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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:249971..250635+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002091-T1 ID=ATCC10864_002091-T1|Name=ATCC10864_002091-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=665bp|location=Sequence derived from alignment at MCQH01000048:249971..250635+ (Aspergillus niger ATCC 10864)
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAGTAAGTTGCCGAAACGCCTCGCGGTCAACTTTTATCGTTCCA
CAAGGATATGTCGCCCAGGTTGAATAGGATGTGATGGCTTTCCAGTTTTC
ATTTGGACTTCCATCTGAGTTCAACTGGACTTGGAGGCCACCGGGTCTTT
TTGAATCTTATTAAGCTTGTGTCTATTATGGCATTTGTCGCAAAGTATTT
ACTAACGCTGTGTTTCTTCTCTGTCTAGAAAATCCAAGAAACCGTTGACA
CAATGCGCTCCAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGAT
TCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCG
CAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGA
TGCGCGTGTGCCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTATC
GTCCCTGCAGGTAAGATCAGCGCTATCCTCCAGCACTCCACCAAGCTGGA
CTCGGAAAAACATCCCGGAATGCGCTAACAGCTCTCTCCTTTCAGTTGTC
GCCACCAAACATTAA back to topCoding sequence (CDS) from alignment at MCQH01000048:249971..250635+ >ATCC10864_002091-T1 ID=ATCC10864_002091-T1|Name=ATCC10864_002091-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1080bp|location=Sequence derived from alignment at MCQH01000048:249971..250635+ (Aspergillus niger ATCC 10864)
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTT
AAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGA
CAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCCAACCGCGTGA
GGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTT
TGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGTTGTCGCCAC
CAAACATTAAATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCG
CCAATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGG
ACACGGGAAATCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTC
CAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGG
ACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCC
AACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTG
CCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAG
TTGTCGCCACCAAACATTAAATGTCCGAGCAGCCCTATGATCCCTACATC
CCCTCTGGCGCCAATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAAAATGG
CGACCCCAGGACACGGGAAATCGACAAAAAAATCCAAGAAACCGTTGACA
CAATGCGCTCCAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGAT
TCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCG
CAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGA
TGCGCGTGTGCCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTATC
GTCCCTGCAGTTGTCGCCACCAAACATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001388 |
| InterPro | IPR016444 |
| InterPro | IPR042855 |
| PFAM | PF00957 |
Properties
| Property Name | Value |
|---|
| Product | synaptobrevin |
| Product | SNAP receptor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:249971..250635 + |
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