You are here

Home

ATCC10864_001687-T1, ATCC10864_001687-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001687-T1
Unique NameATCC10864_001687-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:118393..120215-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001687-T1 ID=ATCC10864_001687-T1|Name=ATCC10864_001687-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1823bp|location=Sequence derived from alignment at MCQH01000029:118393..120215- (Aspergillus niger ATCC 10864)
ATGGCTTCGGATAACCCACTCCTTTTCTCCGCGCCAATTCCTCTCCACCT
CATGGCGCCCTTGACCATCTCCCGCACCCGGACAGGCTGCTGGGCTTGTA
GGGCCCGGAGGGTAAAGTGTGATGGTATTATAGTTTCCTCTTGGTTTGAA
AAGCTAGTGTAAGCTAACACATTAGCAAAGAGACCCACCCCGTCTGCCGT
CGCTGCGCGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTGACTTG
GCTTGATGAATCAATCGCCAAGGGCGTGTGTCATGGGAGGGCCGGAGTAT
GGTCGAAGAATGGCCGGAAGAGAAAGGATGTCTCAAATGAGCAGAGTCTG
GAGATGGTGCGACATACTGTGCCTAAGGCGTCGCACCAGCAGTGGATGTT
TCTAAACACGTCCGCTGACGACGTGAACCGGCTCTGTATGCAGTACCAAA
CGGTATATGGCGGGATTTTACCCAGTCATCAACGACGGCTGATACTATCA
CCCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGAGAGGA
CCAAATGCTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTCAACCC
TGGTCGACAATGTGCAATCGAATCCATATCGATACTTGATCCTGCCCATG
GCCCTCAACTCCGACGGCATCTATCATGCGGCGTTGGCGATCTCCGCAAA
TACCCTGCGTCTTTCCAAAGTACAGTATCGTGTCCCTGCTTTGGAGCACC
ATCATCGTGCGCTACTCTACCTCCAATCTCTTCTAGATCGAGAGAGTTGG
TCGAATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCTGTTG
GTTTGAGGTATTGAAGCCTTTTCACCATAATACAGCCAATTAGTTGTGAG
AATTGACACCATTAGATCTCAGATCATAGTCGTTCATCGTGGGTGACACA
CCTTAACGGGTTCCAGGATGTCATGTCTGCACGAAAGCAACGACATTGGA
AAACATCATCGCAGCACAGTCAGGAGCTTCTTGTTTTTTTCGACCGCTAC
TTTGCTTTCCACCTCGTTCTTGCTCGAACGGCCTTTCGATGGGATGGGCC
ACGAACACACCCGTGTCTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAA
TTATTGACCCTTATATGGGATTTAGCCACGCACTACTTCTCTTAATAAAT
GAAGTGACTGACTTGGCATGGCAAGAACATGAGCTGGACATTCAGAAGGT
GTATGGGCTGAAGCACTCATTGGAGGTGCTCCGTCAGACGCCACCTCATG
GGGATATTAACTTACACTCAGGACAGGAATGTATGGTCATTGCTGAAGCA
AACCGCTTGGGTGCAATACTGCTCCTGTACGAGATATGCTCGTCTTCTGA
ATCAATTTCTTCATGTTCATCATTTAGCTCGGAGGAGAAACTCCGCTATG
TTCGGCAGATTCTCGATCTTATTCAGGCGCACAAGTCCAACATGATGCGC
ACTGCCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTC
GGACGACAACGACAGAGTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGG
CCATTCGTCGGTTTGGCGTACGTCTCTCCACCCGTATATACCATGTTACA
AGCTAATGATTTAGAATATCGCACCGGCAAGAGAAGTGATAGAGATGGTC
TGGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTC
AGGGAAGACAGCGCGCTTTGAATGGGAACATGCGATGACGATGCTTGGAG
GGTTGAAGCTAGCGCTAACATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000029:118393..120215-

>ATCC10864_001687-T1 ID=ATCC10864_001687-T1|Name=ATCC10864_001687-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6564bp|location=Sequence derived from alignment at MCQH01000029:118393..120215- (Aspergillus niger ATCC 10864)
AATATCGCACCGGCAAGAGAAGTGATAGAGATGGTCTGGCGACGCCGTGA
CCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCAGGGAAGACAGCGC
GCTTTGAATGGGAACATGCGATGACGATGCTTGGAGGGTTGAAGCTAGCG
CTAACATAGATCTCAGATCATAGTCGTTCATCGTGGGTGACACACCTTAA
CGGGTTCCAGGATGTCATGTCTGCACGAAAGCAACGACATTGGAAAACAT
CATCGCAGCACAGTCAGGAGCTTCTTGTTTTTTTCGACCGCTACTTTGCT
TTCCACCTCGTTCTTGCTCGAACGGCCTTTCGATGGGATGGGCCACGAAC
ACACCCGTGTCTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAATTATTG
ACCCTTATATGGGATTTAGCCACGCACTACTTCTCTTAATAAATGAAGTG
ACTGACTTGGCATGGCAAGAACATGAGCTGGACATTCAGAAGGTGTATGG
GCTGAAGCACTCATTGGAGGTGCTCCGTCAGACGCCACCTCATGGGGATA
TTAACTTACACTCAGGACAGGAATGTATGGTCATTGCTGAAGCAAACCGC
TTGGGTGCAATACTGCTCCTGTACGAGATATGCTCGTCTTCTGAATCAAT
TTCTTCATGTTCATCATTTAGCTCGGAGGAGAAACTCCGCTATGTTCGGC
AGATTCTCGATCTTATTCAGGCGCACAAGTCCAACATGATGCGCACTGCC
GTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCGGACGA
CAACGACAGAGTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGCCATTC
GTCGGTTTGGCCTTGCAGTTGACTTGGCTTGATGAATCAATCGCCAAGGG
CGTGTGTCATGGGAGGGCCGGAGTATGGTCGAAGAATGGCCGGAAGAGAA
AGGATGTCTCAAATGAGCAGAGTCTGGAGATGGTGCGACATACTGTGCCT
AAGGCGTCGCACCAGCAGTGGATGTTTCTAAACACGTCCGCTGACGACGT
GAACCGGCTCTGTATGCAGTACCAAACGGTATATGGCGGGATTTTACCCA
GTCATCAACGACGGCTGATACTATCACCCGCATTGAATACAATGCCAGCC
ACGGCCTCGAATCGATCCAGAGAGGACCAAATGCTACTGGCATTCTTTGA
GGCAGTCATTTGCAGCAGCTCAACCCTGGTCGACAATGTGCAATCGAATC
CATATCGATACTTGATCCTGCCCATGGCCCTCAACTCCGACGGCATCTAT
CATGCGGCGTTGGCGATCTCCGCAAATACCCTGCGTCTTTCCAAAGTACA
GTATCGTGTCCCTGCTTTGGAGCACCATCATCGTGCGCTACTCTACCTCC
AATCTCTTCTAGATCGAGAGAGTTGGTCGAATTGGGAGATGGATGAGATC
TTGGGGCTTGTTTTGATGCTCTGTTGGTTTGAGATGGCTTCGGATAACCC
ACTCCTTTTCTCCGCGCCAATTCCTCTCCACCTCATGGCGCCCTTGACCA
TCTCCCGCACCCGGACAGGCTGCTGGGCTTGTAGGGCCCGGAGGGTAAAG
TGTGATGGTATTATAGTTTCCTCTTGGTTTGAAAAGCTAGTAATATCGCA
CCGGCAAGAGAAGTGATAGAGATGGTCTGGCGACGCCGTGACCTTAACCA
AAATGAATTTGCCAACGGCGCCATGTCAGGGAAGACAGCGCGCTTTGAAT
GGGAACATGCGATGACGATGCTTGGAGGGTTGAAGCTAGCGCTAACATAG
ATCTCAGATCATAGTCGTTCATCGTGGGTGACACACCTTAACGGGTTCCA
GGATGTCATGTCTGCACGAAAGCAACGACATTGGAAAACATCATCGCAGC
ACAGTCAGGAGCTTCTTGTTTTTTTCGACCGCTACTTTGCTTTCCACCTC
GTTCTTGCTCGAACGGCCTTTCGATGGGATGGGCCACGAACACACCCGTG
TCTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAATTATTGACCCTTATA
TGGGATTTAGCCACGCACTACTTCTCTTAATAAATGAAGTGACTGACTTG
GCATGGCAAGAACATGAGCTGGACATTCAGAAGGTGTATGGGCTGAAGCA
CTCATTGGAGGTGCTCCGTCAGACGCCACCTCATGGGGATATTAACTTAC
ACTCAGGACAGGAATGTATGGTCATTGCTGAAGCAAACCGCTTGGGTGCA
ATACTGCTCCTGTACGAGATATGCTCGTCTTCTGAATCAATTTCTTCATG
TTCATCATTTAGCTCGGAGGAGAAACTCCGCTATGTTCGGCAGATTCTCG
ATCTTATTCAGGCGCACAAGTCCAACATGATGCGCACTGCCGTCCTCCCT
CTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCGGACGACAACGACAG
AGTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGCCATTCGTCGGTTTG
GCCTTGCAGTTGACTTGGCTTGATGAATCAATCGCCAAGGGCGTGTGTCA
TGGGAGGGCCGGAGTATGGTCGAAGAATGGCCGGAAGAGAAAGGATGTCT
CAAATGAGCAGAGTCTGGAGATGGTGCGACATACTGTGCCTAAGGCGTCG
CACCAGCAGTGGATGTTTCTAAACACGTCCGCTGACGACGTGAACCGGCT
CTGTATGCAGTACCAAACGGTATATGGCGGGATTTTACCCAGTCATCAAC
GACGGCTGATACTATCACCCGCATTGAATACAATGCCAGCCACGGCCTCG
AATCGATCCAGAGAGGACCAAATGCTACTGGCATTCTTTGAGGCAGTCAT
TTGCAGCAGCTCAACCCTGGTCGACAATGTGCAATCGAATCCATATCGAT
ACTTGATCCTGCCCATGGCCCTCAACTCCGACGGCATCTATCATGCGGCG
TTGGCGATCTCCGCAAATACCCTGCGTCTTTCCAAAGTACAGTATCGTGT
CCCTGCTTTGGAGCACCATCATCGTGCGCTACTCTACCTCCAATCTCTTC
TAGATCGAGAGAGTTGGTCGAATTGGGAGATGGATGAGATCTTGGGGCTT
GTTTTGATGCTCTGTTGGTTTGAGATGGCTTCGGATAACCCACTCCTTTT
CTCCGCGCCAATTCCTCTCCACCTCATGGCGCCCTTGACCATCTCCCGCA
CCCGGACAGGCTGCTGGGCTTGTAGGGCCCGGAGGGTAAAGTGTGATGGT
ATTATAGTTTCCTCTTGGTTTGAAAAGCTAGTAATATCGCACCGGCAAGA
GAAGTGATAGAGATGGTCTGGCGACGCCGTGACCTTAACCAAAATGAATT
TGCCAACGGCGCCATGTCAGGGAAGACAGCGCGCTTTGAATGGGAACATG
CGATGACGATGCTTGGAGGGTTGAAGCTAGCGCTAACATAGATCTCAGAT
CATAGTCGTTCATCGTGGGTGACACACCTTAACGGGTTCCAGGATGTCAT
GTCTGCACGAAAGCAACGACATTGGAAAACATCATCGCAGCACAGTCAGG
AGCTTCTTGTTTTTTTCGACCGCTACTTTGCTTTCCACCTCGTTCTTGCT
CGAACGGCCTTTCGATGGGATGGGCCACGAACACACCCGTGTCTTTCTGC
CTTGCCTTCAAGTCCATCCTCAGAAATTATTGACCCTTATATGGGATTTA
GCCACGCACTACTTCTCTTAATAAATGAAGTGACTGACTTGGCATGGCAA
GAACATGAGCTGGACATTCAGAAGGTGTATGGGCTGAAGCACTCATTGGA
GGTGCTCCGTCAGACGCCACCTCATGGGGATATTAACTTACACTCAGGAC
AGGAATGTATGGTCATTGCTGAAGCAAACCGCTTGGGTGCAATACTGCTC
CTGTACGAGATATGCTCGTCTTCTGAATCAATTTCTTCATGTTCATCATT
TAGCTCGGAGGAGAAACTCCGCTATGTTCGGCAGATTCTCGATCTTATTC
AGGCGCACAAGTCCAACATGATGCGCACTGCCGTCCTCCCTCTATGGCCT
CTCTTCCTAGCAGGTTGCTGTGTCTCGGACGACAACGACAGAGTCATTGT
TCTGCAAATCTTCCAAGAGTGGGAGGCCATTCGTCGGTTTGGCCTTGCAG
TTGACTTGGCTTGATGAATCAATCGCCAAGGGCGTGTGTCATGGGAGGGC
CGGAGTATGGTCGAAGAATGGCCGGAAGAGAAAGGATGTCTCAAATGAGC
AGAGTCTGGAGATGGTGCGACATACTGTGCCTAAGGCGTCGCACCAGCAG
TGGATGTTTCTAAACACGTCCGCTGACGACGTGAACCGGCTCTGTATGCA
GTACCAAACGGTATATGGCGGGATTTTACCCAGTCATCAACGACGGCTGA
TACTATCACCCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCC
AGAGAGGACCAAATGCTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAG
CTCAACCCTGGTCGACAATGTGCAATCGAATCCATATCGATACTTGATCC
TGCCCATGGCCCTCAACTCCGACGGCATCTATCATGCGGCGTTGGCGATC
TCCGCAAATACCCTGCGTCTTTCCAAAGTACAGTATCGTGTCCCTGCTTT
GGAGCACCATCATCGTGCGCTACTCTACCTCCAATCTCTTCTAGATCGAG
AGAGTTGGTCGAATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATG
CTCTGTTGGTTTGAGATGGCTTCGGATAACCCACTCCTTTTCTCCGCGCC
AATTCCTCTCCACCTCATGGCGCCCTTGACCATCTCCCGCACCCGGACAG
GCTGCTGGGCTTGTAGGGCCCGGAGGGTAAAGTGTGATGGTATTATAGTT
TCCTCTTGGTTTGAAAAGCTAGTAATATCGCACCGGCAAGAGAAGTGATA
GAGATGGTCTGGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACGG
CGCCATGTCAGGGAAGACAGCGCGCTTTGAATGGGAACATGCGATGACGA
TGCTTGGAGGGTTGAAGCTAGCGCTAACATAGATCTCAGATCATAGTCGT
TCATCGTGGGTGACACACCTTAACGGGTTCCAGGATGTCATGTCTGCACG
AAAGCAACGACATTGGAAAACATCATCGCAGCACAGTCAGGAGCTTCTTG
TTTTTTTCGACCGCTACTTTGCTTTCCACCTCGTTCTTGCTCGAACGGCC
TTTCGATGGGATGGGCCACGAACACACCCGTGTCTTTCTGCCTTGCCTTC
AAGTCCATCCTCAGAAATTATTGACCCTTATATGGGATTTAGCCACGCAC
TACTTCTCTTAATAAATGAAGTGACTGACTTGGCATGGCAAGAACATGAG
CTGGACATTCAGAAGGTGTATGGGCTGAAGCACTCATTGGAGGTGCTCCG
TCAGACGCCACCTCATGGGGATATTAACTTACACTCAGGACAGGAATGTA
TGGTCATTGCTGAAGCAAACCGCTTGGGTGCAATACTGCTCCTGTACGAG
ATATGCTCGTCTTCTGAATCAATTTCTTCATGTTCATCATTTAGCTCGGA
GGAGAAACTCCGCTATGTTCGGCAGATTCTCGATCTTATTCAGGCGCACA
AGTCCAACATGATGCGCACTGCCGTCCTCCCTCTATGGCCTCTCTTCCTA
GCAGGTTGCTGTGTCTCGGACGACAACGACAGAGTCATTGTTCTGCAAAT
CTTCCAAGAGTGGGAGGCCATTCGTCGGTTTGGCCTTGCAGTTGACTTGG
CTTGATGAATCAATCGCCAAGGGCGTGTGTCATGGGAGGGCCGGAGTATG
GTCGAAGAATGGCCGGAAGAGAAAGGATGTCTCAAATGAGCAGAGTCTGG
AGATGGTGCGACATACTGTGCCTAAGGCGTCGCACCAGCAGTGGATGTTT
CTAAACACGTCCGCTGACGACGTGAACCGGCTCTGTATGCAGTACCAAAC
GGTATATGGCGGGATTTTACCCAGTCATCAACGACGGCTGATACTATCAC
CCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGAGAGGAC
CAAATGCTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTCAACCCT
GGTCGACAATGTGCAATCGAATCCATATCGATACTTGATCCTGCCCATGG
CCCTCAACTCCGACGGCATCTATCATGCGGCGTTGGCGATCTCCGCAAAT
ACCCTGCGTCTTTCCAAAGTACAGTATCGTGTCCCTGCTTTGGAGCACCA
TCATCGTGCGCTACTCTACCTCCAATCTCTTCTAGATCGAGAGAGTTGGT
CGAATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCTGTTGG
TTTGAGATGGCTTCGGATAACCCACTCCTTTTCTCCGCGCCAATTCCTCT
CCACCTCATGGCGCCCTTGACCATCTCCCGCACCCGGACAGGCTGCTGGG
CTTGTAGGGCCCGGAGGGTAAAGTGTGATGGTATTATAGTTTCCTCTTGG
TTTGAAAAGCTAGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001687ATCC10864_001687Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001687-T1ATCC10864_001687-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001687-T1.cdsATCC10864_001687-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001687-T1.exon4ATCC10864_001687-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001687-T1.exon3ATCC10864_001687-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001687-T1.exon2ATCC10864_001687-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001687-T1.exon1ATCC10864_001687-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF11951
InterProIPR001138
InterProIPR021858
InterProIPR036864
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:118393..120215 -
Powered by Drupal