You are here

Home

ATCC10864_001958-T1, ATCC10864_001958-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001958-T1
Unique NameATCC10864_001958-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000043:114303..115308+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001958-T1 ID=ATCC10864_001958-T1|Name=ATCC10864_001958-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1006bp|location=Sequence derived from alignment at MCQH01000043:114303..115308+ (Aspergillus niger ATCC 10864)
ATGTCGGCAGCAGTTGCGTCGCTATTTTCCCTCAGCGGCAAGACCGCCAT
CGTGACAGGAGGAACTAGGGGCATTGGGCAGGCAATGGCTTTTGCCCTTG
CAGAAGCTGGTGCCGATATCATCTTGATTCAGGTGCGCACAGCCGCGACC
TCCCCATTGGCGCCCACGGAAATGAGAGGGGAGCCATGACGAAACGTTGT
GTGGAACTAACGGTCTGCGAGCAGAGAGACGAGTCGAACACATCGACTCG
CGATGAGATCGTCAATCGCATCGGCAAGAAAGCTTGGATCCACGTGGCAG
AGTTGTCGAATCGGGAATCGATCAAGGGTGTCATTCCAGCTCTGACCAGT
CAAGGCCTCAAGCCAGAGATCCTACTCAACTGCGCCGGAATTCAACGGAG
ACACCCCAGTGAAAAGTTCCCGGACGAAGATTGGGATGAGGTAGGTGTAA
AATGACTCTCCTATTTCAGCCACCTATTTACCCCTCTCTATTTTTGGACC
TCCCCTTCTCCTGAAGTGGAGCTGAAGACTAGTATACTAACTATTGATTT
ATATAGGTTATCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGA
GTTCGGTGCATACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTC
GTCGTGGAGCTATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGT
ATCACGGTACCTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGAC
GAAGGCCCTCTCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAA
TTGCTCCTGGATACATCGCCACAGATATGAACACTGACCTGATTAACGAT
TCCAACCGCAATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGG
CAAGCCAGAGGACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGA
GTAGCTATGTCTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGA
CGGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000043:114303..115308+

>ATCC10864_001958-T1 ID=ATCC10864_001958-T1|Name=ATCC10864_001958-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2394bp|location=Sequence derived from alignment at MCQH01000043:114303..115308+ (Aspergillus niger ATCC 10864)
ATGTCGGCAGCAGTTGCGTCGCTATTTTCCCTCAGCGGCAAGACCGCCAT
CGTGACAGGAGGAACTAGGGGCATTGGGCAGGCAATGGCTTTTGCCCTTG
CAGAAGCTGGTGCCGATATCATCTTGATTCAGAGAGACGAGTCGAACACA
TCGACTCGCGATGAGATCGTCAATCGCATCGGCAAGAAAGCTTGGATCCA
CGTGGCAGAGTTGTCGAATCGGGAATCGATCAAGGGTGTCATTCCAGCTC
TGACCAGTCAAGGCCTCAAGCCAGAGATCCTACTCAACTGCGCCGGAATT
CAACGGAGACACCCCAGTGAAAAGTTCCCGGACGAAGATTGGGATGAGGT
TATCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGAGTTCGGTG
CATACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTCGTCGTGGA
GCTATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGTATCACGGT
ACCTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGACGAAGGCCC
TCTCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAATTGCTCCT
GGATACATCGCCACAGATATGAACACTGACCTGATTAACGATTCCAACCG
CAATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGGCAAGCCAG
AGGACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGAGTAGCTAT
GTCTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGACGGTGAAT
GTCGGCAGCAGTTGCGTCGCTATTTTCCCTCAGCGGCAAGACCGCCATCG
TGACAGGAGGAACTAGGGGCATTGGGCAGGCAATGGCTTTTGCCCTTGCA
GAAGCTGGTGCCGATATCATCTTGATTCAGAGAGACGAGTCGAACACATC
GACTCGCGATGAGATCGTCAATCGCATCGGCAAGAAAGCTTGGATCCACG
TGGCAGAGTTGTCGAATCGGGAATCGATCAAGGGTGTCATTCCAGCTCTG
ACCAGTCAAGGCCTCAAGCCAGAGATCCTACTCAACTGCGCCGGAATTCA
ACGGAGACACCCCAGTGAAAAGTTCCCGGACGAAGATTGGGATGAGGTTA
TCCAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGAGTTCGGTGCA
TACTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTCGTCGTGGAGC
TATCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGTATCACGGTAC
CTGCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGACGAAGGCCCTC
TCCAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAATTGCTCCTGG
ATACATCGCCACAGATATGAACACTGACCTGATTAACGATTCCAACCGCA
ATGCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGGCAAGCCAGAG
GACTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGAGTAGCTATGT
CTCAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGACGGTGAATGT
CGGCAGCAGTTGCGTCGCTATTTTCCCTCAGCGGCAAGACCGCCATCGTG
ACAGGAGGAACTAGGGGCATTGGGCAGGCAATGGCTTTTGCCCTTGCAGA
AGCTGGTGCCGATATCATCTTGATTCAGAGAGACGAGTCGAACACATCGA
CTCGCGATGAGATCGTCAATCGCATCGGCAAGAAAGCTTGGATCCACGTG
GCAGAGTTGTCGAATCGGGAATCGATCAAGGGTGTCATTCCAGCTCTGAC
CAGTCAAGGCCTCAAGCCAGAGATCCTACTCAACTGCGCCGGAATTCAAC
GGAGACACCCCAGTGAAAAGTTCCCGGACGAAGATTGGGATGAGGTTATC
CAAGTCAATCTGACGTCCGTATTTACGTTATGTCGAGAGTTCGGTGCATA
CTTGTTGGCGCGAGATGAGTCAGAGTTTCCAACAGGTCGTCGTGGAGCTA
TCATCAATGTCGCATCGCTCCTCACCTTCCAGGGAGGTATCACGGTACCT
GCATACGCAGCGTCAAAGGGAGGTGTCGCGCAACTGACGAAGGCCCTCTC
CAACGAATGGGTGGCCAAGGGTATCAACGTCAATGCAATTGCTCCTGGAT
ACATCGCCACAGATATGAACACTGACCTGATTAACGATTCCAACCGCAAT
GCTGGTATCATGGCTAGAATCCCGGCAGGCAGATGGGGCAAGCCAGAGGA
CTTCAAGGGCGTGATAGTGTTCTTGGCAAGCCAAGCGAGTAGCTATGTCT
CAGGCGAAATTATCACCGTTGATGGCGGTTGGATGGGACGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001958ATCC10864_001958Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001958-T1.exon1ATCC10864_001958-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001958-T1.exon2ATCC10864_001958-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001958-T1.exon3ATCC10864_001958-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001958-T1.cdsATCC10864_001958-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001958-T1ATCC10864_001958-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08659
PFAMPF01370
InterProIPR002347
PFAMPF00106
InterProIPR036291
InterProIPR020904
PFAMPF13561
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000043supercontigMCQH01000043:114303..115308 +
Powered by Drupal