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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:97104..98357+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002033-T1 ID=ATCC10864_002033-T1|Name=ATCC10864_002033-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1254bp|location=Sequence derived from alignment at MCQH01000048:97104..98357+ (Aspergillus niger ATCC 10864)
ATGCCAGACACACAGCGCATCACCGGACGCGCCCTTGTTTCCCACGGCCC
CTACCAGGCTGGTGGCTGGAAGCTTCAAAATGTCTCCCTGAGACCCTTGC
GAGAGAATGAGCTACTTATTGAAGTGGTTGCCTCAGGTGTCTGCCAGACC
GATCTCCATTTTGCTGGGTTGGAACGTGGTCATGGCGTACATTATCCCCG
GGTGATGGGACACGAAGGTAATTACTCCATTCCTGTGGTGCTGTCATGTC
TGTAAGAGAAGCTGATTATCTCATGAATCATCCATTCTTCGATAGGCGCC
GGATATGTTCGACAGGTCGGGCCCAGCGTCAGCGCAGCCCGAGTCGGCGA
CCCAGTCCTCCTGTCATTCTCGGCATGCCAGACCTGCCAATGCTGCAGTC
GGGGTCATCCCGCACACTGTCACAATTTCGATCCTATTAATTTCGAGTCA
AGCAAAGCCAACCGCGTTTTCTGGGGAACTGAAGCCGACGTATCAACACA
CTCTGCGGAGCCGGAAATCTTCGGCCAATTCTTCGGGCAATCGAGCTTTG
CTAGCTGGACAATAGTGCAGGAGGAATCAGTGGTGAATGTCTCCGGGCTG
GTGGAGGGAAGGGGGGACCTTCATCTGCTGGCGCCGCTGGGGTGTGGCGT
CCAGACAGGTGCAGGAGCGGTTATCAAGGCAGCCAAGGCACAGCCTGAGG
ATACTGTAGCTGTGCTCGGGCTGGGAGGCGTTGGATTGAGTGCGGTGATG
GGAGCGCGTATTGCCGGTTGCAGGAAAATCATCGGGATTGCACGAAATCA
GGCTCGTCTTGAGCTGGCACTGGCGCTTGGAGCGACACATGTCGTTAGAC
TCGATTCAAATACAGATAAAGGTCATGTAACAGAGTTGGTTCGTGCTCTT
ACTAATGGCCTTGGTGCAGATGTTACGCTGGAGACTACGGGGGTACCGGG
GTTGATTGCCGAGGGCATTCGCATGACAGCTAACAAGGGAAGGATTGTTC
AGCTTGGAACAGCTCCAGAAGATGCGGAGGTCAGTCTTCCAATTCATGAC
TTTATGGTTGCTGGGAAGCAATACATGGGAGTTGTGGAGGGAGACGTTGT
TCCTCGGGAGTTTGTGCCTAAAATGATTGAATGGGTGAAGACGGGACTAC
TACCTTTGCATGAGATTGTGGGCTTTTATCAAGCGGAAGATTACAGGACG
GCCATAAACGACATGAAAAGTGGGAAGACCATTAAACCTATACTGTTATG
GTGA back to topCoding sequence (CDS) from alignment at MCQH01000048:97104..98357+ >ATCC10864_002033-T1 ID=ATCC10864_002033-T1|Name=ATCC10864_002033-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2352bp|location=Sequence derived from alignment at MCQH01000048:97104..98357+ (Aspergillus niger ATCC 10864)
ATGCCAGACACACAGCGCATCACCGGACGCGCCCTTGTTTCCCACGGCCC
CTACCAGGCTGGTGGCTGGAAGCTTCAAAATGTCTCCCTGAGACCCTTGC
GAGAGAATGAGCTACTTATTGAAGTGGTTGCCTCAGGTGTCTGCCAGACC
GATCTCCATTTTGCTGGGTTGGAACGTGGTCATGGCGTACATTATCCCCG
GGTGATGGGACACGAAGGCGCCGGATATGTTCGACAGGTCGGGCCCAGCG
TCAGCGCAGCCCGAGTCGGCGACCCAGTCCTCCTGTCATTCTCGGCATGC
CAGACCTGCCAATGCTGCAGTCGGGGTCATCCCGCACACTGTCACAATTT
CGATCCTATTAATTTCGAGTCAAGCAAAGCCAACCGCGTTTTCTGGGGAA
CTGAAGCCGACGTATCAACACACTCTGCGGAGCCGGAAATCTTCGGCCAA
TTCTTCGGGCAATCGAGCTTTGCTAGCTGGACAATAGTGCAGGAGGAATC
AGTGGTGAATGTCTCCGGGCTGGTGGAGGGAAGGGGGGACCTTCATCTGC
TGGCGCCGCTGGGGTGTGGCGTCCAGACAGGTGCAGGAGCGGTTATCAAG
GCAGCCAAGGCACAGCCTGAGGATACTGTAGCTGTGCTCGGGCTGGGAGG
CGTTGGATTGAGTGCGGTGATGGGAGCGCGTATTGCCGGTTGCAGGAAAA
TCATCGGGATTGCACGAAATCAGGCTCGTCTTGAGCTGGCACTGGCGCTT
GGAGCGACACATGTCGTTAGACTCGATTCAAATACAGATAAAGGTCATGT
AACAGAGTTGGTTCGTGCTCTTACTAATGGCCTTGGTGCAGATGTTACGC
TGGAGACTACGGGGGTACCGGGGTTGATTGCCGAGGGCATTCGCATGACA
GCTAACAAGGGAAGGATTGTTCAGCTTGGAACAGCTCCAGAAGATGCGGA
GGTCAGTCTTCCAATTCATGACTTTATGGTTGCTGGGAAGCAATACATGG
GAGTTGTGGAGGGAGACGTTGTTCCTCGGGAGTTTGTGCCTAAAATGATT
GAATGGGTGAAGACGGGACTACTACCTTTGCATGAGATTGTGGGCTTTTA
TCAAGCGGAAGATTACAGGACGGCCATAAACGACATGAAAAGTGGGAAGA
CCATTAAACCTATACTGTTATGGTGAATGCCAGACACACAGCGCATCACC
GGACGCGCCCTTGTTTCCCACGGCCCCTACCAGGCTGGTGGCTGGAAGCT
TCAAAATGTCTCCCTGAGACCCTTGCGAGAGAATGAGCTACTTATTGAAG
TGGTTGCCTCAGGTGTCTGCCAGACCGATCTCCATTTTGCTGGGTTGGAA
CGTGGTCATGGCGTACATTATCCCCGGGTGATGGGACACGAAGGCGCCGG
ATATGTTCGACAGGTCGGGCCCAGCGTCAGCGCAGCCCGAGTCGGCGACC
CAGTCCTCCTGTCATTCTCGGCATGCCAGACCTGCCAATGCTGCAGTCGG
GGTCATCCCGCACACTGTCACAATTTCGATCCTATTAATTTCGAGTCAAG
CAAAGCCAACCGCGTTTTCTGGGGAACTGAAGCCGACGTATCAACACACT
CTGCGGAGCCGGAAATCTTCGGCCAATTCTTCGGGCAATCGAGCTTTGCT
AGCTGGACAATAGTGCAGGAGGAATCAGTGGTGAATGTCTCCGGGCTGGT
GGAGGGAAGGGGGGACCTTCATCTGCTGGCGCCGCTGGGGTGTGGCGTCC
AGACAGGTGCAGGAGCGGTTATCAAGGCAGCCAAGGCACAGCCTGAGGAT
ACTGTAGCTGTGCTCGGGCTGGGAGGCGTTGGATTGAGTGCGGTGATGGG
AGCGCGTATTGCCGGTTGCAGGAAAATCATCGGGATTGCACGAAATCAGG
CTCGTCTTGAGCTGGCACTGGCGCTTGGAGCGACACATGTCGTTAGACTC
GATTCAAATACAGATAAAGGTCATGTAACAGAGTTGGTTCGTGCTCTTAC
TAATGGCCTTGGTGCAGATGTTACGCTGGAGACTACGGGGGTACCGGGGT
TGATTGCCGAGGGCATTCGCATGACAGCTAACAAGGGAAGGATTGTTCAG
CTTGGAACAGCTCCAGAAGATGCGGAGGTCAGTCTTCCAATTCATGACTT
TATGGTTGCTGGGAAGCAATACATGGGAGTTGTGGAGGGAGACGTTGTTC
CTCGGGAGTTTGTGCCTAAAATGATTGAATGGGTGAAGACGGGACTACTA
CCTTTGCATGAGATTGTGGGCTTTTATCAAGCGGAAGATTACAGGACGGC
CATAAACGACATGAAAAGTGGGAAGACCATTAAACCTATACTGTTATGGT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00107 |
| InterPro | IPR002328 |
| PFAM | PF08240 |
| InterPro | IPR013149 |
| InterPro | IPR036291 |
| InterPro | IPR013154 |
| InterPro | IPR011032 |
| InterPro | IPR020843 |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1000048.1 |
| Note | SMCOG1040:alcohol dehydrogenase |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:97104..98357 + |
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