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ATCC10864_001892-T1, ATCC10864_001892-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001892-T1
Unique NameATCC10864_001892-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000036:106283..107968-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001892-T1 ID=ATCC10864_001892-T1|Name=ATCC10864_001892-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1686bp|location=Sequence derived from alignment at MCQH01000036:106283..107968- (Aspergillus niger ATCC 10864)
ATGGGTGTTCAGGAAACAGCGCCGAAGAAAAGAACTCGGGTCAGTCACAC
CAAGGTGCGTACGGGTTGTCGGACCTGTAGGTACGGAGTCACCGTGGATC
TTGGATTGTTTGCTTGTGCGTGGGGACACCATCGTTAATGTGGATCATGT
AGGATACGCCATAAGAAATGTGACGAGACCCGACCTATCTGTCGCATGTG
CAGCAGCACTGGACGGATTTGCGATGGATACCAGCAAACAATCGATAGGA
GAACGCGCGCGTTTAGACTCCGGCTCGCTTCAACATCGCCATCATCGACG
AGCAGCTCATCTTCAACGGTGAGTGTGCCGTCTCTAGTGTCGGATCTGAT
CTTACACCCCAATGAGATCGACCTCACCCGGCAGGAGCGTTGGTATCTCG
ACTTCTTCCGCAGGAATACTTCTTTTCAATGTTCTGGTTACTTTGACGAT
GATTTCTGGCTGCGTCTGGTACACCAAGTCACCGAGGCCGAGCCAGCGGT
CAGACACGCTGCCATTGCCCTAAGTGCGCTCCACTGTAACTTTGAGCGAA
CCAGCACCGGACAGGGGGCCATAGACAGCCGTCTGCCTCTCCAGCAATGT
GTCAAAGCAATTTCCTCACTGAGACATCAGCTAGCGGGTGGAGGAGTTCT
ATCCCGCTCTAACATGCAAATAACCCTCGTCACCTGCGTACTCTTCGTCT
CGTTCATGTTCCTGCAGGGTGATACGCACTCTGCCTATTGTCACTTGCGT
GGGGGTCTCAAACTCCTCAAAGAATGGAGGACCACAGACATGCCGGGCTA
TTCCACCACTGGTTCAGTGCTGATGAAAGTATTTGCCCATCTACAACTAC
AATGGTCGACGTTCGCCGACGAAGTCTTCATTGAAGAGGTAGATAGCAAT
CGCTTCGACGTTCCCTATATGGAGATCAATGATCTCAGCCTCGAAGAGCC
GACCGACAGCTTAGAAAAGGCAGGCAGCCTGTTAGTCAGTCTAGGCCGAC
TCGTCTTGACTCCACGTCCTTCCGGCACCTCCTCACCAGGCTACTGCACC
GTCCTCGACAGCAGACGCATGGCCATCCTTAACAAACTCCAGCATTGGAC
CATCGAACTCGACAACTCAATGACATGCGCCGGAAACACCCTCATCCTCC
GCGACAACACCATCCTCACTGTCCTCAAACTCTGGAGTGAGATCATCTAC
ATCATGGCCGCGACAGAAACGCGCCTTGGCGGCAGCGAAACCCGCTTCGA
TGCCTTTCATCTCAACTTCGGCCGAGCCGTGGCGCTCGCCAAAATCCTCC
TCCTCTCCACACCCGCCCAATCAACCATGCCTAATTTCTCCATCGGAATG
GGCATCATCCCCCCTCTTTTCTTCTGTGCCTTCAAATGTCGCGACTGGTA
CATCCGGCGAGAAGCATTACAATTACTACGCAGCTGCCAGAGACAAGAAG
GTCTCTGGACAACACCGGGGGCCGTGCTCGTCCTGGAACGGTTGATTGAT
ATTGAATCTAAAGGCCTCATGCCGGGAGACCTGGTTCCAGAGTCACGCCG
CGTTGACTCGATTCATGTGAATATCCTCCCGGATGATCATAAGATTGGGT
TATGGTATCGTCGATCGGGCATGGGCGTGGGTTATGTAGGTTCGGGGATG
TGGGAGAAGGCATTACTGGAATACCATGTTGGGTGA
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Coding sequence (CDS) from alignment at MCQH01000036:106283..107968-

>ATCC10864_001892-T1 ID=ATCC10864_001892-T1|Name=ATCC10864_001892-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3228bp|location=Sequence derived from alignment at MCQH01000036:106283..107968- (Aspergillus niger ATCC 10864)
GATACGCCATAAGAAATGTGACGAGACCCGACCTATCTGTCGCATGTGCA
GCAGCACTGGACGGATTTGCGATGGATACCAGCAAACAATCGATAGGAGA
ACGCGCGCGTTTAGACTCCGGCTCGCTTCAACATCGCCATCATCGACGAG
CAGCTCATCTTCAACGGTGAGTGTGCCGTCTCTAGTGTCGGATCTGATCT
TACACCCCAATGAGATCGACCTCACCCGGCAGGAGCGTTGGTATCTCGAC
TTCTTCCGCAGGAATACTTCTTTTCAATGTTCTGGTTACTTTGACGATGA
TTTCTGGCTGCGTCTGGTACACCAAGTCACCGAGGCCGAGCCAGCGGTCA
GACACGCTGCCATTGCCCTAAGTGCGCTCCACTGTAACTTTGAGCGAACC
AGCACCGGACAGGGGGCCATAGACAGCCGTCTGCCTCTCCAGCAATGTGT
CAAAGCAATTTCCTCACTGAGACATCAGCTAGCGGGTGGAGGAGTTCTAT
CCCGCTCTAACATGCAAATAACCCTCGTCACCTGCGTACTCTTCGTCTCG
TTCATGTTCCTGCAGGGTGATACGCACTCTGCCTATTGTCACTTGCGTGG
GGGTCTCAAACTCCTCAAAGAATGGAGGACCACAGACATGCCGGGCTATT
CCACCACTGGTTCAGTGCTGATGAAAGTATTTGCCCATCTACAACTACAA
TGGTCGACGTTCGCCGACGAAGTCTTCATTGAAGAGGTAGATAGCAATCG
CTTCGACGTTCCCTATATGGAGATCAATGATCTCAGCCTCGAAGAGCCGA
CCGACAGCTTAGAAAAGGCAGGCAGCCTGTTAGTCAGTCTAGGCCGACTC
GTCTTGACTCCACGTCCTTCCGGCACCTCCTCACCAGGCTACTGCACCGT
CCTCGACAGCAGACGCATGGCCATCCTTAACAAACTCCAGCATTGGACCA
TCGAACTCGACAACTCAATGACATGCGCCGGAAACACCCTCATCCTCCGC
GACAACACCATCCTCACTGTCCTCAAACTCTGGAGTGAGATCATCTACAT
CATGGCCGCGACAGAAACGCGCCTTGGCGGCAGCGAAACCCGCTTCGATG
CCTTTCATCTCAACTTCGGCCGAGCCGTGGCGCTCGCCAAAATCCTCCTC
CTCTCCACACCCGCCCAATCAACCATGCCTAATTTCTCCATCGGAATGGG
CATCATCCCCCCTCTTTTCTTCTGTGCCTTCAAATGTCGCGACTGGTACA
TCCGGCGAGAAGCATTACAATTACTACGCAGCTGCCAGAGACAAGAAGGT
CTCTGGACAACACCGGGGGCCGTGCTCGTCCTGGAACGGTTGATTGATAT
TGAATCTAAAGGCCTCATGCCGGGAGACCTGGTTCCAGAGTCACGCCGCG
TTGACTCGATTCATGTGAATATCCTCCCGGATGATCATAAGATTGGGTTA
TGGTATCGTCGATCGGGCATGGGCGTGGGTTATGTAGGTTCGGGGATGTG
GGAGAAGGCATTACTGGAATACCATGTTGGGTGAATGGGTGTTCAGGAAA
CAGCGCCGAAGAAAAGAACTCGGGTCAGTCACACCAAGGTGCGTACGGGT
TGTCGGACCTGTAGGATACGCCATAAGAAATGTGACGAGACCCGACCTAT
CTGTCGCATGTGCAGCAGCACTGGACGGATTTGCGATGGATACCAGCAAA
CAATCGATAGGAGAACGCGCGCGTTTAGACTCCGGCTCGCTTCAACATCG
CCATCATCGACGAGCAGCTCATCTTCAACGGTGAGTGTGCCGTCTCTAGT
GTCGGATCTGATCTTACACCCCAATGAGATCGACCTCACCCGGCAGGAGC
GTTGGTATCTCGACTTCTTCCGCAGGAATACTTCTTTTCAATGTTCTGGT
TACTTTGACGATGATTTCTGGCTGCGTCTGGTACACCAAGTCACCGAGGC
CGAGCCAGCGGTCAGACACGCTGCCATTGCCCTAAGTGCGCTCCACTGTA
ACTTTGAGCGAACCAGCACCGGACAGGGGGCCATAGACAGCCGTCTGCCT
CTCCAGCAATGTGTCAAAGCAATTTCCTCACTGAGACATCAGCTAGCGGG
TGGAGGAGTTCTATCCCGCTCTAACATGCAAATAACCCTCGTCACCTGCG
TACTCTTCGTCTCGTTCATGTTCCTGCAGGGTGATACGCACTCTGCCTAT
TGTCACTTGCGTGGGGGTCTCAAACTCCTCAAAGAATGGAGGACCACAGA
CATGCCGGGCTATTCCACCACTGGTTCAGTGCTGATGAAAGTATTTGCCC
ATCTACAACTACAATGGTCGACGTTCGCCGACGAAGTCTTCATTGAAGAG
GTAGATAGCAATCGCTTCGACGTTCCCTATATGGAGATCAATGATCTCAG
CCTCGAAGAGCCGACCGACAGCTTAGAAAAGGCAGGCAGCCTGTTAGTCA
GTCTAGGCCGACTCGTCTTGACTCCACGTCCTTCCGGCACCTCCTCACCA
GGCTACTGCACCGTCCTCGACAGCAGACGCATGGCCATCCTTAACAAACT
CCAGCATTGGACCATCGAACTCGACAACTCAATGACATGCGCCGGAAACA
CCCTCATCCTCCGCGACAACACCATCCTCACTGTCCTCAAACTCTGGAGT
GAGATCATCTACATCATGGCCGCGACAGAAACGCGCCTTGGCGGCAGCGA
AACCCGCTTCGATGCCTTTCATCTCAACTTCGGCCGAGCCGTGGCGCTCG
CCAAAATCCTCCTCCTCTCCACACCCGCCCAATCAACCATGCCTAATTTC
TCCATCGGAATGGGCATCATCCCCCCTCTTTTCTTCTGTGCCTTCAAATG
TCGCGACTGGTACATCCGGCGAGAAGCATTACAATTACTACGCAGCTGCC
AGAGACAAGAAGGTCTCTGGACAACACCGGGGGCCGTGCTCGTCCTGGAA
CGGTTGATTGATATTGAATCTAAAGGCCTCATGCCGGGAGACCTGGTTCC
AGAGTCACGCCGCGTTGACTCGATTCATGTGAATATCCTCCCGGATGATC
ATAAGATTGGGTTATGGTATCGTCGATCGGGCATGGGCGTGGGTTATGTA
GGTTCGGGGATGTGGGAGAAGGCATTACTGGAATACCATGTTGGGTGAAT
GGGTGTTCAGGAAACAGCGCCGAAGAAAAGAACTCGGGTCAGTCACACCA
AGGTGCGTACGGGTTGTCGGACCTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001892ATCC10864_001892Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001892-T1ATCC10864_001892-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001892-T1.cdsATCC10864_001892-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001892-T1.exon2ATCC10864_001892-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001892-T1.exon1ATCC10864_001892-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00172
PFAMPF11951
InterProIPR001138
InterProIPR036864
InterProIPR021858
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000036supercontigMCQH01000036:106283..107968 -
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