
TCGGCTCGATCGCCATGACTTTGTACTTTGCTATCGGAGTAAGTACCCCT
GTTTGTTTGGCTCTAGCTACATTTCCCAGGATCTTCCCTGCCAGACCATG
TTGTCTATGCCTGTACTATCTGAGCGTACGCCTCTGCGATCGCATACCAA
CCTGTCGATTTCGAGGATCTTGCATACCTGGGGCGTGCGCGTACACTCGG
AGCCTTCAGCCGACGAAATGACATCATAATGCACCGCCACCCCGGTCGTG
GATATGATCTCTCACATCGTCCTGCAACAGTAGCAGGTTGGATGTGCATG
CGCTACTGTAGACCCCAGTCGGGCCCGTGCACACAAGAAAACCAGCGGGA
ATACCGGTCGCTAACCGTCTCTGTCCTCTCTAGCTTCATTCAACCCTGTT
GACGCTCATCTCGTCGGTGTTTCAGCTGGCTGCCCTGCTCTGGTACCTTG
TCAGCTACTTCCCTATGGGTAGCACTGGACTGCAGTTTATGGGAAGATTC
GGAGCTCAGCGTGTCACTTCGTGGATGACCAGCTGA
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Coding sequence (CDS) from alignment at MCQH01000029:87053..88638-

>ATCC10864_001676-T1 ID=ATCC10864_001676-T1|Name=ATCC10864_001676-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2616bp|location=Sequence derived from alignment at MCQH01000029:87053..88638- (Aspergillus niger ATCC 10864)
CTTCATTCAACCCTGTTGACGCTCATCTCGTCGGTGTTTCAGCTGGCTGC
CCTGCTCTGGTACCTTGTCAGCTACTTCCCTATGGGTAGCACTGGACTGC
AGTTTATGGGAAGATTCGGAGCTCAGCGTGTCACTTCGTGGATGACCAGC
TGAGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTATCATGGGCAGTCCTCA
TGGGACCCTGGGTCTACGCGAAACATCTGGTCTCGGGACCACGTCTGCCC
TTCACGGCGGCCTATTTCGGCTCGATCGCCATGACTTTGTACTTTGCTAT
CGGATAAGTCGATGGGATCGGATGCTCATTTTCATCGCATGCAACCTTGG
TGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGGTTCTATCGC
TGAAACCCCGCAAATTTGCCATCCTATGGCTACCAATTCATTCCGCGATT
CGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGATCTCTCCACCCGC
ACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACAGTCTTGGAATCC
ATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTCATGAAGCTCCAG
GAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAAGATACTTTCTTT
GCCTCTTCATTCAACCCTGTTGACGCTCATCTCGTCGGTGTTTCAGCTGG
CTGCCCTGCTCTGGTACCTTGTCAGCTACTTCCCTATGGGTAGCACTGGA
CTGCAGTTTATGGGAAGATTCGGAGCTCAGCGTGTCACTTCGTGGATGAC
CAGCTGAGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTATCATGGGCAGTC
CTCATGGGACCCTGGGTCTACGCGAAACATCTGGTCTCGGGACCACGTCT
GCCCTTCACGGCGGCCTATTTCGGCTCGATCGCCATGACTTTGTACTTTG
CTATCGGATAAGTCGATGGGATCGGATGCTCATTTTCATCGCATGCAACC
TTGGTGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGGTTCTA
TCGCTGAAACCCCGCAAATTTGCCATCCTATGGCTACCAATTCATTCCGC
GATTCGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGATCTCTCCAC
CCGCACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACAGTCTTGGA
ATCCATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTCATGAAGCT
CCAGGAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAAGATACTTT
CTTTGCCTCTTCATTCAACCCTGTTGACGCTCATCTCGTCGGTGTTTCAG
CTGGCTGCCCTGCTCTGGTACCTTGTCAGCTACTTCCCTATGGGTAGCAC
TGGACTGCAGTTTATGGGAAGATTCGGAGCTCAGCGTGTCACTTCGTGGA
TGACCAGCTGAGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTATCATGGGC
AGTCCTCATGGGACCCTGGGTCTACGCGAAACATCTGGTCTCGGGACCAC
GTCTGCCCTTCACGGCGGCCTATTTCGGCTCGATCGCCATGACTTTGTAC
TTTGCTATCGGATAAGTCGATGGGATCGGATGCTCATTTTCATCGCATGC
AACCTTGGTGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCCCGGT
TCTATCGCTGAAACCCCGCAAATTTGCCATCCTATGGCTACCAATTCATT
CCGCGATTCGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGATCTCT
CCACCCGCACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACAGTCT
TGGAATCCATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTCATGA
AGCTCCAGGAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAAGATA
CTTTCTTTGCCTCTTCATTCAACCCTGTTGACGCTCATCTCGTCGGTGTT
TCAGCTGGCTGCCCTGCTCTGGTACCTTGTCAGCTACTTCCCTATGGGTA
GCACTGGACTGCAGTTTATGGGAAGATTCGGAGCTCAGCGTGTCACTTCG
TGGATGACCAGCTGAGTGGTCGGTTGGTTCCTTGCTCTTTCTCCTATCAT
GGGCAGTCCTCATGGGACCCTGGGTCTACGCGAAACATCTGGTCTCGGGA
CCACGTCTGCCCTTCACGGCGGCCTATTTCGGCTCGATCGCCATGACTTT
GTACTTTGCTATCGGATAAGTCGATGGGATCGGATGCTCATTTTCATCGC
ATGCAACCTTGGTGCTGCCGTTTGCTTCCTTCTTTGCTTTTTCCTATTCC
CGGTTCTATCGCTGAAACCCCGCAAATTTGCCATCCTATGGCTACCAATT
CATTCCGCGATTCGGTCAACTCCTTGGGTTGGTCGCGACGAGACCCAGAT
CTCTCCACCCGCACCAACTCGTCGAATACGCCATTCCTCTCACGGTTACA
GTCTTGGAATCCATTTGGTCAAGGGGAGGGCTATCTGCAACTACCTACTC
ATGAAGCTCCAGGAGCTCCCCTACCCGCCGCAAGTCGCCGAGAGGAGGAA
GATACTTTCTTTGCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001676ATCC10864_001676Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001676-T1ATCC10864_001676-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001676-T1.cdsATCC10864_001676-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001676-T1.exon4ATCC10864_001676-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001676-T1.exon3ATCC10864_001676-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001676-T1.exon2ATCC10864_001676-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001676-T1.exon1ATCC10864_001676-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04178
InterProIPR007305
InterProIPR011691
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:87053..88638 -
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