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ATCC10864_001872-T1, ATCC10864_001872-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001872-T1
Unique NameATCC10864_001872-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000036:47602..48837+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001872-T1 ID=ATCC10864_001872-T1|Name=ATCC10864_001872-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1236bp|location=Sequence derived from alignment at MCQH01000036:47602..48837+ (Aspergillus niger ATCC 10864)
ATGCGTCAAGCTCAGTCTGCTTCTCTCCTTGCGGCCCTTCTGTCGGCCAC
CCAGGTCGCTGCCCACGGTCACGTCACCAACATCGTCGTCGACGGTGTCT
ACTACGAGGGCTTCGACATCAACTCCTTCCCCTACGAGTCCGACCCCCCG
AAGGTCGCCGCCTGGACCACCCCCAACACCGGTAACGGCTTCATCTCGCC
CGATGAGTACCGCAACCCCAACATCATCTGCCACGAGAACGCCACCAACG
CCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCAGTGG
ACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGGCTCG
CTGTGACGGCAGCTGCGAGACCGTCGACAAGACCGACCTGGAGTTCTTCA
AGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTACCTGG
GGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGATCCC
TCCCTCCATCGCCGCCGGTAACTACGTCCTCCGTCACGAGCTCATCGCTC
TCCACGGCGCCGAGGAGGAGGACGGCGCCCAGAACTACCCCCAGTGCTTC
AACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTTAAGGG
TACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATCTACT
CCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGGCGAT
GTCTCCATCACTCAGACTACCTCCGCTGTCACTTCCACCGGCACCGCCGT
GGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCCGCCG
CTACCAGCGCTGCTGCCGTGACCAGCGTTGACACCAACACCCAGATCGCT
CAGTCCAGCAGTGCCCTTGCCCCTGCCGCCCCTAGCTCCAGCTCCTCCGC
CTACACTCAGATCCCCGTGCAGGTCCCCTCTTCTTGGACTACCCTGTTGA
CCTTCACCAACACTCCCCAAGCTGTGCAGCCTACTACCTCGGTCCAGCCC
GAGCCTGCTCAGTCGACTATCACCCCTGCTCCGGCTGTTAGCTCTGCTGC
CTCCGGTAGCTCCGGTAGCCAGTCTCTGTACGGCCAGTGCGGTGGTATCA
ACTGGACTGGTGCTACTCAGTGCGCGAGCGGATCTAGCTGCCACTCGTAC
AACCCTTACTACTACCAGTGCATTGCTAGTGCTTAA
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Coding sequence (CDS) from alignment at MCQH01000036:47602..48837+

>ATCC10864_001872-T1 ID=ATCC10864_001872-T1|Name=ATCC10864_001872-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1236bp|location=Sequence derived from alignment at MCQH01000036:47602..48837+ (Aspergillus niger ATCC 10864)
ATGCGTCAAGCTCAGTCTGCTTCTCTCCTTGCGGCCCTTCTGTCGGCCAC
CCAGGTCGCTGCCCACGGTCACGTCACCAACATCGTCGTCGACGGTGTCT
ACTACGAGGGCTTCGACATCAACTCCTTCCCCTACGAGTCCGACCCCCCG
AAGGTCGCCGCCTGGACCACCCCCAACACCGGTAACGGCTTCATCTCGCC
CGATGAGTACCGCAACCCCAACATCATCTGCCACGAGAACGCCACCAACG
CCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCAGTGG
ACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGGCTCG
CTGTGACGGCAGCTGCGAGACCGTCGACAAGACCGACCTGGAGTTCTTCA
AGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTACCTGG
GGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGATCCC
TCCCTCCATCGCCGCCGGTAACTACGTCCTCCGTCACGAGCTCATCGCTC
TCCACGGCGCCGAGGAGGAGGACGGCGCCCAGAACTACCCCCAGTGCTTC
AACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTTAAGGG
TACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATCTACT
CCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGGCGAT
GTCTCCATCACTCAGACTACCTCCGCTGTCACTTCCACCGGCACCGCCGT
GGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCCGCCG
CTACCAGCGCTGCTGCCGTGACCAGCGTTGACACCAACACCCAGATCGCT
CAGTCCAGCAGTGCCCTTGCCCCTGCCGCCCCTAGCTCCAGCTCCTCCGC
CTACACTCAGATCCCCGTGCAGGTCCCCTCTTCTTGGACTACCCTGTTGA
CCTTCACCAACACTCCCCAAGCTGTGCAGCCTACTACCTCGGTCCAGCCC
GAGCCTGCTCAGTCGACTATCACCCCTGCTCCGGCTGTTAGCTCTGCTGC
CTCCGGTAGCTCCGGTAGCCAGTCTCTGTACGGCCAGTGCGGTGGTATCA
ACTGGACTGGTGCTACTCAGTGCGCGAGCGGATCTAGCTGCCACTCGTAC
AACCCTTACTACTACCAGTGCATTGCTAGTGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001872ATCC10864_001872Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001872-T1.exon1ATCC10864_001872-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001872-T1.cdsATCC10864_001872-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001872-T1ATCC10864_001872-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000254
InterProIPR005103
PFAMPF03443
PFAMPF00734
InterProIPR035971
Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:AA9
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000036supercontigMCQH01000036:47602..48837 +
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