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ATCC10864_001753-T1, ATCC10864_001753-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001753-T1
Unique NameATCC10864_001753-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:280531..281804-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001753-T1 ID=ATCC10864_001753-T1|Name=ATCC10864_001753-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1274bp|location=Sequence derived from alignment at MCQH01000029:280531..281804- (Aspergillus niger ATCC 10864)
ATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCCCGAGAATGGTGA
GCATTCGATTATTCCCCGATCTTTGTCGCTCTGTTCGCTGGGTGGACGCG
GAGGAGGATCTGGCCGGAGGGACAGGCATGGCATCGAGGATTCTGGGGGA
CTTTTAGGAGGTTGAGGATAGCGCTGCGCCAGCTACAACCGGCAATCGCT
AGGGGGAGAGAATAAAAGAAAGAGAGATGCTACACTGAATGCCTGTCCCT
GCGATCTATTGCGATTCAATTTTGCGTGATATGATAGAAAAGGACATGGG
ACTGATTCGAATTTCCTCCTACAGTGAAGGTTCACATTCGCTCGCGCATT
GTGACCGTTGAGGGACCCCGAGGTATGCAAATTTTCCAACAATCCACCAC
GACCCGGCCATTTGGAACAATATCGACCAATATGTTCCTCGTGGCGTGTT
GTGACCTACGGCTCGAGCTATGTGCCGCACCCGTCTGTATTCAGCGACAC
TAACATGGGTCCTTTTTCCCCCTCTTACAGGCAAACTCGTCAAGGACCTC
TCCCACATTGCCGTCACCTTCGGCCGCCCCGAGAAGAATGTCATCTCCAT
TGAGATGCACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGTCC
GCACCCTCATCAACAACCTGATCATCGGTGTCACCAAGGGCTTCAAGTAC
AAGATGCGCTACGTCTACGCTCACTTTCCCATCAACGTCAACATTGAGAA
GAACCCCGAGACCGGTCTGCACGACGTTGAGATCAGGTATGCCGAAATCA
ATTCACTCGCACACGCATCGAAGACTGGGGGATGAGCCGGGATCAAACCA
AAGGATTATTCTCTTTCCTTTTCCCGGTTGGGTTCTGGCTTCTACCTACC
AGTGCTTGGTCAATTATCATGTTTTTGGGAGGAGACATTTTGCTGATGGG
TATTGCGTTTTACAGAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTGA
CCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATGAG
CTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCGA
CATCCAGCAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGGTAAGAA
AAATGCCGCCTCCCTTTGGTTTCTCGTGAGAGAAAATATCGAGACCGTTA
CTGACATGAATGATTTTGCACAGTTCCTTGACGGTCTGTACGTGTCGGAG
CGTGGTAACATTGTCGAGGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000029:280531..281804-

>ATCC10864_001753-T1 ID=ATCC10864_001753-T1|Name=ATCC10864_001753-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2895bp|location=Sequence derived from alignment at MCQH01000029:280531..281804- (Aspergillus niger ATCC 10864)
TTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTAACATTGTCGAGGAGTA
AAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTGACCGCCCAGCCTGGC
GTTGAGGTCATCACCTCTCCCAACGTCAAGGATGAGCTCGTCCTCTCCGG
TAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCGACATCCAGCAGATCT
GCCGTGTCCGCAACAAGGATATCCGTAAGGCAAACTCGTCAAGGACCTCT
CCCACATTGCCGTCACCTTCGGCCGCCCCGAGAAGAATGTCATCTCCATT
GAGATGCACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGTCCG
CACCCTCATCAACAACCTGATCATCGGTGTCACCAAGGGCTTCAAGTACA
AGATGCGCTACGTCTACGCTCACTTTCCCATCAACGTCAACATTGAGAAG
AACCCCGAGACCGGTCTGCACGACGTTGAGATCAGTGAAGGTTCACATTC
GCTCGCGCATTGTGACCGTTGAGGGACCCCGAGATGCGGTACATTTACTC
CGAGGAACGGCTGCCCATCCCCGAGAATGTTCCTTGACGGTCTGTACGTG
TCGGAGCGTGGTAACATTGTCGAGGAGTAAAAACTTCTTGGGTGAGAAGT
ACGTCCGCCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCC
AACGTCAAGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTC
CCAGAGTGCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATA
TCCGTAAGGCAAACTCGTCAAGGACCTCTCCCACATTGCCGTCACCTTCG
GCCGCCCCGAGAAGAATGTCATCTCCATTGAGATGCACCACGGTGTCCGC
AAGGGAATGGCTTCCCTTCGTACCGTCCGCACCCTCATCAACAACCTGAT
CATCGGTGTCACCAAGGGCTTCAAGTACAAGATGCGCTACGTCTACGCTC
ACTTTCCCATCAACGTCAACATTGAGAAGAACCCCGAGACCGGTCTGCAC
GACGTTGAGATCAGTGAAGGTTCACATTCGCTCGCGCATTGTGACCGTTG
AGGGACCCCGAGATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCC
CGAGAATGTTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTAACATTGTC
GAGGAGTAAAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTGACCGCCC
AGCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATGAGCTCGTC
CTCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCGACATCCA
GCAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGGCAAACTCGTCAA
GGACCTCTCCCACATTGCCGTCACCTTCGGCCGCCCCGAGAAGAATGTCA
TCTCCATTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGT
ACCGTCCGCACCCTCATCAACAACCTGATCATCGGTGTCACCAAGGGCTT
CAAGTACAAGATGCGCTACGTCTACGCTCACTTTCCCATCAACGTCAACA
TTGAGAAGAACCCCGAGACCGGTCTGCACGACGTTGAGATCAGTGAAGGT
TCACATTCGCTCGCGCATTGTGACCGTTGAGGGACCCCGAGATGCGGTAC
ATTTACTCCGAGGAACGGCTGCCCATCCCCGAGAATGTTCCTTGACGGTC
TGTACGTGTCGGAGCGTGGTAACATTGTCGAGGAGTAAAAACTTCTTGGG
TGAGAAGTACGTCCGCCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCA
CCTCTCCCAACGTCAAGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAG
GGTGTCTCCCAGAGTGCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAA
CAAGGATATCCGTAAGGCAAACTCGTCAAGGACCTCTCCCACATTGCCGT
CACCTTCGGCCGCCCCGAGAAGAATGTCATCTCCATTGAGATGCACCACG
GTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGTCCGCACCCTCATCAAC
AACCTGATCATCGGTGTCACCAAGGGCTTCAAGTACAAGATGCGCTACGT
CTACGCTCACTTTCCCATCAACGTCAACATTGAGAAGAACCCCGAGACCG
GTCTGCACGACGTTGAGATCAGTGAAGGTTCACATTCGCTCGCGCATTGT
GACCGTTGAGGGACCCCGAGATGCGGTACATTTACTCCGAGGAACGGCTG
CCCATCCCCGAGAATGTTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTA
ACATTGTCGAGGAGTAAAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGT
GACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATG
AGCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCC
GACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGGCAAA
CTCGTCAAGGACCTCTCCCACATTGCCGTCACCTTCGGCCGCCCCGAGAA
GAATGTCATCTCCATTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTT
CCCTTCGTACCGTCCGCACCCTCATCAACAACCTGATCATCGGTGTCACC
AAGGGCTTCAAGTACAAGATGCGCTACGTCTACGCTCACTTTCCCATCAA
CGTCAACATTGAGAAGAACCCCGAGACCGGTCTGCACGACGTTGAGATCA
GTGAAGGTTCACATTCGCTCGCGCATTGTGACCGTTGAGGGACCCCGAGA
TGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCCCGAGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL9BATCC10864_001753Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001753-T1ATCC10864_001753-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001753-T1.cdsATCC10864_001753-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001753-T1.exon5ATCC10864_001753-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_001753-T1.exon4ATCC10864_001753-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001753-T1.exon3ATCC10864_001753-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001753-T1.exon2ATCC10864_001753-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001753-T1.exon1ATCC10864_001753-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002359
InterProIPR000702
InterProIPR020040
PFAMPF00347
InterProIPR036789
Properties
Property NameValue
Product60S ribosomal protein L9B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:280531..281804 -
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