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ATCC10864_001944-T1, ATCC10864_001944-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001944-T1
Unique NameATCC10864_001944-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000043:63952..65545+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001944-T1 ID=ATCC10864_001944-T1|Name=ATCC10864_001944-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1594bp|location=Sequence derived from alignment at MCQH01000043:63952..65545+ (Aspergillus niger ATCC 10864)
ATGCATCTCAGCTCGCTTTCCTTGTCCCTGACGGCCTTGGCCATCGTCAG
TCCTTCTGCTGCTTATCCTCACTTGGGTTCTTCCCAGCCTGTGCTTCACA
CTAATTCCGACACCACTCAATCGCGCGCAGACGCCATCAAGGCTGCCTTC
TCGCACGCCTGGGATGGCTACCTCCAATACGCCTTCCCTCATGACGAGCT
GCACCCCGTCTCGAATGGCTATGGCGACTCCCGGAATGGATGGGGCGCCT
CTGCCGTGGATGCACTCTCCACAGCAGTGATTATGCGCAATGCTACCATT
GTCAATCAGATCCTGGACCACGTGGCCAAGATTGACTACTCCAAGACAAA
CACCACCGTGAGCCTCTTCGAGACCACCATCCGCTACCTGGGTGGCATGC
TGTCCGGATATGACCTGCTGAAGGGGCCCGTGTCCGACCTGGTGCAAGAC
TCGTCGAAAATCGACGTGCTCTTGACCCAATCGAAGAACCTCGGCGACGT
TCTCAAATTCGCCTTCGATACACCCTCGGGGGTTCCATACAACAATCTCA
ACATTACCTCAGGGGGGAATGATGGAGCCAAGACCAATGGTCTTGCTGTG
ACGGGTACACTGGCGCTGGAATGGACGCGCCTGTCGGACCTTACGGGTGA
CACCACGTATGCCGACCTGAGCCAGAAGGCCGAGTCTTACCTCCTCAACC
CGCAGCCTAAGTCTGCGGAGCCATTCCCGGGCTTGGTAGGAAGCAACATC
AACATCAGTAATGGGCAGTTCACGGATGCGCAGGTGAGCTGGAATGGCGG
CGATGACTCTTACTACGAGTACCTGATCAAAATGTACGTATACGACCCCA
AGCGGTTCGGTCTCTATAAAGACCGCTGGGTGGCCGCGGCGCAATCGACC
ATGCAGCATCTGGCGTCGCACCCCTCGACCCGCCCGGACCTGACCTTCCT
GGCCTCCTACAACAACGGAACTTTGGGGTTGAGCTCGCAGCACCTGACTT
GCTTCGACGGAGGTAGCTTCCTGTTGGGAGGCACCGTGCTGAACCGGACG
GATTTCATTAATTTCGGCCTGGACCTAGTGAGCGGGTGTCATGATACATA
CAACTCGACGTTGACGGGAATTGGCCCGGAGTCGTTCAGCTGGGATACCA
GCGACATCCCCTCGAGCCAGCAGTCGCTCTACGAGAAAGCCGGATTCTAC
ATTACTAGTGGCGCGTACATTTTGCGCCCGGAAGTGATTGAGAGTTTCTA
CTATGCCTGGAGAGCTACCGGGCAGGAAACGGTAAGTTCGACTTCTCCCC
CTTTGGCTCAATAGTAACTAACAACCATATCAGTACCGGGAATGGATCTG
GAGCGCATTCAGCGCAGTCAACGACTACTGCCGCACCGACTCTGGATTTT
CAGGTCTGACTGACGTGAACGCGGCCAACGGCGGCAGCCGGTACGACAAC
CAGGAGAGTTTCCTGTTTGCCGAGGTGATGAAGTATTCGTACATGGCGTT
CGCGGAAGATGCAGCCTGGCAGGTGCAGCCCGGCAGCGGGAACCAATTTG
TGTTCAACACCGAGGCACACCCAGTGCGGGTGAGTAGTACATAA
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Coding sequence (CDS) from alignment at MCQH01000043:63952..65545+

>ATCC10864_001944-T1 ID=ATCC10864_001944-T1|Name=ATCC10864_001944-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3084bp|location=Sequence derived from alignment at MCQH01000043:63952..65545+ (Aspergillus niger ATCC 10864)
ATGCATCTCAGCTCGCTTTCCTTGTCCCTGACGGCCTTGGCCATCGTCAG
TCCTTCTGCTGCTTATCCTCACTTGGGTTCTTCCCAGCCTGTGCTTCACA
CTAATTCCGACACCACTCAATCGCGCGCAGACGCCATCAAGGCTGCCTTC
TCGCACGCCTGGGATGGCTACCTCCAATACGCCTTCCCTCATGACGAGCT
GCACCCCGTCTCGAATGGCTATGGCGACTCCCGGAATGGATGGGGCGCCT
CTGCCGTGGATGCACTCTCCACAGCAGTGATTATGCGCAATGCTACCATT
GTCAATCAGATCCTGGACCACGTGGCCAAGATTGACTACTCCAAGACAAA
CACCACCGTGAGCCTCTTCGAGACCACCATCCGCTACCTGGGTGGCATGC
TGTCCGGATATGACCTGCTGAAGGGGCCCGTGTCCGACCTGGTGCAAGAC
TCGTCGAAAATCGACGTGCTCTTGACCCAATCGAAGAACCTCGGCGACGT
TCTCAAATTCGCCTTCGATACACCCTCGGGGGTTCCATACAACAATCTCA
ACATTACCTCAGGGGGGAATGATGGAGCCAAGACCAATGGTCTTGCTGTG
ACGGGTACACTGGCGCTGGAATGGACGCGCCTGTCGGACCTTACGGGTGA
CACCACGTATGCCGACCTGAGCCAGAAGGCCGAGTCTTACCTCCTCAACC
CGCAGCCTAAGTCTGCGGAGCCATTCCCGGGCTTGGTAGGAAGCAACATC
AACATCAGTAATGGGCAGTTCACGGATGCGCAGGTGAGCTGGAATGGCGG
CGATGACTCTTACTACGAGTACCTGATCAAAATGTACGTATACGACCCCA
AGCGGTTCGGTCTCTATAAAGACCGCTGGGTGGCCGCGGCGCAATCGACC
ATGCAGCATCTGGCGTCGCACCCCTCGACCCGCCCGGACCTGACCTTCCT
GGCCTCCTACAACAACGGAACTTTGGGGTTGAGCTCGCAGCACCTGACTT
GCTTCGACGGAGGTAGCTTCCTGTTGGGAGGCACCGTGCTGAACCGGACG
GATTTCATTAATTTCGGCCTGGACCTAGTGAGCGGGTGTCATGATACATA
CAACTCGACGTTGACGGGAATTGGCCCGGAGTCGTTCAGCTGGGATACCA
GCGACATCCCCTCGAGCCAGCAGTCGCTCTACGAGAAAGCCGGATTCTAC
ATTACTAGTGGCGCGTACATTTTGCGCCCGGAAGTGATTGAGAGTTTCTA
CTATGCCTGGAGAGCTACCGGGCAGGAAACGTACCGGGAATGGATCTGGA
GCGCATTCAGCGCAGTCAACGACTACTGCCGCACCGACTCTGGATTTTCA
GGTCTGACTGACGTGAACGCGGCCAACGGCGGCAGCCGGTACGACAACCA
GGAGAGTTTCCTGTTTGCCGAGGTGATGAAGTATTCGTACATGGCGTTCG
CGGAAGATGCAGCCTGGCAGGTGCAGCCCGGCAGCGGGAACCAATTTGTG
TTCAACACCGAGGCACACCCAGTGCGGGTGAGTAGTACATAAATGCATCT
CAGCTCGCTTTCCTTGTCCCTGACGGCCTTGGCCATCGTCAGTCCTTCTG
CTGCTTATCCTCACTTGGGTTCTTCCCAGCCTGTGCTTCACACTAATTCC
GACACCACTCAATCGCGCGCAGACGCCATCAAGGCTGCCTTCTCGCACGC
CTGGGATGGCTACCTCCAATACGCCTTCCCTCATGACGAGCTGCACCCCG
TCTCGAATGGCTATGGCGACTCCCGGAATGGATGGGGCGCCTCTGCCGTG
GATGCACTCTCCACAGCAGTGATTATGCGCAATGCTACCATTGTCAATCA
GATCCTGGACCACGTGGCCAAGATTGACTACTCCAAGACAAACACCACCG
TGAGCCTCTTCGAGACCACCATCCGCTACCTGGGTGGCATGCTGTCCGGA
TATGACCTGCTGAAGGGGCCCGTGTCCGACCTGGTGCAAGACTCGTCGAA
AATCGACGTGCTCTTGACCCAATCGAAGAACCTCGGCGACGTTCTCAAAT
TCGCCTTCGATACACCCTCGGGGGTTCCATACAACAATCTCAACATTACC
TCAGGGGGGAATGATGGAGCCAAGACCAATGGTCTTGCTGTGACGGGTAC
ACTGGCGCTGGAATGGACGCGCCTGTCGGACCTTACGGGTGACACCACGT
ATGCCGACCTGAGCCAGAAGGCCGAGTCTTACCTCCTCAACCCGCAGCCT
AAGTCTGCGGAGCCATTCCCGGGCTTGGTAGGAAGCAACATCAACATCAG
TAATGGGCAGTTCACGGATGCGCAGGTGAGCTGGAATGGCGGCGATGACT
CTTACTACGAGTACCTGATCAAAATGTACGTATACGACCCCAAGCGGTTC
GGTCTCTATAAAGACCGCTGGGTGGCCGCGGCGCAATCGACCATGCAGCA
TCTGGCGTCGCACCCCTCGACCCGCCCGGACCTGACCTTCCTGGCCTCCT
ACAACAACGGAACTTTGGGGTTGAGCTCGCAGCACCTGACTTGCTTCGAC
GGAGGTAGCTTCCTGTTGGGAGGCACCGTGCTGAACCGGACGGATTTCAT
TAATTTCGGCCTGGACCTAGTGAGCGGGTGTCATGATACATACAACTCGA
CGTTGACGGGAATTGGCCCGGAGTCGTTCAGCTGGGATACCAGCGACATC
CCCTCGAGCCAGCAGTCGCTCTACGAGAAAGCCGGATTCTACATTACTAG
TGGCGCGTACATTTTGCGCCCGGAAGTGATTGAGAGTTTCTACTATGCCT
GGAGAGCTACCGGGCAGGAAACGTACCGGGAATGGATCTGGAGCGCATTC
AGCGCAGTCAACGACTACTGCCGCACCGACTCTGGATTTTCAGGTCTGAC
TGACGTGAACGCGGCCAACGGCGGCAGCCGGTACGACAACCAGGAGAGTT
TCCTGTTTGCCGAGGTGATGAAGTATTCGTACATGGCGTTCGCGGAAGAT
GCAGCCTGGCAGGTGCAGCCCGGCAGCGGGAACCAATTTGTGTTCAACAC
CGAGGCACACCCAGTGCGGGTGAGTAGTACATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004571mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MNS1BATCC10864_001944Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001944-T1.exon1ATCC10864_001944-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001944-T1.exon2ATCC10864_001944-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001944-T1.cdsATCC10864_001944-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001944-T1ATCC10864_001944-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01532
InterProIPR036026
InterProIPR001382
InterProIPR012341
Properties
Property NameValue
NoteCAZy:GH47
NoteSECRETED:SignalP(1-21)
Productmaturation of Asn-linked oligosaccharides protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000043supercontigMCQH01000043:63952..65545 +
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