You are here

Home

ATCC10864_001889-T1, ATCC10864_001889-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001889-T1
Unique NameATCC10864_001889-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000036:97910..99043+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001889-T1 ID=ATCC10864_001889-T1|Name=ATCC10864_001889-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1134bp|location=Sequence derived from alignment at MCQH01000036:97910..99043+ (Aspergillus niger ATCC 10864)
ATGGGGCCGCAACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGC
TCCCATGTATAGGTCGTCGAATAACCAGCTCCCTATGTTGCACCTCGCCG
ACACGACGCGGAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACC
TTTCTGTTCCTCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACTCC
CAAGCCAGCGCCCGGGTCTCCTCCAAACACCTCAAACCTGCTATACTCGT
CGCTATGCTTTGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGA
GTGACTGGAGGTTTATTTAACCCCGCGGTATGCCCTGCCATTCCCATGTC
GGAATTTGCAATTGATCGTGATGCTAGGTCACTCTGGCCCTGTGTCTGGT
TGGCGGATTATCTCCCATCCGTGGGGTTATTCTTTTCGGAGTTCAGCTCA
TCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGAC
TTGAATGTTGGCACTCGCTTGGGCGGTGGTGCCTCAATATCACAGGGATT
GTTCATCGAGGTTTTCTTGACGGCTCAGTTAGTGTTTATTATCATCATGC
TGGCTGTTGTGAAACATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGC
CTGGTATTCTTCGTGACTGAGATGGTTGGTAAGTAGATGTCTTCCGCCCG
ATTTCTGCGAGATATTGTGCGACTAACCTCATCCTCTTCCAGGGGACTAC
TATACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGTCCTGACGTCAT
CAACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGGTCCGTTGC
TGGGAAGTCTCCTCGCATGTGGCTTCTTCACCTTCCTCAAGATGTTCCAG
TACACCACCGTCAACCCCGGTCAGGATTACAATGAATGGGAAGCCAAGAT
GGGCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCGTCCTTCAT
ATAACTCCGAAGCCACTACGGTCGAGCAGCCGCAATCCCCATCAGCCGGC
AGGAGGAACCACACCCCGACCAACTCTCAGCCGCAGAATAACCCTAATAT
TCCTAATATCCCTCACGGGGCAGAGCAGGTGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000036:97910..99043+

>ATCC10864_001889-T1 ID=ATCC10864_001889-T1|Name=ATCC10864_001889-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3060bp|location=Sequence derived from alignment at MCQH01000036:97910..99043+ (Aspergillus niger ATCC 10864)
ATGGGGCCGCAACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGC
TCCCATGTATAGGTCGTCGAATAACCAGCTCCCTATGTTGCACCTCGCCG
ACACGACGCGGAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACC
TTTCTGTTCCTCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACTCC
CAAGCCAGCGCCCGGGTCTCCTCCAAACACCTCAAACCTGCTATACTCGT
CGCTATGCTTTGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGA
GTGACTGGAGGTTTATTTAACCCCGCGGTCACTCTGGCCCTGTGTCTGGT
TGGCGGATTATCTCCCATCCGTGGGGTTATTCTTTTCGGAGTTCAGCTCA
TCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGAC
TTGAATGTTGGCACTCGCTTGGGCGGTGGTGCCTCAATATCACAGGGATT
GTTCATCGAGGTTTTCTTGACGGCTCAGTTAGTGTTTATTATCATCATGC
TGGCTGTTGTGAAACATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGC
CTGGTATTCTTCGTGACTGAGATGGTTGGGGACTACTATACTGGCGGCTC
ACTCAACCCGGCGCGATCACTCGGTCCTGACGTCATCAACCGCAGTTTCC
CCGGGTACCACTGGATCTACTGGGTCGGTCCGTTGCTGGGAAGTCTCCTC
GCATGTGGCTTCTTCACCTTCCTCAAGATGTTCCAGTACACCACCGTCAA
CCCCGGTCAGGATTACAATGAATGGGAAGCCAAGATGGGCTCGGGAGGTC
CCGGATCGTGGGACATGTCGATGCACCGTCCTTCATATAACTCCGAAGCC
ACTACGGTCGAGCAGCCGCAATCCCCATCAGCCGGCAGGAGGAACCACAC
CCCGACCAACTCTCAGCCGCAGAATAACCCTAATATTCCTAATATCCCTC
ACGGGGCAGAGCAGGTGTAGATGGGGCCGCAACAATGGTTTCGCAAGCGC
AATCCCGACAGCCAGACGGCTCCCATGTATAGGTCGTCGAATAACCAGCT
CCCTATGTTGCACCTCGCCGACACGACGCGGAACAATTTCATCGCTGCCG
TAGGGGAATTTGTGGGAACCTTTCTGTTCCTCTTCTTCTCCTTCGCCGGG
ACGCAGGTGTCTAATACTCCCAAGCCAGCGCCCGGGTCTCCTCCAAACAC
CTCAAACCTGCTATACTCGTCGCTATGCTTTGGGTTCTCGTTGATGGTCA
ATGTGTGGGCATTCTATCGAGTGACTGGAGGTTTATTTAACCCCGCGGTC
ACTCTGGCCCTGTGTCTGGTTGGCGGATTATCTCCCATCCGTGGGGTTAT
TCTTTTCGGAGTTCAGCTCATCGCAGGCATTGCCTCTGCCGGTGTCGTGG
GTGCTTTGTTCCCAGGCGACTTGAATGTTGGCACTCGCTTGGGCGGTGGT
GCCTCAATATCACAGGGATTGTTCATCGAGGTTTTCTTGACGGCTCAGTT
AGTGTTTATTATCATCATGCTGGCTGTTGTGAAACATAAATCCACCTTCC
TGGCGCCTGTAGGCATTGGCCTGGTATTCTTCGTGACTGAGATGGTTGGG
GACTACTATACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGTCCTGA
CGTCATCAACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGGTC
CGTTGCTGGGAAGTCTCCTCGCATGTGGCTTCTTCACCTTCCTCAAGATG
TTCCAGTACACCACCGTCAACCCCGGTCAGGATTACAATGAATGGGAAGC
CAAGATGGGCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCGTC
CTTCATATAACTCCGAAGCCACTACGGTCGAGCAGCCGCAATCCCCATCA
GCCGGCAGGAGGAACCACACCCCGACCAACTCTCAGCCGCAGAATAACCC
TAATATTCCTAATATCCCTCACGGGGCAGAGCAGGTGTAGATGGGGCCGC
AACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGCTCCCATGTAT
AGGTCGTCGAATAACCAGCTCCCTATGTTGCACCTCGCCGACACGACGCG
GAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACCTTTCTGTTCC
TCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACTCCCAAGCCAGCG
CCCGGGTCTCCTCCAAACACCTCAAACCTGCTATACTCGTCGCTATGCTT
TGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGAGTGACTGGAG
GTTTATTTAACCCCGCGGTCACTCTGGCCCTGTGTCTGGTTGGCGGATTA
TCTCCCATCCGTGGGGTTATTCTTTTCGGAGTTCAGCTCATCGCAGGCAT
TGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGACTTGAATGTTG
GCACTCGCTTGGGCGGTGGTGCCTCAATATCACAGGGATTGTTCATCGAG
GTTTTCTTGACGGCTCAGTTAGTGTTTATTATCATCATGCTGGCTGTTGT
GAAACATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGCCTGGTATTCT
TCGTGACTGAGATGGTTGGGGACTACTATACTGGCGGCTCACTCAACCCG
GCGCGATCACTCGGTCCTGACGTCATCAACCGCAGTTTCCCCGGGTACCA
CTGGATCTACTGGGTCGGTCCGTTGCTGGGAAGTCTCCTCGCATGTGGCT
TCTTCACCTTCCTCAAGATGTTCCAGTACACCACCGTCAACCCCGGTCAG
GATTACAATGAATGGGAAGCCAAGATGGGCTCGGGAGGTCCCGGATCGTG
GGACATGTCGATGCACCGTCCTTCATATAACTCCGAAGCCACTACGGTCG
AGCAGCCGCAATCCCCATCAGCCGGCAGGAGGAACCACACCCCGACCAAC
TCTCAGCCGCAGAATAACCCTAATATTCCTAATATCCCTCACGGGGCAGA
GCAGGTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001889ATCC10864_001889Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001889-T1.exon1ATCC10864_001889-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001889-T1.exon2ATCC10864_001889-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001889-T1.exon3ATCC10864_001889-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001889-T1.cdsATCC10864_001889-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001889-T1ATCC10864_001889-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR034294
PFAMPF00230
InterProIPR000425
InterProIPR023271
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000036supercontigMCQH01000036:97910..99043 +
Powered by Drupal