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ATCC10864_001829-T1, ATCC10864_001829-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001829-T1
Unique NameATCC10864_001829-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000032:104646..105871+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001829-T1 ID=ATCC10864_001829-T1|Name=ATCC10864_001829-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1226bp|location=Sequence derived from alignment at MCQH01000032:104646..105871+ (Aspergillus niger ATCC 10864)
ATGGCGGACGCTCAATTCGATAGTGCGCTGTAAGTGCTATGGTTCTGTTT
TTGTTTCAAGACTATGAAGCCTGCATAGCCTCTGGGTGCAATCATTCCAC
GCGGTCAACCCCGCTTGTTGCCTCCCGCTGACTATCATACCTGCTTCCAG
GGACCTGCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGG
CAATTACCTCCATCGTCCCTGACCTGACCGAAGACCTGCTCTCCTCTGTC
GACCAGCCTCTAGAAATCCGCAAATGCCCCAAGACAGACCGCGACTACCT
CCTCTGTGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCA
ATGAATTCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAGAGAGTG
AGAAAGCTTGAGGTCGCCGCTAACGAGGCTTTCGATGTCTACCGGGAGCT
GTACTACGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATG
GATTCGCTGGCGTTATCCTGTTGAAGAAGGGTGAGCGAGTGATGTCTTGA
TACTTTCAGGCTGGAAATACGTGCTGATATCTCGCCATTATAGGAGTTAC
GCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAGTATCCACGTCTTCGAGG
CTACCGACAGAGCGCGCATGTCCCACTACAAGCTGACTAGCACCGTCATC
CTGCACTTGGCTAATGAAACTGAGGCTTTGGGTGAGATGGACCTGAGTGG
TAACATGACCCGCCAGGTGGAGGTGGATCTTCCCGTCGAGTCGGATGCGA
GCCACGTCGCCAATGTTGGTCGACTTGTTGAGGACATGGAGTTGAAGATG
AGGAACTTGCTGCGTATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTATTGTGGC
GCGAGAGTTGTTACATTTCTGGGCTGGTTGCTAATTGAAATGTCCTTACA
GAGGAGGTATACTTCGGCAAGGCTAAGGATGTCGTGGGTGAACTTCGGAG
TAAGTGCAGTCTAACCAGCTGGTGGGCAATGCCAGACTAACAAGCGAAAC
AGGTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTGG
AGATGATCCGGTCTATGCACAGCTAG
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Coding sequence (CDS) from alignment at MCQH01000032:104646..105871+

>ATCC10864_001829-T1 ID=ATCC10864_001829-T1|Name=ATCC10864_001829-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4005bp|location=Sequence derived from alignment at MCQH01000032:104646..105871+ (Aspergillus niger ATCC 10864)
ATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCTCAA
CCCCCGCGACACGAAGCAAAACCTCCAGGCAATTACCTCCATCGTCCCTG
ACCTGACCGAAGACCTGCTCTCCTCTGTCGACCAGCCTCTAGAAATCCGC
AAATGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCGCGA
CGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGTTGG
AAGACGGAACTGTTCCCAGTGAGAGAGTGAGAAAGCTTGAGGTCGCCGCT
AACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGTAGG
CAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCCTGT
TGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAGT
ATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAAGCT
GACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGGGTG
AGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCTTCCC
GTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGAGGA
CATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGCAAGG
CTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGAGTCG
AACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACAGCTA
GATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCTCA
ACCCCCGCGACACGAAGCAAAACCTCCAGGCAATTACCTCCATCGTCCCT
GACCTGACCGAAGACCTGCTCTCCTCTGTCGACCAGCCTCTAGAAATCCG
CAAATGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCGCG
ACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGTTG
GAAGACGGAACTGTTCCCAGTGAGAGAGTGAGAAAGCTTGAGGTCGCCGC
TAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGTAG
GCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCCTG
TTGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAG
TATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAAGC
TGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGGGT
GAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCTTCC
CGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGAGG
ACATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGCAAG
GCTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGAGTC
GAACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACAGCT
AGATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCTC
AACCCCCGCGACACGAAGCAAAACCTCCAGGCAATTACCTCCATCGTCCC
TGACCTGACCGAAGACCTGCTCTCCTCTGTCGACCAGCCTCTAGAAATCC
GCAAATGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCGC
GACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGTT
GGAAGACGGAACTGTTCCCAGTGAGAGAGTGAGAAAGCTTGAGGTCGCCG
CTAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGTA
GGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCCT
GTTGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGACA
GTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAAG
CTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGGG
TGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCTTC
CCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGAG
GACATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGCAA
GGCTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGAGT
CGAACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACAGC
TAGATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCT
CAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATTACCTCCATCGTCC
CTGACCTGACCGAAGACCTGCTCTCCTCTGTCGACCAGCCTCTAGAAATC
CGCAAATGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCG
CGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGT
TGGAAGACGGAACTGTTCCCAGTGAGAGAGTGAGAAAGCTTGAGGTCGCC
GCTAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGT
AGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCC
TGTTGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGAC
AGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAA
GCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGG
GTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCTT
CCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGA
GGACATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGCA
AGGCTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGAG
TCGAACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACAG
CTAGATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCC
TCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATTACCTCCATCGTC
CCTGACCTGACCGAAGACCTGCTCTCCTCTGTCGACCAGCCTCTAGAAAT
CCGCAAATGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACC
GCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCG
TTGGAAGACGGAACTGTTCCCAGTGAGAGAGTGAGAAAGCTTGAGGTCGC
CGCTAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAG
TAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATC
CTGTTGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGA
CAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACA
AGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTG
GGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCT
TCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTG
AGGACATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGC
AAGGCTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGA
GTCGAACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACA
GCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: Biological Process
TermDefinition
GO:0051016barbed-end actin filament capping
GO:0030036actin cytoskeleton organization
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0008290F-actin capping protein complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAP2ATCC10864_001829Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001829-T1ATCC10864_001829-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001829-T1.exon1ATCC10864_001829-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001829-T1.exon2ATCC10864_001829-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001829-T1.exon3ATCC10864_001829-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001829-T1.exon4ATCC10864_001829-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001829-T1.exon5ATCC10864_001829-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001829-T1.cdsATCC10864_001829-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR043175
InterProIPR042276
InterProIPR037282
InterProIPR019771
InterProIPR001698
PFAMPF01115
Properties
Property NameValue
ProductF-actin-capping protein subunit beta
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000032supercontigMCQH01000032:104646..105871 +
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