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ATCC10864_001761-T1, ATCC10864_001761-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001761-T1
Unique NameATCC10864_001761-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:307175..308322+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001761-T1 ID=ATCC10864_001761-T1|Name=ATCC10864_001761-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1148bp|location=Sequence derived from alignment at MCQH01000029:307175..308322+ (Aspergillus niger ATCC 10864)
ATGTCGCTTTTCGGTTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGAC
CAACACCACAGGTGATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCG
AGGACAGTATTTCGGACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCT
GTAGCCTCATGGGACAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGG
CCAGAGCGAAGGTAAAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCT
GTTGCTGGTCGCCGGTGAGCTCGTCCTCATTTTCTTGTCGCAGTATCTAC
AGTTAACTGATATGGACTCTGCTGCTACCTAGGATGGTACGAAAGTGGTC
GGAGCTGGCGCCGACAAAGCCGCTCGGATGCTCGACCTTGCAACCAATGC
GACCACTCAAGTCGCCGCTCACGATGCGCCCATCAAATGCTGCCACATGA
TCCCAAACCCGGCTGGAGGGAGCCCGCTACTCGTGACCGGTTCTTGGGAC
AAGACCATCAAGTATTGGGACTTGCGACAGTCAAACCCCATCGCCTCGGT
GGAGTGCCAGGAGCGTGTTTACACCATGGATGTCAAGGACAAACTCCTCG
TGGTCGGCACCGCAGACCGCTATATCAACGTCATCAATCTCGACCAACCC
ACCAAATTCTACAAAACCATGCAGTCCCCTCTCAAGTGGCAGACGCGGGT
AGTCAGCTGCTTTTCGACTGCCACCGGGTTCGCCGTCGGCAGTGTCGAGG
GCCGCTGTGCGATCCAGTATGTCGAGGACAAGGACTCCTCCAACAACTTC
AGTTTCAAGTGCCACCGTGAGACTCCTCAGCGCGATGTCAACAACATCTA
CTCCGTCAACGCCATCTCCTTCCACCCTGTCCACGGCACCTTCAGCACCG
CCGGCAGTGACGGCACCTTCCACTTCTGGGACAAGGACGCCAAGCATCGT
CTAAAGGGATATCCCTCTGTGGGCGGTACCATCTCCAGCACTGCCTTCAA
CCGCAACGGCAACATCTTCGCCTACGCTGTCAGTTACGACTGGAGCAAGG
GGTACTCCGCCAACACCCAGCAACTGCCCAACAAGGTTATGCTGCACCCT
GTCAGCCAAGAGGAAGTGAAGCCTAGACCAAACAACCGGAAGAGGTAA
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Coding sequence (CDS) from alignment at MCQH01000029:307175..308322+

>ATCC10864_001761-T1 ID=ATCC10864_001761-T1|Name=ATCC10864_001761-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2160bp|location=Sequence derived from alignment at MCQH01000029:307175..308322+ (Aspergillus niger ATCC 10864)
ATGTCGCTTTTCGGTTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGAC
CAACACCACAGGTGATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCG
AGGACAGTATTTCGGACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCT
GTAGCCTCATGGGACAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGG
CCAGAGCGAAGGTAAAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCT
GTTGCTGGTCGCCGGATGGTACGAAAGTGGTCGGAGCTGGCGCCGACAAA
GCCGCTCGGATGCTCGACCTTGCAACCAATGCGACCACTCAAGTCGCCGC
TCACGATGCGCCCATCAAATGCTGCCACATGATCCCAAACCCGGCTGGAG
GGAGCCCGCTACTCGTGACCGGTTCTTGGGACAAGACCATCAAGTATTGG
GACTTGCGACAGTCAAACCCCATCGCCTCGGTGGAGTGCCAGGAGCGTGT
TTACACCATGGATGTCAAGGACAAACTCCTCGTGGTCGGCACCGCAGACC
GCTATATCAACGTCATCAATCTCGACCAACCCACCAAATTCTACAAAACC
ATGCAGTCCCCTCTCAAGTGGCAGACGCGGGTAGTCAGCTGCTTTTCGAC
TGCCACCGGGTTCGCCGTCGGCAGTGTCGAGGGCCGCTGTGCGATCCAGT
ATGTCGAGGACAAGGACTCCTCCAACAACTTCAGTTTCAAGTGCCACCGT
GAGACTCCTCAGCGCGATGTCAACAACATCTACTCCGTCAACGCCATCTC
CTTCCACCCTGTCCACGGCACCTTCAGCACCGCCGGCAGTGACGGCACCT
TCCACTTCTGGGACAAGGACGCCAAGCATCGTCTAAAGGGATATCCCTCT
GTGGGCGGTACCATCTCCAGCACTGCCTTCAACCGCAACGGCAACATCTT
CGCCTACGCTGTCAGTTACGACTGGAGCAAGGGGTACTCCGCCAACACCC
AGCAACTGCCCAACAAGGTTATGCTGCACCCTGTCAGCCAAGAGGAAGTG
AAGCCTAGACCAAACAACCGGAAGAGGTAAATGTCGCTTTTCGGTTCCGT
CGGCGCCGCGACGACCTCAGCTGGTCAGACCAACACCACAGGTGATATCT
CCAAGGATGTCGCCCTGAACCAACCTCCCGAGGACAGTATTTCGGACCTC
CGCTTCTCCCCGGCTAGTGAACACCTCGCTGTAGCCTCATGGGACAAGAA
GGTTCGCATTTACGAGATCAATGAGCAGGGCCAGAGCGAAGGTAAAGCTC
TGTTCGAGCACGAGGCCCCCGTTCTGAGCTGTTGCTGGTCGCCGGATGGT
ACGAAAGTGGTCGGAGCTGGCGCCGACAAAGCCGCTCGGATGCTCGACCT
TGCAACCAATGCGACCACTCAAGTCGCCGCTCACGATGCGCCCATCAAAT
GCTGCCACATGATCCCAAACCCGGCTGGAGGGAGCCCGCTACTCGTGACC
GGTTCTTGGGACAAGACCATCAAGTATTGGGACTTGCGACAGTCAAACCC
CATCGCCTCGGTGGAGTGCCAGGAGCGTGTTTACACCATGGATGTCAAGG
ACAAACTCCTCGTGGTCGGCACCGCAGACCGCTATATCAACGTCATCAAT
CTCGACCAACCCACCAAATTCTACAAAACCATGCAGTCCCCTCTCAAGTG
GCAGACGCGGGTAGTCAGCTGCTTTTCGACTGCCACCGGGTTCGCCGTCG
GCAGTGTCGAGGGCCGCTGTGCGATCCAGTATGTCGAGGACAAGGACTCC
TCCAACAACTTCAGTTTCAAGTGCCACCGTGAGACTCCTCAGCGCGATGT
CAACAACATCTACTCCGTCAACGCCATCTCCTTCCACCCTGTCCACGGCA
CCTTCAGCACCGCCGGCAGTGACGGCACCTTCCACTTCTGGGACAAGGAC
GCCAAGCATCGTCTAAAGGGATATCCCTCTGTGGGCGGTACCATCTCCAG
CACTGCCTTCAACCGCAACGGCAACATCTTCGCCTACGCTGTCAGTTACG
ACTGGAGCAAGGGGTACTCCGCCAACACCCAGCAACTGCCCAACAAGGTT
ATGCTGCACCCTGTCAGCCAAGAGGAAGTGAAGCCTAGACCAAACAACCG
GAAGAGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006406mRNA export from nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GLE2ATCC10864_001761Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001761-T1.exon1ATCC10864_001761-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001761-T1.exon2ATCC10864_001761-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001761-T1.cdsATCC10864_001761-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001761-T1ATCC10864_001761-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR001680
InterProIPR037631
InterProIPR036322
InterProIPR020472
PFAMPF00400
Properties
Property NameValue
ProductRNA export factor gle2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:307175..308322 +
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