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ATCC10864_001713-T1, ATCC10864_001713-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001713-T1
Unique NameATCC10864_001713-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:194718..195534-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001713-T1 ID=ATCC10864_001713-T1|Name=ATCC10864_001713-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=817bp|location=Sequence derived from alignment at MCQH01000029:194718..195534- (Aspergillus niger ATCC 10864)
ATGACTTCCCGCCTGGTTCTGGTCATTGGTGACCTCTTCATCCCCGACAG
AGCCCCCGTACGCATCCCCTCATCCCTTATCGCATCCTCGCAGGTTGACC
TGTCTGCTGACTTGTACTCGCTAGGACCTCCCAGCCAAGGTGCGCACTAT
TGCTCCATCCCTCTTGATCCTCCTCTCTGTCTTTCAATCCCCCGTTCTCG
ATTGACCCGCGCACAGTTCCGGAAACTCCTGACGCCAGGCAAGATCGGCC
AGATCCTCTGTCTCGGCAATCTCACCGATCGGAGCACTTTCGAATTCCTC
CGACAGGTCGCTCCAGACTTGCAATTGGTCAAAGGCGACTTCGATGTCGA
TTCCCCCAACCTACCCCTCTCTAAAGTGGTGACTCACGGGAGTCTCCGCA
TCGGATTTACTCATGGCCACACCATCATCCCGCCGGGGGACGCCGATGCC
CTTCTGATCGCTGCCCGCCAGATGGATGTTGACATACTGCTATGGGGTGG
AACCCACCGCTTTGAAGCTTTTGAACTGGAGGGAAGGTTCTTTATCAACC
CGGGAAGTGCCACCGGTGCCATGAGCACGGGGTACTGGCCGGAAGGGGAA
GAGCCGACACCTAGTTTCTGTTTGATGGATGTAAGTCGCGCAACTCCACG
GGGTTCGCTGCAAGACTCGGTACGTGCTCTATGCTAACACAGGATTATAG
ATCCAAGGCGATGTCCTCGTGTTGTATGTTTACCAACTGAAGACGGACGC
CGACGGGGTTGAGACGGTCGCGGTCGAGAAAGTATCTTACCGCAAGAACA
ATATCCCTTCTTCATGA
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Coding sequence (CDS) from alignment at MCQH01000029:194718..195534-

>ATCC10864_001713-T1 ID=ATCC10864_001713-T1|Name=ATCC10864_001713-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1494bp|location=Sequence derived from alignment at MCQH01000029:194718..195534- (Aspergillus niger ATCC 10864)
ATCCAAGGCGATGTCCTCGTGTTGTATGTTTACCAACTGAAGACGGACGC
CGACGGGGTTGAGACGGTCGCGGTCGAGAAAGTATCTTACCGCAAGAACA
ATATCCCTTCTTCATGAATGACTTCCCGCCTGGTTCTGGTCATTGGTGAC
CTCTTCATCCCCGACAGAGCCCCCGTACGCATCCCCTCATCCCTTATCGC
ATCCTCGCAGGTTGACCTGTCTGCTGACTTGTACTCGCTAGGACCTCCCA
GCCAAGGTGCGCACTATTGCTCCATCCCTCTTGATCCTCCTCTCTGTCTT
TCAATCCCCCGTTCTCGATTGACCCGCGCACAGTTCCGGAAACTCCTGAC
GCCAGGCAAGATCGGCCAGATCCTCTGTCTCGGCAATCTCACCGATCGGA
GCACTTTCGAATTCCTCCGACAGGTCGCTCCAGACTTGCAATTGGTCAAA
GGCGACTTCGATGTCGATTCCCCCAACCTACCCCTCTCTAAAGTGGTGAC
TCACGGGAGTCTCCGCATCGGATTTACTCATGGCCACACCATCATCCCGC
CGGGGGACGCCGATGCCCTTCTGATCGCTGCCCGCCAGATGGATGTTGAC
ATACTGCTATGGGGTGGAACCCACCGCTTTGAAGCTTTTGAACTGGAGGG
AAGGTTCTTTATCAACCCGGGAAGTGCCACCGGTGCCATGAGCACGGGGT
ACTGGCCGGAAGGGGAAGAGCCGACACCTAGTTTCTGTTTGATGGATATC
CAAGGCGATGTCCTCGTGTTGTATGTTTACCAACTGAAGACGGACGCCGA
CGGGGTTGAGACGGTCGCGGTCGAGAAAGTATCTTACCGCAAGAACAATA
TCCCTTCTTCATGAATGACTTCCCGCCTGGTTCTGGTCATTGGTGACCTC
TTCATCCCCGACAGAGCCCCCGTACGCATCCCCTCATCCCTTATCGCATC
CTCGCAGGTTGACCTGTCTGCTGACTTGTACTCGCTAGGACCTCCCAGCC
AAGGTGCGCACTATTGCTCCATCCCTCTTGATCCTCCTCTCTGTCTTTCA
ATCCCCCGTTCTCGATTGACCCGCGCACAGTTCCGGAAACTCCTGACGCC
AGGCAAGATCGGCCAGATCCTCTGTCTCGGCAATCTCACCGATCGGAGCA
CTTTCGAATTCCTCCGACAGGTCGCTCCAGACTTGCAATTGGTCAAAGGC
GACTTCGATGTCGATTCCCCCAACCTACCCCTCTCTAAAGTGGTGACTCA
CGGGAGTCTCCGCATCGGATTTACTCATGGCCACACCATCATCCCGCCGG
GGGACGCCGATGCCCTTCTGATCGCTGCCCGCCAGATGGATGTTGACATA
CTGCTATGGGGTGGAACCCACCGCTTTGAAGCTTTTGAACTGGAGGGAAG
GTTCTTTATCAACCCGGGAAGTGCCACCGGTGCCATGAGCACGGGGTACT
GGCCGGAAGGGGAAGAGCCGACACCTAGTTTCTGTTTGATGGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030904retromer complex
Vocabulary: Biological Process
TermDefinition
GO:0042147retrograde transport, endosome to Golgi
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001713ATCC10864_001713Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001713-T1ATCC10864_001713-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001713-T1.cdsATCC10864_001713-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001713-T1.exon2ATCC10864_001713-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001713-T1.exon1ATCC10864_001713-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR028661
PFAMPF12850
InterProIPR024654
InterProIPR029052
InterProIPR000979
Properties
Property NameValue
NoteBUSCO:EOG092640ZF
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:194718..195534 -
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