You are here

Home

ATCC10864_001808-T1, ATCC10864_001808-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001808-T1
Unique NameATCC10864_001808-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000032:30613..31649+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001808-T1 ID=ATCC10864_001808-T1|Name=ATCC10864_001808-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1037bp|location=Sequence derived from alignment at MCQH01000032:30613..31649+ (Aspergillus niger ATCC 10864)
ATGGACAAAGATACATTGGTGAGACCCGTGCCCGGCGGAATAAATCCCCC
CATACTGATTAGCCTCAGAACAAGCGCAGCCGCGTGTCCAGGGCACTTTT
ATCCAGTTCCGAACCATCCGCAATGACCTCTAGGACTACAATCAACAGAG
CCATGCTGATGGTGCCCGGCGGCTCCTCAACCCACAGTACGATGTCGTCA
GAGGTGCAGCCATATCTTTTTCCCGCTATAGCCTTTCAACAGGCCCCCCT
GTCAGATGCCCGCAGCATGTCTGGGTCAGTTCCCTACGCCTTCGACCAAG
CACAGCCCCTCCATCAAAGGAAACCAGACGTTGGAACCCACTACTTTCAG
GACCAAGAGTCCTATACACCCTTATTCTCAAATCAGACCATACCACCACA
GTCATTCAGACCCGATATTGAATCCTTTCCCCCAGCCATACCAACCACAG
ACGGTGCATACTTCCCTATCGATCAAGAAGAATGGCTCGCGATAGCAGTA
TCACAGTCACCTCTCAACCCTACAAATACAGACTATTACCTCCCAGAGTC
AGCTCCATCCTCCTTCTCTCAGTCACGGCTAACCCCCGTAACCACCGCAT
CTTTATCTTCCGCCACCACCGCAGACCTTGACTTCGAGCTTGATCTCGAC
CTCGATCTAGACGATCTCCAACTCCAATCCCTATCCGACACCTCCTCCGC
CCGCAGCCAGACGCGAGATCTAACCAACTACGGCATTAAAAATCCCGACG
GAACCTGGCGCTGCGCATATCCCGGCTGCTCATCACACGCCGTCTTCCGT
CGGGGCTGTGATCTCCGGAAACACTATAATCGTCACCGCAAACATCTCTT
TTGCCGGTACGAAGGGTGTCCGCAGGCTGTGCGGGGCGGGTTCTCCAGCA
AGAAAGACAGAGATCGACATGAGGCAAAACACAACCCAGAAATACCTTGT
GAGTGGGACGGGTGTCAGCGGGTATTTAGTAGGGTAGACAACATGAAGGA
TCATGTGAGGAGGATTCATAAGAGGAGGGAGACTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000032:30613..31649+

>ATCC10864_001808-T1 ID=ATCC10864_001808-T1|Name=ATCC10864_001808-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1974bp|location=Sequence derived from alignment at MCQH01000032:30613..31649+ (Aspergillus niger ATCC 10864)
ATGGACAAAGATACATTGAACAAGCGCAGCCGCGTGTCCAGGGCACTTTT
ATCCAGTTCCGAACCATCCGCAATGACCTCTAGGACTACAATCAACAGAG
CCATGCTGATGGTGCCCGGCGGCTCCTCAACCCACAGTACGATGTCGTCA
GAGGTGCAGCCATATCTTTTTCCCGCTATAGCCTTTCAACAGGCCCCCCT
GTCAGATGCCCGCAGCATGTCTGGGTCAGTTCCCTACGCCTTCGACCAAG
CACAGCCCCTCCATCAAAGGAAACCAGACGTTGGAACCCACTACTTTCAG
GACCAAGAGTCCTATACACCCTTATTCTCAAATCAGACCATACCACCACA
GTCATTCAGACCCGATATTGAATCCTTTCCCCCAGCCATACCAACCACAG
ACGGTGCATACTTCCCTATCGATCAAGAAGAATGGCTCGCGATAGCAGTA
TCACAGTCACCTCTCAACCCTACAAATACAGACTATTACCTCCCAGAGTC
AGCTCCATCCTCCTTCTCTCAGTCACGGCTAACCCCCGTAACCACCGCAT
CTTTATCTTCCGCCACCACCGCAGACCTTGACTTCGAGCTTGATCTCGAC
CTCGATCTAGACGATCTCCAACTCCAATCCCTATCCGACACCTCCTCCGC
CCGCAGCCAGACGCGAGATCTAACCAACTACGGCATTAAAAATCCCGACG
GAACCTGGCGCTGCGCATATCCCGGCTGCTCATCACACGCCGTCTTCCGT
CGGGGCTGTGATCTCCGGAAACACTATAATCGTCACCGCAAACATCTCTT
TTGCCGGTACGAAGGGTGTCCGCAGGCTGTGCGGGGCGGGTTCTCCAGCA
AGAAAGACAGAGATCGACATGAGGCAAAACACAACCCAGAAATACCTTGT
GAGTGGGACGGGTGTCAGCGGGTATTTAGTAGGGTAGACAACATGAAGGA
TCATGTGAGGAGGATTCATAAGAGGAGGGAGACTTGAATGGACAAAGATA
CATTGAACAAGCGCAGCCGCGTGTCCAGGGCACTTTTATCCAGTTCCGAA
CCATCCGCAATGACCTCTAGGACTACAATCAACAGAGCCATGCTGATGGT
GCCCGGCGGCTCCTCAACCCACAGTACGATGTCGTCAGAGGTGCAGCCAT
ATCTTTTTCCCGCTATAGCCTTTCAACAGGCCCCCCTGTCAGATGCCCGC
AGCATGTCTGGGTCAGTTCCCTACGCCTTCGACCAAGCACAGCCCCTCCA
TCAAAGGAAACCAGACGTTGGAACCCACTACTTTCAGGACCAAGAGTCCT
ATACACCCTTATTCTCAAATCAGACCATACCACCACAGTCATTCAGACCC
GATATTGAATCCTTTCCCCCAGCCATACCAACCACAGACGGTGCATACTT
CCCTATCGATCAAGAAGAATGGCTCGCGATAGCAGTATCACAGTCACCTC
TCAACCCTACAAATACAGACTATTACCTCCCAGAGTCAGCTCCATCCTCC
TTCTCTCAGTCACGGCTAACCCCCGTAACCACCGCATCTTTATCTTCCGC
CACCACCGCAGACCTTGACTTCGAGCTTGATCTCGACCTCGATCTAGACG
ATCTCCAACTCCAATCCCTATCCGACACCTCCTCCGCCCGCAGCCAGACG
CGAGATCTAACCAACTACGGCATTAAAAATCCCGACGGAACCTGGCGCTG
CGCATATCCCGGCTGCTCATCACACGCCGTCTTCCGTCGGGGCTGTGATC
TCCGGAAACACTATAATCGTCACCGCAAACATCTCTTTTGCCGGTACGAA
GGGTGTCCGCAGGCTGTGCGGGGCGGGTTCTCCAGCAAGAAAGACAGAGA
TCGACATGAGGCAAAACACAACCCAGAAATACCTTGTGAGTGGGACGGGT
GTCAGCGGGTATTTAGTAGGGTAGACAACATGAAGGATCATGTGAGGAGG
ATTCATAAGAGGAGGGAGACTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001808ATCC10864_001808Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001808-T1.exon1ATCC10864_001808-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001808-T1.exon2ATCC10864_001808-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001808-T1.cdsATCC10864_001808-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001808-T1ATCC10864_001808-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036236
InterProIPR013087
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000032supercontigMCQH01000032:30613..31649 +
Powered by Drupal