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ATCC10864_001718-T1, ATCC10864_001718-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001718-T1
Unique NameATCC10864_001718-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:205427..206057-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001718-T1 ID=ATCC10864_001718-T1|Name=ATCC10864_001718-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=631bp|location=Sequence derived from alignment at MCQH01000029:205427..206057- (Aspergillus niger ATCC 10864)
ATGGGTAAGGGACAGCCCCGTGGTTTGAACGCCGCCCGCAAGCTCGCGAC
CACCCGTCGCGAGAACCGCTGGGCCGATCTGCACTACAAGAAGCGCCTCC
TCGGTACTGCCTACAAGTCCTCTCCCTTCGGAGGTGCCTCCCACGCCAAG
GGTATCGTTCTTGAGAAGGTCGGTGTTGAGGCCAAGCAGCCCAACTCCGC
TATTCGCAAGTGTGTCAAGGTCCAGCTCATCAAGAACGGCAAGAAGGTTA
CCGCTTTCGGTGGGTGATCCTATCCTTTTCTTTTTCTATTTCCCGGTTGT
GATGGATGTTTATGGTTTGGGGATTTTGTGATGGGATATTGTGCGGAGAA
TGGAGCAGAAGAAGGAGAAGGGAATAAAGGACGGAGTGGCAAACGGGAAA
TATCGCATATTCTTTAAGAGGGTATCGATTGGCTAACATATTTCCTGTAT
AGTCCCCAACGATGGTTGCTTGAACTTCATCGATGAGAACGACGAGGTCC
TCCTCGCCGGTTTCGGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGT
GTCCGTTTCAAGGTCGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTG
GAAGGAGAAGAAGGAGAAGCCCCGCTCTTAA
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Coding sequence (CDS) from alignment at MCQH01000029:205427..206057-

>ATCC10864_001718-T1 ID=ATCC10864_001718-T1|Name=ATCC10864_001718-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=876bp|location=Sequence derived from alignment at MCQH01000029:205427..206057- (Aspergillus niger ATCC 10864)
TCCCCAACGATGGTTGCTTGAACTTCATCGATGAGAACGACGAGGTCCTC
CTCGCCGGTTTCGGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGTGT
CCGTTTCAAGGTCGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTGGA
AGGAGAAGAAGGAGAAGCCCCGCTCTTAAATGGGTAAGGGACAGCCCCGT
GGTTTGAACGCCGCCCGCAAGCTCGCGACCACCCGTCGCGAGAACCGCTG
GGCCGATCTGCACTACAAGAAGCGCCTCCTCGGTACTGCCTACAAGTCCT
CTCCCTTCGGAGGTGCCTCCCACGCCAAGGGTATCGTTCTTGAGAAGGTC
GGTGTTGAGGCCAAGCAGCCCAACTCCGCTATTCGCAAGTGTGTCAAGGT
CCAGCTCATCAAGAACGGCAAGAAGGTTACCGCTTTCGTCCCCAACGATG
GTTGCTTGAACTTCATCGATGAGAACGACGAGGTCCTCCTCGCCGGTTTC
GGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGTGTCCGTTTCAAGGT
CGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTGGAAGGAGAAGAAGG
AGAAGCCCCGCTCTTAAATGGGTAAGGGACAGCCCCGTGGTTTGAACGCC
GCCCGCAAGCTCGCGACCACCCGTCGCGAGAACCGCTGGGCCGATCTGCA
CTACAAGAAGCGCCTCCTCGGTACTGCCTACAAGTCCTCTCCCTTCGGAG
GTGCCTCCCACGCCAAGGGTATCGTTCTTGAGAAGGTCGGTGTTGAGGCC
AAGCAGCCCAACTCCGCTATTCGCAAGTGTGTCAAGGTCCAGCTCATCAA
GAACGGCAAGAAGGTTACCGCTTTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS23ATCC10864_001718Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001718-T1ATCC10864_001718-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001718-T1.cdsATCC10864_001718-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001718-T1.exon2ATCC10864_001718-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001718-T1.exon1ATCC10864_001718-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005680
PFAMPF00164
InterProIPR012340
InterProIPR006032
Properties
Property NameValue
Product40S ribosomal protein S23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:205427..206057 -
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