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ATCC10864_001933-T1, ATCC10864_001933-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001933-T1
Unique NameATCC10864_001933-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000043:32390..33708-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001933-T1 ID=ATCC10864_001933-T1|Name=ATCC10864_001933-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1319bp|location=Sequence derived from alignment at MCQH01000043:32390..33708- (Aspergillus niger ATCC 10864)
ATGCATCGCACCTATTCTATGCGCCAGTCGCGCCTGCCGACGGCCTCGCA
GATTGAGAATCCTCCTCCGCCATTGTCTTCCACCAAGACAAACAGAATCT
TTGGAAAGGGCGGTTTTGGTGAGTCGTCTCCTGGAATGGTCGGGTCTTTG
TTCTGGATGGAGGCCAATGGCTCTGGTCACTCCCCTATGCTAGGGGTCTG
GACAACTGCTATTTGCTGAGAATAGGCTGGGCCTTGTATGGTGATTATAC
TGACATGTGTCAATCCAGGCCATGCCTTGCGCAAGAACACGGCTGGCGCC
TTCGGGCCTGACCTCGCCAGAAAACTCTCCCAATTGGTGAAGATGGAGAA
GAACGTCATGCGCAGCATGGAGATGGTCTCTAGGGAGCGTATGGAAACTG
CTGTATGTTCGCGTACTGGCCTCTACTTGTGAAGTACGACAACTAATTTA
TGGTGCTTGGCAGCAACAACTCTCCATCTGGGGTGAAAACTGCGACGAAG
ATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGGC
GAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCAT
CAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGTA
TGTGCTCTCTGTTCCAAGCTACGGAGTTTCAATACTAACGTGCATACGCT
TATAGGCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGG
ACCCCAACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCC
GAGGCCGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGA
GAAGCTCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATT
GCGAGAAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTG
GTTGATGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGG
CTATGACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCA
ACTGGGTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCG
CGCACCCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGT
CGATCTTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCG
CGGATCAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTG
GCCAGCACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCC
CGTCACGGTGTCTGTTTAA
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Coding sequence (CDS) from alignment at MCQH01000043:32390..33708-

>ATCC10864_001933-T1 ID=ATCC10864_001933-T1|Name=ATCC10864_001933-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4200bp|location=Sequence derived from alignment at MCQH01000043:32390..33708- (Aspergillus niger ATCC 10864)
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
GCAAGCAGAAGATCACCGATGAAATTGCTAAGCTCAAGTACAAGGACCCC
AACTCTCCCCGCATCGTCGTTCTGGAGCAAGAGCTTGTCCGTGCCGAGGC
CGAATCCCTCGTGGCCGAAGCCCAGCTCTCCAACATCACTCGTGAGAAGC
TCAAGGCAGCCTTCCAGTACCAGTTCGATGCGCTCAGGGAGCATTGCGAG
AAGGTGGCCCTCATCGCTGGTTACGGCAAGCACCTCTTGGACCTGGTTGA
TGACACGCCGGTTACTCCCGGCGAAACTCGCCATGCCTATGATGGCTATG
ACGCCAGCAAAGCTATCATCCAAGACTGTGAGGAAGCCCTTGCCAACTGG
GTTACCTCCAAGGCATCGGTCAAGCCCACTCTCTCGCAGCGCTCGCGCAC
CCTGTCCCAGCGTCACCGTGAGACCCTCAAGGGCCGTGAAGGCGTCGATC
TTTCCGGACAGGACCAGCCCATGGGCCGTGACTCTTGGGTACCCGCGGAT
CAGCATGCGACCTACCAGCACGAGGTAGAGGACGGTGAGGAAGTGGCCAG
CACCGTTGATGGAGAGTCGCGGGGTCGAGAAGAGGAGCGGGAGCCCGTCA
CGGTGTCTGTTTAACAACAACTCTCCATCTGGGGTGAAAACTGCGACGAA
GATGTTTCCGATGTCACCGACAAGCTGGGCGTCTTGCTCTACGAGATTGG
CGAATTGGAAGATCTCTTCGTCGACCGCTATGACCAGTACCGTGTCACCA
TCAAGAGCATCCGCAACATTGAGGCTTCTGTTCAGCCCAGCCGCGACCGC
CATGCCTTGCGCAAGAACACGGCTGGCGCCTTCGGGCCTGACCTCGCCAG
AAAACTCTCCCAATTGGTGAAGATGGAGAAGAACGTCATGCGCAGCATGG
AGATGGTCTCTAGGGAGCGTATGGAAACTGCTATGCATCGCACCTATTCT
ATGCGCCAGTCGCGCCTGCCGACGGCCTCGCAGATTGAGAATCCTCCTCC
GCCATTGTCTTCCACCAAGACAAACAGAATCTTTGGAAAGGGCGGTTTTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PIL1ATCC10864_001933Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001933-T1ATCC10864_001933-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001933-T1.cdsATCC10864_001933-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001933-T1.exon4ATCC10864_001933-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001933-T1.exon3ATCC10864_001933-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001933-T1.exon2ATCC10864_001933-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001933-T1.exon1ATCC10864_001933-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027267
InterProIPR028245
PFAMPF13805
Properties
Property NameValue
ProductEisosome core component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000043supercontigMCQH01000043:32390..33708 -
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