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ATCC10864_001738-T1, ATCC10864_001738-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001738-T1
Unique NameATCC10864_001738-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:246009..247431-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001738-T1 ID=ATCC10864_001738-T1|Name=ATCC10864_001738-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1423bp|location=Sequence derived from alignment at MCQH01000029:246009..247431- (Aspergillus niger ATCC 10864)
ATGTCGGAAGAAGACAAGACTGTAGGTTGTCCTCTATATCCGCTCCTTAT
ACCTCATGCCGGCCACTCACTAGCAGCCAGACCCCCAATAAACTCTCCAC
TGGACCACTCAGTCCCAAACCCGAGTCGCCGACTACCGCGCGCCCTCTAG
ATTTTGATGATGAACCTCAGGAAACCGGTGTCACTGCAGCACCGTCAACA
GCCCCTGCTCAGCAGGGCGCTGCGGAAGCTGCCCCGCCTAAGCCACCCCG
CCCATTGAGCCCCCGGCAAGAGGCCGAGAATACCCTCAAGGAAGCATTCC
CCTCTATCGAGGCATCGGTGATCAAAGCAGTGTTGGTGGCCAGTAACTGG
GATGTGGAACGGTCATTCCATGCTTTGCTTAGTACGTGTGAACTGCGACG
GAAAGCACTGCTATGCGCGGTCACTAACAAGTCCCTCTAGGCATGACGGA
TCCCAGTGCTGTCGAACAAGATGCGCCGCCCCCGAAGCCACCACGCCCAA
CTGCTGCGCAGAGGCAGCTAGAAGCAGATGAGATGTATGCCCGTCAGCTG
GCCGAGCACTACAACCGTCCTGCGCGCCAACCCCGTTGGGACAACGAGTA
CCCACAGCAGCGGCCACGAAGAGGAAGCGATGGATCGGAGGAAAAAGAAT
ACAGCTTTTTCGATGGTCAGTGATATGGATCTTTTCTACGTCATCTTGGT
CGCTAAATAATGGCCTGTATAGATGATCTCCCTGTGATCCGTGAGAACCT
TCGCAAAGGATTCTTGGATACCCAGACGAAGGTCAACTCGTGGGTCCAGA
ATCTGAAGAAACGCCTCGATGGCGAAACACCTGAGGCCGGACCTTCTGGT
CAAGGCCAGCCCGATGAGAACTATGGTAGACCTAGACGGAGCGGGGACCT
AGGTCGTCGGAGCGGCGATCGCGAACGCTACGATGCCGATCATCGCATCC
TGAACGACGACTTTTCCTCACTTGAACTGAGAGATGCGGAAGGTACGGTT
ACCCCGATCAGACCCTGATCATGCATCAAATTCGCTAGCGAATGCTAACC
TCCGTTCGCAGCTCCTCCTCCGCGCCCCCCGCGCCCTCTCGCCAATCCCG
ATCTTTTCAAAACCTCTTCATCTTCCCCTGATCGACGCAAGGTCTCCTTC
CAGGAGGGACCACCTACCGAGATTGACAACCTCTACGATGCCTCTGAGCC
CGTCAGACGTACGTCTCCCGCGACAGGCAAGTCGAGCAAGTGGCAACCTC
TGTCGACTGTTGACCCTTCGCCGGTCGGGGAACATGACCCGTTCAGTCTT
GGGGACAGTGACGATGAGAAAGAAAAGGAAGCCAAGACTAAGGAGCAGAG
CACAGCTGAGGCTGGGCCGGCCAGCGAAGCGTCGAAAGACAGCAGCAAGG
CCGAGAATGCTGGCAAGTCGTAG
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Coding sequence (CDS) from alignment at MCQH01000029:246009..247431-

>ATCC10864_001738-T1 ID=ATCC10864_001738-T1|Name=ATCC10864_001738-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5895bp|location=Sequence derived from alignment at MCQH01000029:246009..247431- (Aspergillus niger ATCC 10864)
CTCCTCCTCCGCGCCCCCCGCGCCCTCTCGCCAATCCCGATCTTTTCAAA
ACCTCTTCATCTTCCCCTGATCGACGCAAGGTCTCCTTCCAGGAGGGACC
ACCTACCGAGATTGACAACCTCTACGATGCCTCTGAGCCCGTCAGACGTA
CGTCTCCCGCGACAGGCAAGTCGAGCAAGTGGCAACCTCTGTCGACTGTT
GACCCTTCGCCGGTCGGGGAACATGACCCGTTCAGTCTTGGGGACAGTGA
CGATGAGAAAGAAAAGGAAGCCAAGACTAAGGAGCAGAGCACAGCTGAGG
CTGGGCCGGCCAGCGAAGCGTCGAAAGACAGCAGCAAGGCCGAGAATGCT
GGCAAGTCGTAGATGATCTCCCTGTGATCCGTGAGAACCTTCGCAAAGGA
TTCTTGGATACCCAGACGAAGGTCAACTCGTGGGTCCAGAATCTGAAGAA
ACGCCTCGATGGCGAAACACCTGAGGCCGGACCTTCTGGTCAAGGCCAGC
CCGATGAGAACTATGGTAGACCTAGACGGAGCGGGGACCTAGGTCGTCGG
AGCGGCGATCGCGAACGCTACGATGCCGATCATCGCATCCTGAACGACGA
CTTTTCCTCACTTGAACTGAGAGATGCGGAAGGCATGACGGATCCCAGTG
CTGTCGAACAAGATGCGCCGCCCCCGAAGCCACCACGCCCAACTGCTGCG
CAGAGGCAGCTAGAAGCAGATGAGATGTATGCCCGTCAGCTGGCCGAGCA
CTACAACCGTCCTGCGCGCCAACCCCGTTGGGACAACGAGTACCCACAGC
AGCGGCCACGAAGAGGAAGCGATGGATCGGAGGAAAAAGAATACAGCTTT
TTCGATGACCCCCAATAAACTCTCCACTGGACCACTCAGTCCCAAACCCG
AGTCGCCGACTACCGCGCGCCCTCTAGATTTTGATGATGAACCTCAGGAA
ACCGGTGTCACTGCAGCACCGTCAACAGCCCCTGCTCAGCAGGGCGCTGC
GGAAGCTGCCCCGCCTAAGCCACCCCGCCCATTGAGCCCCCGGCAAGAGG
CCGAGAATACCCTCAAGGAAGCATTCCCCTCTATCGAGGCATCGGTGATC
AAAGCAGTGTTGGTGGCCAGTAACTGGGATGTGGAACGGTCATTCCATGC
TTTGCTTAATGTCGGAAGAAGACAAGACTCTCCTCCTCCGCGCCCCCCGC
GCCCTCTCGCCAATCCCGATCTTTTCAAAACCTCTTCATCTTCCCCTGAT
CGACGCAAGGTCTCCTTCCAGGAGGGACCACCTACCGAGATTGACAACCT
CTACGATGCCTCTGAGCCCGTCAGACGTACGTCTCCCGCGACAGGCAAGT
CGAGCAAGTGGCAACCTCTGTCGACTGTTGACCCTTCGCCGGTCGGGGAA
CATGACCCGTTCAGTCTTGGGGACAGTGACGATGAGAAAGAAAAGGAAGC
CAAGACTAAGGAGCAGAGCACAGCTGAGGCTGGGCCGGCCAGCGAAGCGT
CGAAAGACAGCAGCAAGGCCGAGAATGCTGGCAAGTCGTAGATGATCTCC
CTGTGATCCGTGAGAACCTTCGCAAAGGATTCTTGGATACCCAGACGAAG
GTCAACTCGTGGGTCCAGAATCTGAAGAAACGCCTCGATGGCGAAACACC
TGAGGCCGGACCTTCTGGTCAAGGCCAGCCCGATGAGAACTATGGTAGAC
CTAGACGGAGCGGGGACCTAGGTCGTCGGAGCGGCGATCGCGAACGCTAC
GATGCCGATCATCGCATCCTGAACGACGACTTTTCCTCACTTGAACTGAG
AGATGCGGAAGGCATGACGGATCCCAGTGCTGTCGAACAAGATGCGCCGC
CCCCGAAGCCACCACGCCCAACTGCTGCGCAGAGGCAGCTAGAAGCAGAT
GAGATGTATGCCCGTCAGCTGGCCGAGCACTACAACCGTCCTGCGCGCCA
ACCCCGTTGGGACAACGAGTACCCACAGCAGCGGCCACGAAGAGGAAGCG
ATGGATCGGAGGAAAAAGAATACAGCTTTTTCGATGACCCCCAATAAACT
CTCCACTGGACCACTCAGTCCCAAACCCGAGTCGCCGACTACCGCGCGCC
CTCTAGATTTTGATGATGAACCTCAGGAAACCGGTGTCACTGCAGCACCG
TCAACAGCCCCTGCTCAGCAGGGCGCTGCGGAAGCTGCCCCGCCTAAGCC
ACCCCGCCCATTGAGCCCCCGGCAAGAGGCCGAGAATACCCTCAAGGAAG
CATTCCCCTCTATCGAGGCATCGGTGATCAAAGCAGTGTTGGTGGCCAGT
AACTGGGATGTGGAACGGTCATTCCATGCTTTGCTTAATGTCGGAAGAAG
ACAAGACTCTCCTCCTCCGCGCCCCCCGCGCCCTCTCGCCAATCCCGATC
TTTTCAAAACCTCTTCATCTTCCCCTGATCGACGCAAGGTCTCCTTCCAG
GAGGGACCACCTACCGAGATTGACAACCTCTACGATGCCTCTGAGCCCGT
CAGACGTACGTCTCCCGCGACAGGCAAGTCGAGCAAGTGGCAACCTCTGT
CGACTGTTGACCCTTCGCCGGTCGGGGAACATGACCCGTTCAGTCTTGGG
GACAGTGACGATGAGAAAGAAAAGGAAGCCAAGACTAAGGAGCAGAGCAC
AGCTGAGGCTGGGCCGGCCAGCGAAGCGTCGAAAGACAGCAGCAAGGCCG
AGAATGCTGGCAAGTCGTAGATGATCTCCCTGTGATCCGTGAGAACCTTC
GCAAAGGATTCTTGGATACCCAGACGAAGGTCAACTCGTGGGTCCAGAAT
CTGAAGAAACGCCTCGATGGCGAAACACCTGAGGCCGGACCTTCTGGTCA
AGGCCAGCCCGATGAGAACTATGGTAGACCTAGACGGAGCGGGGACCTAG
GTCGTCGGAGCGGCGATCGCGAACGCTACGATGCCGATCATCGCATCCTG
AACGACGACTTTTCCTCACTTGAACTGAGAGATGCGGAAGGCATGACGGA
TCCCAGTGCTGTCGAACAAGATGCGCCGCCCCCGAAGCCACCACGCCCAA
CTGCTGCGCAGAGGCAGCTAGAAGCAGATGAGATGTATGCCCGTCAGCTG
GCCGAGCACTACAACCGTCCTGCGCGCCAACCCCGTTGGGACAACGAGTA
CCCACAGCAGCGGCCACGAAGAGGAAGCGATGGATCGGAGGAAAAAGAAT
ACAGCTTTTTCGATGACCCCCAATAAACTCTCCACTGGACCACTCAGTCC
CAAACCCGAGTCGCCGACTACCGCGCGCCCTCTAGATTTTGATGATGAAC
CTCAGGAAACCGGTGTCACTGCAGCACCGTCAACAGCCCCTGCTCAGCAG
GGCGCTGCGGAAGCTGCCCCGCCTAAGCCACCCCGCCCATTGAGCCCCCG
GCAAGAGGCCGAGAATACCCTCAAGGAAGCATTCCCCTCTATCGAGGCAT
CGGTGATCAAAGCAGTGTTGGTGGCCAGTAACTGGGATGTGGAACGGTCA
TTCCATGCTTTGCTTAATGTCGGAAGAAGACAAGACTCTCCTCCTCCGCG
CCCCCCGCGCCCTCTCGCCAATCCCGATCTTTTCAAAACCTCTTCATCTT
CCCCTGATCGACGCAAGGTCTCCTTCCAGGAGGGACCACCTACCGAGATT
GACAACCTCTACGATGCCTCTGAGCCCGTCAGACGTACGTCTCCCGCGAC
AGGCAAGTCGAGCAAGTGGCAACCTCTGTCGACTGTTGACCCTTCGCCGG
TCGGGGAACATGACCCGTTCAGTCTTGGGGACAGTGACGATGAGAAAGAA
AAGGAAGCCAAGACTAAGGAGCAGAGCACAGCTGAGGCTGGGCCGGCCAG
CGAAGCGTCGAAAGACAGCAGCAAGGCCGAGAATGCTGGCAAGTCGTAGA
TGATCTCCCTGTGATCCGTGAGAACCTTCGCAAAGGATTCTTGGATACCC
AGACGAAGGTCAACTCGTGGGTCCAGAATCTGAAGAAACGCCTCGATGGC
GAAACACCTGAGGCCGGACCTTCTGGTCAAGGCCAGCCCGATGAGAACTA
TGGTAGACCTAGACGGAGCGGGGACCTAGGTCGTCGGAGCGGCGATCGCG
AACGCTACGATGCCGATCATCGCATCCTGAACGACGACTTTTCCTCACTT
GAACTGAGAGATGCGGAAGGCATGACGGATCCCAGTGCTGTCGAACAAGA
TGCGCCGCCCCCGAAGCCACCACGCCCAACTGCTGCGCAGAGGCAGCTAG
AAGCAGATGAGATGTATGCCCGTCAGCTGGCCGAGCACTACAACCGTCCT
GCGCGCCAACCCCGTTGGGACAACGAGTACCCACAGCAGCGGCCACGAAG
AGGAAGCGATGGATCGGAGGAAAAAGAATACAGCTTTTTCGATGACCCCC
AATAAACTCTCCACTGGACCACTCAGTCCCAAACCCGAGTCGCCGACTAC
CGCGCGCCCTCTAGATTTTGATGATGAACCTCAGGAAACCGGTGTCACTG
CAGCACCGTCAACAGCCCCTGCTCAGCAGGGCGCTGCGGAAGCTGCCCCG
CCTAAGCCACCCCGCCCATTGAGCCCCCGGCAAGAGGCCGAGAATACCCT
CAAGGAAGCATTCCCCTCTATCGAGGCATCGGTGATCAAAGCAGTGTTGG
TGGCCAGTAACTGGGATGTGGAACGGTCATTCCATGCTTTGCTTAATGTC
GGAAGAAGACAAGACTCTCCTCCTCCGCGCCCCCCGCGCCCTCTCGCCAA
TCCCGATCTTTTCAAAACCTCTTCATCTTCCCCTGATCGACGCAAGGTCT
CCTTCCAGGAGGGACCACCTACCGAGATTGACAACCTCTACGATGCCTCT
GAGCCCGTCAGACGTACGTCTCCCGCGACAGGCAAGTCGAGCAAGTGGCA
ACCTCTGTCGACTGTTGACCCTTCGCCGGTCGGGGAACATGACCCGTTCA
GTCTTGGGGACAGTGACGATGAGAAAGAAAAGGAAGCCAAGACTAAGGAG
CAGAGCACAGCTGAGGCTGGGCCGGCCAGCGAAGCGTCGAAAGACAGCAG
CAAGGCCGAGAATGCTGGCAAGTCGTAGATGATCTCCCTGTGATCCGTGA
GAACCTTCGCAAAGGATTCTTGGATACCCAGACGAAGGTCAACTCGTGGG
TCCAGAATCTGAAGAAACGCCTCGATGGCGAAACACCTGAGGCCGGACCT
TCTGGTCAAGGCCAGCCCGATGAGAACTATGGTAGACCTAGACGGAGCGG
GGACCTAGGTCGTCGGAGCGGCGATCGCGAACGCTACGATGCCGATCATC
GCATCCTGAACGACGACTTTTCCTCACTTGAACTGAGAGATGCGGAAGGC
ATGACGGATCCCAGTGCTGTCGAACAAGATGCGCCGCCCCCGAAGCCACC
ACGCCCAACTGCTGCGCAGAGGCAGCTAGAAGCAGATGAGATGTATGCCC
GTCAGCTGGCCGAGCACTACAACCGTCCTGCGCGCCAACCCCGTTGGGAC
AACGAGTACCCACAGCAGCGGCCACGAAGAGGAAGCGATGGATCGGAGGA
AAAAGAATACAGCTTTTTCGATGACCCCCAATAAACTCTCCACTGGACCA
CTCAGTCCCAAACCCGAGTCGCCGACTACCGCGCGCCCTCTAGATTTTGA
TGATGAACCTCAGGAAACCGGTGTCACTGCAGCACCGTCAACAGCCCCTG
CTCAGCAGGGCGCTGCGGAAGCTGCCCCGCCTAAGCCACCCCGCCCATTG
AGCCCCCGGCAAGAGGCCGAGAATACCCTCAAGGAAGCATTCCCCTCTAT
CGAGGCATCGGTGATCAAAGCAGTGTTGGTGGCCAGTAACTGGGATGTGG
AACGGTCATTCCATGCTTTGCTTAATGTCGGAAGAAGACAAGACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043130ubiquitin binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001738ATCC10864_001738Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001738-T1ATCC10864_001738-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001738-T1.cdsATCC10864_001738-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001738-T1.exon5ATCC10864_001738-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_001738-T1.exon4ATCC10864_001738-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001738-T1.exon3ATCC10864_001738-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001738-T1.exon2ATCC10864_001738-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001738-T1.exon1ATCC10864_001738-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR041807
InterProIPR009060
InterProIPR003892
PFAMPF02845
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:246009..247431 -
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