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ATCC10864_001929-T1, ATCC10864_001929-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001929-T1
Unique NameATCC10864_001929-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000043:13954..14943-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001929-T1 ID=ATCC10864_001929-T1|Name=ATCC10864_001929-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=990bp|location=Sequence derived from alignment at MCQH01000043:13954..14943- (Aspergillus niger ATCC 10864)
ATGGCGACCGAGTTGACCGTCCAGTCGGAACGTGCGTTCCAGAAGCAGCC
TCACATCTTCGTCAACCCCAAGGCTCAGGCGAAGAGCAAGAAGGTTGGCA
CCGGCCGCCGTTGGTACAAGGATGTCGGTCTGGGTTTCCGTACCCCCAAG
ACCGCCATTGAGGGCTCCTACATCGGTATGCACGACCTATGTTGAAATTT
TATTTGCGGCGTTATCGACTTCCGATCATGCGGGACCAAGACTGGGAATC
TTTTGGAGGCTATGGCGAGATGAGAATATGCCGCATGGAGAAGAGAGAAA
TCACCTGGAAAGCGCCAGCATGAGTCTACGATAAAATGCAACTATCTTCT
GCAAAGGATCGGGATGGAATGCGACAAGAGAAGGAATCAAAGATCAGACC
TGGAAAAAGCGCTTGGCGACAGATTTGCGGAACCCGGTTATTCTCATCTC
TCAAAGGCTCCGGAGAAGTCCAGTCATGTCGTTTGAAATCTCCAGGTGGG
ACATATCACTGATATCGAACAGACAAGAAGTGCCCCTTCACCGGTCTGGT
TTCCATCCGTGGCCGTATCCTGACCGGCCGTGTCGTCTCCACCAAGATGC
ACCGTACCATCGTCATCCGCCGTGAATACCTCCACTACGTCCCCAAGTAC
AACCGTTACGAGAAGAGACACAAGAACCTTGCCGCTCACGTCTCTCCCGC
TTTCCGTGTTGAGGAAGGTGACTGGGTCACCGTCGGCCAGTGCCGCCCCC
TGAGCAAGACTGTACGTCAAACTTTCCTCGGGATATCTTCTATGGTTACT
GGTGGCAAATGCATTCCTTTCCTATACGCCTGAAAGGATATGGATGATGT
CCAGCGCTATCGAAGATATTCTACATGGATCGCAAAAATATATACGTCAG
ATGCGCTAACTTACTATTCAGGTCCGCTTCAACGTCCTCCGTGTCCTGCC
CCGTACCGGCAAGGCCGTCAAGGCTTTCTCCAAGTTCTAA
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Coding sequence (CDS) from alignment at MCQH01000043:13954..14943-

>ATCC10864_001929-T1 ID=ATCC10864_001929-T1|Name=ATCC10864_001929-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1449bp|location=Sequence derived from alignment at MCQH01000043:13954..14943- (Aspergillus niger ATCC 10864)
GTCCGCTTCAACGTCCTCCGTGTCCTGCCCCGTACCGGCAAGGCCGTCAA
GGCTTTCTCCAAGTTCTAAACAAGAAGTGCCCCTTCACCGGTCTGGTTTC
CATCCGTGGCCGTATCCTGACCGGCCGTGTCGTCTCCACCAAGATGCACC
GTACCATCGTCATCCGCCGTGAATACCTCCACTACGTCCCCAAGTACAAC
CGTTACGAGAAGAGACACAAGAACCTTGCCGCTCACGTCTCTCCCGCTTT
CCGTGTTGAGGAAGGTGACTGGGTCACCGTCGGCCAGTGCCGCCCCCTGA
GCAAGACTATGGCGACCGAGTTGACCGTCCAGTCGGAACGTGCGTTCCAG
AAGCAGCCTCACATCTTCGTCAACCCCAAGGCTCAGGCGAAGAGCAAGAA
GGTTGGCACCGGCCGCCGTTGGTACAAGGATGTCGGTCTGGGTTTCCGTA
CCCCCAAGACCGCCATTGAGGGCTCCTACATCGGTCCGCTTCAACGTCCT
CCGTGTCCTGCCCCGTACCGGCAAGGCCGTCAAGGCTTTCTCCAAGTTCT
AAACAAGAAGTGCCCCTTCACCGGTCTGGTTTCCATCCGTGGCCGTATCC
TGACCGGCCGTGTCGTCTCCACCAAGATGCACCGTACCATCGTCATCCGC
CGTGAATACCTCCACTACGTCCCCAAGTACAACCGTTACGAGAAGAGACA
CAAGAACCTTGCCGCTCACGTCTCTCCCGCTTTCCGTGTTGAGGAAGGTG
ACTGGGTCACCGTCGGCCAGTGCCGCCCCCTGAGCAAGACTATGGCGACC
GAGTTGACCGTCCAGTCGGAACGTGCGTTCCAGAAGCAGCCTCACATCTT
CGTCAACCCCAAGGCTCAGGCGAAGAGCAAGAAGGTTGGCACCGGCCGCC
GTTGGTACAAGGATGTCGGTCTGGGTTTCCGTACCCCCAAGACCGCCATT
GAGGGCTCCTACATCGGTCCGCTTCAACGTCCTCCGTGTCCTGCCCCGTA
CCGGCAAGGCCGTCAAGGCTTTCTCCAAGTTCTAAACAAGAAGTGCCCCT
TCACCGGTCTGGTTTCCATCCGTGGCCGTATCCTGACCGGCCGTGTCGTC
TCCACCAAGATGCACCGTACCATCGTCATCCGCCGTGAATACCTCCACTA
CGTCCCCAAGTACAACCGTTACGAGAAGAGACACAAGAACCTTGCCGCTC
ACGTCTCTCCCGCTTTCCGTGTTGAGGAAGGTGACTGGGTCACCGTCGGC
CAGTGCCGCCCCCTGAGCAAGACTATGGCGACCGAGTTGACCGTCCAGTC
GGAACGTGCGTTCCAGAAGCAGCCTCACATCTTCGTCAACCCCAAGGCTC
AGGCGAAGAGCAAGAAGGTTGGCACCGGCCGCCGTTGGTACAAGGATGTC
GGTCTGGGTTTCCGTACCCCCAAGACCGCCATTGAGGGCTCCTACATCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS11AATCC10864_001929Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001929-T1ATCC10864_001929-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001929-T1.cdsATCC10864_001929-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001929-T1.exon3ATCC10864_001929-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001929-T1.exon2ATCC10864_001929-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001929-T1.exon1ATCC10864_001929-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR032440
InterProIPR019979
PFAMPF16205
InterProIPR012340
InterProIPR000266
InterProIPR028333
PFAMPF00366
Properties
Property NameValue
NoteBUSCO:EOG092653NM
Productribosomal 40S subunit protein S11A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000043supercontigMCQH01000043:13954..14943 -
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