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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000036:116250..117267+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_001895-T1 ID=ATCC10864_001895-T1|Name=ATCC10864_001895-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1018bp|location=Sequence derived from alignment at MCQH01000036:116250..117267+ (Aspergillus niger ATCC 10864)
ATGCGATTGACCGTCGAACTGATCCAAAATTCCCTGTCCTACATCAACCC
GCTCAAAGACCGCGAGCTAGATCTTCGAGGTGCGTTCCAGCCACCAGTCC
TGAAAAGAACAGATACTACACTTTTGAGATGAGCTTGATTGATATCGGTT
TTGTGTTTGAGTCGTATAGGGCACAAGATACCCGCTATTGAGAACTTGGG
TATTGCCAAGGTAACCTCTTCCCACCACCTCATTTCTCTCTTGGAATGTC
TTCGCGGCATTATATATGGTATAGAAGCTAAGAAAGGAACGGTAGGACCA
AGATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTCC
CCTTCTTCCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAG
CAGATCCAGCCGACGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGT
GTTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAA
ATCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGG
AAGGAGGTAAGCTTCCCCTTTTCTTCTATTTCCTTTCCTAGCGAGATCAA
AGCAAAGCAAAGTCTAACATAAATGGTATTGGTGTAGCACTATCGCTACT
ACGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTG
AAGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCGGAGGA
GCCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTG
ATGTGCCCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAG
GCGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGAT
GATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGT
TGAATGAGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGATAGTGAT
GAGGAGATGCAGACATAG back to topCoding sequence (CDS) from alignment at MCQH01000036:116250..117267+ >ATCC10864_001895-T1 ID=ATCC10864_001895-T1|Name=ATCC10864_001895-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3048bp|location=Sequence derived from alignment at MCQH01000036:116250..117267+ (Aspergillus niger ATCC 10864)
ATGCGATTGACCGTCGAACTGATCCAAAATTCCCTGTCCTACATCAACCC
GCTCAAAGACCGCGAGCTAGATCTTCGAGGGCACAAGATACCCGCTATTG
AGAACTTGGGTATTGCCAAGGACCAAGATGCAATCGACCTAACAGACAAC
GATATCACCTCCCTCGGAAACTTCCCCTTCTTCCCTCGCCTCCGCACCCT
CCTCCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGACGATATCGACCT
CGGTGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAATAACATGAACGAG
TTGGCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGT
GTTGCTGGAGAATCCTGTTACCAGGAAGGAGCACTATCGCTACTACGTCA
TCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTGAAGGAC
GCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCGGAGGAGCCGTC
TGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTGATGTGC
CCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAGGCGGTG
CGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGATGATTCG
CGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGTTGAATG
AGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGATAGTGATGAGGAG
ATGCAGACATAGATGCGATTGACCGTCGAACTGATCCAAAATTCCCTGTC
CTACATCAACCCGCTCAAAGACCGCGAGCTAGATCTTCGAGGGCACAAGA
TACCCGCTATTGAGAACTTGGGTATTGCCAAGGACCAAGATGCAATCGAC
CTAACAGACAACGATATCACCTCCCTCGGAAACTTCCCCTTCTTCCCTCG
CCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGA
CGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAAT
AACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTT
GACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGAAGGAGCACTATC
GCTACTACGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAG
AAAGTGAAGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGC
GGAGGAGCCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCA
CGTTTGATGTGCCCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCG
GATAAGGCGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGA
GAAGATGATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGA
AGGAGTTGAATGAGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGAT
AGTGATGAGGAGATGCAGACATAGATGCGATTGACCGTCGAACTGATCCA
AAATTCCCTGTCCTACATCAACCCGCTCAAAGACCGCGAGCTAGATCTTC
GAGGGCACAAGATACCCGCTATTGAGAACTTGGGTATTGCCAAGGACCAA
GATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTCCC
CTTCTTCCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGC
AGATCCAGCCGACGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTG
TTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAA
TCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGA
AGGAGCACTATCGCTACTACGTCATCTGGCGCATCCCCAGCGTCCGCTTC
CTCGACTACCAGAAAGTGAAGGACGCGGAGCGCGAAAAAGCCACCGAGTT
GTTCGGCACAGCGGAGGAGCCGTCTGCGCTGGCGTCTAAGATCATGGGAA
TCAAGTCTCGCACGTTTGATGTGCCCTCGGGCGCAGGGGGTGCGGATCGT
GGTGCGCCCGCGGATAAGGCGGTGCGGGTGAAGTTGACGGAGAAGGAGAG
GAAGAGGGTGGAGAAGATGATTCGCGAGGCGAAGAGTTTGCAGGAGATTT
CGCGGTTGGAGAAGGAGTTGAATGAGGGGAGGATACCTGGAGGTGCATTG
GATTATGCTGATAGTGATGAGGAGATGCAGACATAGATGCGATTGACCGT
CGAACTGATCCAAAATTCCCTGTCCTACATCAACCCGCTCAAAGACCGCG
AGCTAGATCTTCGAGGGCACAAGATACCCGCTATTGAGAACTTGGGTATT
GCCAAGGACCAAGATGCAATCGACCTAACAGACAACGATATCACCTCCCT
CGGAAACTTCCCCTTCTTCCCTCGCCTCCGCACCCTCCTCCTCGCGCGTA
ACCGAGTCAAGCAGATCCAGCCGACGATATCGACCTCGGTGCCGAATCTG
AGCGCGCTGGTGTTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGA
CCCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATC
CTGTTACCAGGAAGGAGCACTATCGCTACTACGTCATCTGGCGCATCCCC
AGCGTCCGCTTCCTCGACTACCAGAAAGTGAAGGACGCGGAGCGCGAAAA
AGCCACCGAGTTGTTCGGCACAGCGGAGGAGCCGTCTGCGCTGGCGTCTA
AGATCATGGGAATCAAGTCTCGCACGTTTGATGTGCCCTCGGGCGCAGGG
GGTGCGGATCGTGGTGCGCCCGCGGATAAGGCGGTGCGGGTGAAGTTGAC
GGAGAAGGAGAGGAAGAGGGTGGAGAAGATGATTCGCGAGGCGAAGAGTT
TGCAGGAGATTTCGCGGTTGGAGAAGGAGTTGAATGAGGGGAGGATACCT
GGAGGTGCATTGGATTATGCTGATAGTGATGAGGAGATGCAGACATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000398 | mRNA splicing, via spliceosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030620 | U2 snRNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
Properties
| Property Name | Value |
|---|
| Product | U2 snRNP complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000036 | supercontig | MCQH01000036:116250..117267 + |
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