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ATCC10864_001956-T1, ATCC10864_001956-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001956-T1
Unique NameATCC10864_001956-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000043:107506..110190-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001956-T1 ID=ATCC10864_001956-T1|Name=ATCC10864_001956-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2685bp|location=Sequence derived from alignment at MCQH01000043:107506..110190- (Aspergillus niger ATCC 10864)
ATGGCCATGAAGGGTGATACTGCTTGTCTGGTATGCCAGTGGTCCAATCA
CGCTTCTGTTGACCTAGCTAATATGTCTAGGCAGGGATCGCCTGTGGACC
GATGACATTGACTACGCGACTGATCGTTGCTCATACGGATGCCATTGGTG
AGGGAGCGAAGCCTGTGTTCAAGGTATACAGACAGCTGAGTTGCATGAAT
CGCTACAATATTTCTAGCTTACATATGCTAGTATTGTGGGGGAAATAGCC
ATCAATTATGGCATATACCTCGATTATGGGTGCGACAACTGTTAGCCGGG
TGGGCAGCATATGGAGTCCCTCTTAGTTGCCTCACCAAGCACGTGCTGTA
AGGCGGACATGGTGCCTTACGCTTAGGCATACCATAAGGTGACACCAAAG
TTGGGAAGGTCTTTTCTTGCTGGGAGGACTCGCGATCCCGAGGGGTTGTC
AATACTTGGAGTTTATATCCACGATTCCTGAGCAATGGCCGGCTTTTGAA
GCCAGCTGCTGAGAGAAATACTGGAGGGTGCAGGATTTGACGAGCAGATG
CAGTTGCATGCAGCACCGCTTCTCAGTTCGCAGCTAAAGTCTATTTTATC
TACTACTTAGCAGCCCTGCTCTCCCAAGCATGGAATGGCATAGTTTGATG
CTGATAGTCTTACATGTCGGAGCCCGTGGTGCTGGGAAGAGTCCTTGGGA
AAACTTGAAGCGCCATAGTATGCTTAATATTTCAGTGAAGCCGATCCTGG
GGCTGCTCAAAGTCTATCAACTATACCAGTCATATCAGCATTCGGCCTGT
CAAACGTGGGGAAGGCGGGCATTCTCCGCATCGGGATTTGAGGCCGAGCG
TCGATAGCCGACAGTGAACCAGAAAGAGTCATGCCAGTCTCTTCACAGCT
AGAAAGGGAGACGGAGCTATTTTTATTTTCATCTCATTGACACTGGCTTG
AGGATTCATGATATATATTAAGACATAACGCCAAGGACGAAAACGGATGT
CGTCTGCATGTTTGTGCTGATATCAGTTCTCAAGTACTTATCAGTTGCCG
AAAATATTGACCAGTTGGTGAAGGGGTTGAATTCGCATGGGACTGATCTA
TGCAACCCAGATAGGTTTAGCGTCTGCTTTTAGGAGAACAATATTCGATT
AGGGAATGCAACGAAACCAAAACTACCAGCACCTCACTTATTAGAGATAA
GTCTATAAGAGAATATTACATTCAACGTAGATAGCCTTGAGTTACCAAGA
ATAAGTATCGCGACACTTGTAACGCCATCGATCGACGAAATTGACATCGA
AGCAGACAATGAAGTTCCTGCGGACCGAAAGCTAAAGGGCATTACTGCCG
GGCGGTGAGAGCGGCACCTACCCCAAGCCGCCTAGTGTTAGGGCTCCGAT
ACCCTAGGCGGGCGCCAAGAGCGAAAAAGCGCACCACAACGAGCGAGCCT
CGCGATCTCAAGTTCCAGCGGCCGACGACAGGAAAACGACAAAACTTCTC
ACCCGACATCGAGGACCACCCGCTCGGCAACCACATCAAGATGGTGAGTG
CTATATTCGCGTTTGATGCTATCGGTGGAAAATGGACATGTCAAAAAAGC
AAGGGAACAATATCCTGAAAGAAAGAACCGCTGCCCAACCTTTCGTTGTA
CCGGAATCCCTATCTATCATTTTCGATCCTGCGTTTTGGCCGTTGAAGGA
GAAAAAAAAAAGACTTCATACCGAACGATTTTCGACCTTCCCCTGCTATG
ATGAACTTCCGTCCACCGATATGCTATGTTATATGGAATTGTGTGCTTGG
AAAGAGGATATGAATGACATGCGAGGGATTGAATGAATGGTCTTGCTGAT
TGTTGGATTTTGTCGCCATCAGGTCCGTTACGCTGCTCAGGAGATTCCGG
CCGCTAAGAGCGCCCGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAG
AACACCCGTGAGACCGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGC
CCTTACCTTCCTCAACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGC
GTCGGTACGCTGGCAGCACCGGTCGCTGCGCTCAGGGTGAGTGGATGTGT
TTTTCTACGTTGAAGATTTTGGAAAAGAGACGGAAGTGAAAACAACGGAT
CGACAAGTGAACCGACATTGGCAGAATGTTTAGGGATGAAGAGGCTGGAT
GGATACTTTTTTTTGGAGGATATGGCAAAAATCAAACTTTTTGGCAAACG
AAGACGCTGACCGTCTTCTTTCTCTTTAGGCAAGCAGTGGGGTGTCAGCA
AGGCTCGTTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAG
AACGCTGAGGCCAACGCCGACACCAAGGGTCTCGACACCGGCAACCTCGT
TGTCAAGCACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCT
ACCGTGCTCACGGTCGTGTATGTTGAAGCCGGAATCCGAGACATCCCTCC
GTCACGAATCCCCGCAAAACTAACAATTCGATTAGATCAACCCCTACATG
ACCAACCCCTGCCACATCGAGCTCATCCTTACCGAGGGTGAGGAGACCGT
CGCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTG
GTGCTCAGCTCCGCCGTGCTCTCATTGAGGCATAA
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Coding sequence (CDS) from alignment at MCQH01000043:107506..110190-

>ATCC10864_001956-T1 ID=ATCC10864_001956-T1|Name=ATCC10864_001956-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5838bp|location=Sequence derived from alignment at MCQH01000043:107506..110190- (Aspergillus niger ATCC 10864)
ATCAACCCCTACATGACCAACCCCTGCCACATCGAGCTCATCCTTACCGA
GGGTGAGGAGACCGTCGCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCTCA
GCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGTGCTCTCATTGAGGCATAA
GCAAGCAGTGGGGTGTCAGCAAGGCTCGTTGGCCCGTCAAGTCCGCCGAG
TTCCTTCTCGACCTCCTGAAGAACGCTGAGGCCAACGCCGACACCAAGGG
TCTCGACACCGGCAACCTCGTTGTCAAGCACATCCAGGTCAACCAGGCTC
CCAAGGGCCGCCGCCGCACCTACCGTGCTCACGGTCGTGTCCGTTACGCT
GCTCAGGAGATTCCGGCCGCTAAGAGCGCCCGCGCCCGGGGCTCTTACCT
GCGTGTCAGCTTCAAGAACACCCGTGAGACCGCTCAGGCCATCAACGGCA
TGAAGCTGCAGCGCGCCCTTACCTTCCTCAACAACGTCACCGAAAAGGCT
GAGGCTGTCCCCATGCGTCGGTACGCTGGCAGCACCGGTCGCTGCGCTCA
GGGCGGGCGCCAAGAGCGAAAAAGCGCACCACAACGAGCGAGCCTCGCGA
TCTCAAGTTCCAGCGGCCGACGACAGGAAAACGACAAAACTTCTCACCCG
ACATCGAGGACCACCCGCTCGGCAACCACATCAAGATGACAATGAAGTTC
CTGCGGACCGAAAGCTAAAGGGCATTACTGCCGGGCGGCAGGGATCGCCT
GTGGACCGATGACATTGACTACGCGACTGATCGTTGCTCATACGGATGCC
ATTGATGGCCATGAAGGGTGATACTGCTTGTCTGATCAACCCCTACATGA
CCAACCCCTGCCACATCGAGCTCATCCTTACCGAGGGTGAGGAGACCGTC
GCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTGG
TGCTCAGCTCCGCCGTGCTCTCATTGAGGCATAAGCAAGCAGTGGGGTGT
CAGCAAGGCTCGTTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCC
TGAAGAACGCTGAGGCCAACGCCGACACCAAGGGTCTCGACACCGGCAAC
CTCGTTGTCAAGCACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCG
CACCTACCGTGCTCACGGTCGTGTCCGTTACGCTGCTCAGGAGATTCCGG
CCGCTAAGAGCGCCCGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAG
AACACCCGTGAGACCGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGC
CCTTACCTTCCTCAACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGC
GTCGGTACGCTGGCAGCACCGGTCGCTGCGCTCAGGGCGGGCGCCAAGAG
CGAAAAAGCGCACCACAACGAGCGAGCCTCGCGATCTCAAGTTCCAGCGG
CCGACGACAGGAAAACGACAAAACTTCTCACCCGACATCGAGGACCACCC
GCTCGGCAACCACATCAAGATGACAATGAAGTTCCTGCGGACCGAAAGCT
AAAGGGCATTACTGCCGGGCGGCAGGGATCGCCTGTGGACCGATGACATT
GACTACGCGACTGATCGTTGCTCATACGGATGCCATTGATGGCCATGAAG
GGTGATACTGCTTGTCTGATCAACCCCTACATGACCAACCCCTGCCACAT
CGAGCTCATCCTTACCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGCTG
TCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGT
GCTCTCATTGAGGCATAAGCAAGCAGTGGGGTGTCAGCAAGGCTCGTTGG
CCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAGAACGCTGAGGC
CAACGCCGACACCAAGGGTCTCGACACCGGCAACCTCGTTGTCAAGCACA
TCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCTACCGTGCTCAC
GGTCGTGTCCGTTACGCTGCTCAGGAGATTCCGGCCGCTAAGAGCGCCCG
CGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAGAACACCCGTGAGACCG
CTCAGGCCATCAACGGCATGAAGCTGCAGCGCGCCCTTACCTTCCTCAAC
AACGTCACCGAAAAGGCTGAGGCTGTCCCCATGCGTCGGTACGCTGGCAG
CACCGGTCGCTGCGCTCAGGGCGGGCGCCAAGAGCGAAAAAGCGCACCAC
AACGAGCGAGCCTCGCGATCTCAAGTTCCAGCGGCCGACGACAGGAAAAC
GACAAAACTTCTCACCCGACATCGAGGACCACCCGCTCGGCAACCACATC
AAGATGACAATGAAGTTCCTGCGGACCGAAAGCTAAAGGGCATTACTGCC
GGGCGGCAGGGATCGCCTGTGGACCGATGACATTGACTACGCGACTGATC
GTTGCTCATACGGATGCCATTGATGGCCATGAAGGGTGATACTGCTTGTC
TGATCAACCCCTACATGACCAACCCCTGCCACATCGAGCTCATCCTTACC
GAGGGTGAGGAGACCGTCGCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCT
CAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGTGCTCTCATTGAGGCAT
AAGCAAGCAGTGGGGTGTCAGCAAGGCTCGTTGGCCCGTCAAGTCCGCCG
AGTTCCTTCTCGACCTCCTGAAGAACGCTGAGGCCAACGCCGACACCAAG
GGTCTCGACACCGGCAACCTCGTTGTCAAGCACATCCAGGTCAACCAGGC
TCCCAAGGGCCGCCGCCGCACCTACCGTGCTCACGGTCGTGTCCGTTACG
CTGCTCAGGAGATTCCGGCCGCTAAGAGCGCCCGCGCCCGGGGCTCTTAC
CTGCGTGTCAGCTTCAAGAACACCCGTGAGACCGCTCAGGCCATCAACGG
CATGAAGCTGCAGCGCGCCCTTACCTTCCTCAACAACGTCACCGAAAAGG
CTGAGGCTGTCCCCATGCGTCGGTACGCTGGCAGCACCGGTCGCTGCGCT
CAGGGCGGGCGCCAAGAGCGAAAAAGCGCACCACAACGAGCGAGCCTCGC
GATCTCAAGTTCCAGCGGCCGACGACAGGAAAACGACAAAACTTCTCACC
CGACATCGAGGACCACCCGCTCGGCAACCACATCAAGATGACAATGAAGT
TCCTGCGGACCGAAAGCTAAAGGGCATTACTGCCGGGCGGCAGGGATCGC
CTGTGGACCGATGACATTGACTACGCGACTGATCGTTGCTCATACGGATG
CCATTGATGGCCATGAAGGGTGATACTGCTTGTCTGATCAACCCCTACAT
GACCAACCCCTGCCACATCGAGCTCATCCTTACCGAGGGTGAGGAGACCG
TCGCCAAGGGTCCCGCTGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGT
GGTGCTCAGCTCCGCCGTGCTCTCATTGAGGCATAAGCAAGCAGTGGGGT
GTCAGCAAGGCTCGTTGGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCT
CCTGAAGAACGCTGAGGCCAACGCCGACACCAAGGGTCTCGACACCGGCA
ACCTCGTTGTCAAGCACATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGC
CGCACCTACCGTGCTCACGGTCGTGTCCGTTACGCTGCTCAGGAGATTCC
GGCCGCTAAGAGCGCCCGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCA
AGAACACCCGTGAGACCGCTCAGGCCATCAACGGCATGAAGCTGCAGCGC
GCCCTTACCTTCCTCAACAACGTCACCGAAAAGGCTGAGGCTGTCCCCAT
GCGTCGGTACGCTGGCAGCACCGGTCGCTGCGCTCAGGGCGGGCGCCAAG
AGCGAAAAAGCGCACCACAACGAGCGAGCCTCGCGATCTCAAGTTCCAGC
GGCCGACGACAGGAAAACGACAAAACTTCTCACCCGACATCGAGGACCAC
CCGCTCGGCAACCACATCAAGATGACAATGAAGTTCCTGCGGACCGAAAG
CTAAAGGGCATTACTGCCGGGCGGCAGGGATCGCCTGTGGACCGATGACA
TTGACTACGCGACTGATCGTTGCTCATACGGATGCCATTGATGGCCATGA
AGGGTGATACTGCTTGTCTGATCAACCCCTACATGACCAACCCCTGCCAC
ATCGAGCTCATCCTTACCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGC
TGTCAAGGAGGTCCGCCTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCC
GTGCTCTCATTGAGGCATAAGCAAGCAGTGGGGTGTCAGCAAGGCTCGTT
GGCCCGTCAAGTCCGCCGAGTTCCTTCTCGACCTCCTGAAGAACGCTGAG
GCCAACGCCGACACCAAGGGTCTCGACACCGGCAACCTCGTTGTCAAGCA
CATCCAGGTCAACCAGGCTCCCAAGGGCCGCCGCCGCACCTACCGTGCTC
ACGGTCGTGTCCGTTACGCTGCTCAGGAGATTCCGGCCGCTAAGAGCGCC
CGCGCCCGGGGCTCTTACCTGCGTGTCAGCTTCAAGAACACCCGTGAGAC
CGCTCAGGCCATCAACGGCATGAAGCTGCAGCGCGCCCTTACCTTCCTCA
ACAACGTCACCGAAAAGGCTGAGGCTGTCCCCATGCGTCGGTACGCTGGC
AGCACCGGTCGCTGCGCTCAGGGCGGGCGCCAAGAGCGAAAAAGCGCACC
ACAACGAGCGAGCCTCGCGATCTCAAGTTCCAGCGGCCGACGACAGGAAA
ACGACAAAACTTCTCACCCGACATCGAGGACCACCCGCTCGGCAACCACA
TCAAGATGACAATGAAGTTCCTGCGGACCGAAAGCTAAAGGGCATTACTG
CCGGGCGGCAGGGATCGCCTGTGGACCGATGACATTGACTACGCGACTGA
TCGTTGCTCATACGGATGCCATTGATGGCCATGAAGGGTGATACTGCTTG
TCTGATCAACCCCTACATGACCAACCCCTGCCACATCGAGCTCATCCTTA
CCGAGGGTGAGGAGACCGTCGCCAAGGGTCCCGCTGTCAAGGAGGTCCGC
CTCAGCTCCCGCCAGCGTGGTGCTCAGCTCCGCCGTGCTCTCATTGAGGC
ATAAGCAAGCAGTGGGGTGTCAGCAAGGCTCGTTGGCCCGTCAAGTCCGC
CGAGTTCCTTCTCGACCTCCTGAAGAACGCTGAGGCCAACGCCGACACCA
AGGGTCTCGACACCGGCAACCTCGTTGTCAAGCACATCCAGGTCAACCAG
GCTCCCAAGGGCCGCCGCCGCACCTACCGTGCTCACGGTCGTGTCCGTTA
CGCTGCTCAGGAGATTCCGGCCGCTAAGAGCGCCCGCGCCCGGGGCTCTT
ACCTGCGTGTCAGCTTCAAGAACACCCGTGAGACCGCTCAGGCCATCAAC
GGCATGAAGCTGCAGCGCGCCCTTACCTTCCTCAACAACGTCACCGAAAA
GGCTGAGGCTGTCCCCATGCGTCGGTACGCTGGCAGCACCGGTCGCTGCG
CTCAGGGCGGGCGCCAAGAGCGAAAAAGCGCACCACAACGAGCGAGCCTC
GCGATCTCAAGTTCCAGCGGCCGACGACAGGAAAACGACAAAACTTCTCA
CCCGACATCGAGGACCACCCGCTCGGCAACCACATCAAGATGACAATGAA
GTTCCTGCGGACCGAAAGCTAAAGGGCATTACTGCCGGGCGGCAGGGATC
GCCTGTGGACCGATGACATTGACTACGCGACTGATCGTTGCTCATACGGA
TGCCATTGATGGCCATGAAGGGTGATACTGCTTGTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL17ATCC10864_001956Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001956-T1ATCC10864_001956-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001956-T1.cdsATCC10864_001956-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001956-T1.exon7ATCC10864_001956-T1.exon7Aspergillus niger ATCC 10864exon
ATCC10864_001956-T1.exon6ATCC10864_001956-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_001956-T1.exon5ATCC10864_001956-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_001956-T1.exon4ATCC10864_001956-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001956-T1.exon3ATCC10864_001956-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001956-T1.exon2ATCC10864_001956-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001956-T1.exon1ATCC10864_001956-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018260
InterProIPR036394
InterProIPR001063
PFAMPF00237
InterProIPR005721
Properties
Property NameValue
Product60S ribosomal protein L17
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000043supercontigMCQH01000043:107506..110190 -
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