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ATCC10864_001942-T1, ATCC10864_001942-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001942-T1
Unique NameATCC10864_001942-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000043:57707..58677+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001942-T1 ID=ATCC10864_001942-T1|Name=ATCC10864_001942-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=971bp|location=Sequence derived from alignment at MCQH01000043:57707..58677+ (Aspergillus niger ATCC 10864)
ATGTCCTCCATGCGCAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGG
TCAGCTCGAAGGCCGTGAGAAATGGGGTATTCTCGAAAAGCACAAGGTAC
ATACATACCTTCACTTTCTTGCCATAGCCCCCCATTGCCGAAGTATTCTG
CAGTACTAATAGAAATGAAATCTTAGGATTACTCCCTCCGCGCGAAAGAC
TACAACACGAAGAAAGAGAAAATTAAGCGCCTCCAAGAAAAAGTCCGCGA
CCGCAACCCCGATGAATTCGCCTTCGGAATGATGTCGAGTTCGTCCGCTC
GACAAGGCAAACACGGCGCTGCGGGAAACCGCGACTCGGCTGCCGCGCGC
GGTCTCAGCCACGATGCCATTAAGTTGCTCAAGACACAGGATGCGGGGTA
CCTGCGGACAGTTGGGGAGCGGATCCGACGACAGATGGAGAAGTTGGAGG
AGGAGGTGCGGTTGCAGGATGGGATGAAGGAGATCCTGGATGGGGATGTT
GGGGAGGATAAGAAGAAAGAGGAGGACGTGATGGATGACGATGATATGGA
CTTTGATTTCGATTTCGGGGATGATGAGGTGGATCAGAAGAAGAATAAGA
AGAGCAGGAAATTGGTGTTTGCGGATGATCGGAAGGAGCAGAGGGTGTTG
AGGAAGAAGAAGTTACGTGAGGAAGAAGAAGATGATGATGATGAGGAAGA
GGATGATTCGTTCGGAAAGCAGGTGATGAAAAAGTCGAGGAAGCAGTTGG
AGGCGGAGAGACAGGCGCTTGTGGAGGCTCGTCGGGCTCGCAAAATGAAG
AAGCGTGCGGCAGAGGCGCGGATGAACAAGCTCAAGGCGCTGCAGAAGCA
GTACAAGGAGATCACGGCCGCGGAGCGCGAGCTGGATTGGCAGCGTGGTC
GGATGGATAATGTGGTGGGTGGCACGAATAAGAATGGTGTCAAGTGGAAG
ATCCGTGAGCGGAAGAAGTGA
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Coding sequence (CDS) from alignment at MCQH01000043:57707..58677+

>ATCC10864_001942-T1 ID=ATCC10864_001942-T1|Name=ATCC10864_001942-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1782bp|location=Sequence derived from alignment at MCQH01000043:57707..58677+ (Aspergillus niger ATCC 10864)
ATGTCCTCCATGCGCAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGG
TCAGCTCGAAGGCCGTGAGAAATGGGGTATTCTCGAAAAGCACAAGGATT
ACTCCCTCCGCGCGAAAGACTACAACACGAAGAAAGAGAAAATTAAGCGC
CTCCAAGAAAAAGTCCGCGACCGCAACCCCGATGAATTCGCCTTCGGAAT
GATGTCGAGTTCGTCCGCTCGACAAGGCAAACACGGCGCTGCGGGAAACC
GCGACTCGGCTGCCGCGCGCGGTCTCAGCCACGATGCCATTAAGTTGCTC
AAGACACAGGATGCGGGGTACCTGCGGACAGTTGGGGAGCGGATCCGACG
ACAGATGGAGAAGTTGGAGGAGGAGGTGCGGTTGCAGGATGGGATGAAGG
AGATCCTGGATGGGGATGTTGGGGAGGATAAGAAGAAAGAGGAGGACGTG
ATGGATGACGATGATATGGACTTTGATTTCGATTTCGGGGATGATGAGGT
GGATCAGAAGAAGAATAAGAAGAGCAGGAAATTGGTGTTTGCGGATGATC
GGAAGGAGCAGAGGGTGTTGAGGAAGAAGAAGTTACGTGAGGAAGAAGAA
GATGATGATGATGAGGAAGAGGATGATTCGTTCGGAAAGCAGGTGATGAA
AAAGTCGAGGAAGCAGTTGGAGGCGGAGAGACAGGCGCTTGTGGAGGCTC
GTCGGGCTCGCAAAATGAAGAAGCGTGCGGCAGAGGCGCGGATGAACAAG
CTCAAGGCGCTGCAGAAGCAGTACAAGGAGATCACGGCCGCGGAGCGCGA
GCTGGATTGGCAGCGTGGTCGGATGGATAATGTGGTGGGTGGCACGAATA
AGAATGGTGTCAAGTGGAAGATCCGTGAGCGGAAGAAGTGAATGTCCTCC
ATGCGCAACGCCGTTCAGCGGCGCAACCACCGCGAGCGTGGTCAGCTCGA
AGGCCGTGAGAAATGGGGTATTCTCGAAAAGCACAAGGATTACTCCCTCC
GCGCGAAAGACTACAACACGAAGAAAGAGAAAATTAAGCGCCTCCAAGAA
AAAGTCCGCGACCGCAACCCCGATGAATTCGCCTTCGGAATGATGTCGAG
TTCGTCCGCTCGACAAGGCAAACACGGCGCTGCGGGAAACCGCGACTCGG
CTGCCGCGCGCGGTCTCAGCCACGATGCCATTAAGTTGCTCAAGACACAG
GATGCGGGGTACCTGCGGACAGTTGGGGAGCGGATCCGACGACAGATGGA
GAAGTTGGAGGAGGAGGTGCGGTTGCAGGATGGGATGAAGGAGATCCTGG
ATGGGGATGTTGGGGAGGATAAGAAGAAAGAGGAGGACGTGATGGATGAC
GATGATATGGACTTTGATTTCGATTTCGGGGATGATGAGGTGGATCAGAA
GAAGAATAAGAAGAGCAGGAAATTGGTGTTTGCGGATGATCGGAAGGAGC
AGAGGGTGTTGAGGAAGAAGAAGTTACGTGAGGAAGAAGAAGATGATGAT
GATGAGGAAGAGGATGATTCGTTCGGAAAGCAGGTGATGAAAAAGTCGAG
GAAGCAGTTGGAGGCGGAGAGACAGGCGCTTGTGGAGGCTCGTCGGGCTC
GCAAAATGAAGAAGCGTGCGGCAGAGGCGCGGATGAACAAGCTCAAGGCG
CTGCAGAAGCAGTACAAGGAGATCACGGCCGCGGAGCGCGAGCTGGATTG
GCAGCGTGGTCGGATGGATAATGTGGTGGGTGGCACGAATAAGAATGGTG
TCAAGTGGAAGATCCGTGAGCGGAAGAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001942ATCC10864_001942Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001942-T1.exon1ATCC10864_001942-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001942-T1.exon2ATCC10864_001942-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001942-T1.cdsATCC10864_001942-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001942-T1ATCC10864_001942-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007144
PFAMPF03998
Properties
Property NameValue
NoteBUSCO:EOG09264CA0
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000043supercontigMCQH01000043:57707..58677 +
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