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ATCC10864_002119-T1, ATCC10864_002119-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002119-T1
Unique NameATCC10864_002119-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:323998..325379-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002119-T1 ID=ATCC10864_002119-T1|Name=ATCC10864_002119-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1382bp|location=Sequence derived from alignment at MCQH01000048:323998..325379- (Aspergillus niger ATCC 10864)
ATGTTGGTCTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACT
CTTGACCCAGGACAACAGACTGGTGAGTTCAATTTCCATCCCCACACACT
TACAGCAAGCGATTGACGCACGAGCCTGCACGATATTGCCTCAAAATAAT
CCACTCTTCTTTCAGAGTAGCCCTGATACTCAACTAACCCGCCCCAGATC
GAATTTCCCTCCGTCCTTCTCCCCAGCAACATCACGTCCGGTAGTATCGT
CGACATCACCGTCGCGCGCAACCACACAGCCGAATCCGCCAGTGCCGCCA
ACTTCCAGTCGCTCCAAAAACGCATCCTCAATACCTACGGCATCAAGACC
CCCACACCCCCGGTTCTCCGTCTCCGCAACGCAACTCAAACTTCCCTCGT
CTTGGAATGGGAACCTATTGACCTAGCCACCGCATCCCTGAAATCACTCT
CCCTGTACCGCAATGGCTCTAAAGCCGGATCCATTCCCCGTCCGCTTGAG
ACGCGAAGCACCAAAATTAGCGGTCTAGCCATCCACACCGAATACACCTT
CCATCTCGTCCTGCGCACCACCGCCGGCACCTACCAGTCGGAGAAGCTGA
CTTGCCGCACGCACAAGATGACGGATCTCTCCGGTATCACGGTGACGGCG
GGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTGCAGCTGCGTTGGATCG
CATCGGTGGAAAGCTGATCGACTCGGTCCGCATTGATACCACCCACTTTG
TCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAAGGCGGTTGAGATGAAT
ATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTTGCGAGGCCGAAGGCAC
TATTGTCAGTGTTCGCGGGTATTACCTGAATGCTGACCCCAAGGCAAGAC
AGCTGGGCCCGATTCACAGCTCTACGCAGCATCAGCGAACGGTTTCTACT
GCCACCTCGAACCTGGCGCCCCCGGCTGCGCAGGCTCAGACCCCATCACG
GCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAGCCTCCGGTTACGCCGT
TCCCGGGAGCCGAGATGACCGGCCAGCCCATCGCGGAAGAGAAGGAGGTG
GGATCGGACGAGAGTACAGAGTCGCCGCCACCTCCACCTCCGAAGGATGA
AGAAAAGGAGGATGAAACTGCCGAGCAGAATGGTGATCACGAGACACCGC
CATCTCCGCCGGAGAAGAACGAGGACGAGGGCGAAGGCAAGGACGAGGAA
GAGAAGACCGAAGAGAACACGCGAGAGCAAGAAGAGGAAGAGGAAGAGGA
AGAGAAAGGCGACTCATCAAATACCAAAGAGCGCAAATCAAAGGAGGGTG
GAGAAGGGGACTTTAATGAAGTCCCTCTGTAA
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Coding sequence (CDS) from alignment at MCQH01000048:323998..325379-

>ATCC10864_002119-T1 ID=ATCC10864_002119-T1|Name=ATCC10864_002119-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2514bp|location=Sequence derived from alignment at MCQH01000048:323998..325379- (Aspergillus niger ATCC 10864)
ATCGAATTTCCCTCCGTCCTTCTCCCCAGCAACATCACGTCCGGTAGTAT
CGTCGACATCACCGTCGCGCGCAACCACACAGCCGAATCCGCCAGTGCCG
CCAACTTCCAGTCGCTCCAAAAACGCATCCTCAATACCTACGGCATCAAG
ACCCCCACACCCCCGGTTCTCCGTCTCCGCAACGCAACTCAAACTTCCCT
CGTCTTGGAATGGGAACCTATTGACCTAGCCACCGCATCCCTGAAATCAC
TCTCCCTGTACCGCAATGGCTCTAAAGCCGGATCCATTCCCCGTCCGCTT
GAGACGCGAAGCACCAAAATTAGCGGTCTAGCCATCCACACCGAATACAC
CTTCCATCTCGTCCTGCGCACCACCGCCGGCACCTACCAGTCGGAGAAGC
TGACTTGCCGCACGCACAAGATGACGGATCTCTCCGGTATCACGGTGACG
GCGGGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTGCAGCTGCGTTGGA
TCGCATCGGTGGAAAGCTGATCGACTCGGTCCGCATTGATACCACCCACT
TTGTCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAAGGCGGTTGAGATG
AATATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTTGCGAGGCCGAAGG
CACTATTGTCAGTGTTCGCGGGTATTACCTGAATGCTGACCCCAAGGCAA
GACAGCTGGGCCCGATTCACAGCTCTACGCAGCATCAGCGAACGGTTTCT
ACTGCCACCTCGAACCTGGCGCCCCCGGCTGCGCAGGCTCAGACCCCATC
ACGGCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAGCCTCCGGTTACGC
CGTTCCCGGGAGCCGAGATGACCGGCCAGCCCATCGCGGAAGAGAAGGAG
GTGGGATCGGACGAGAGTACAGAGTCGCCGCCACCTCCACCTCCGAAGGA
TGAAGAAAAGGAGGATGAAACTGCCGAGCAGAATGGTGATCACGAGACAC
CGCCATCTCCGCCGGAGAAGAACGAGGACGAGGGCGAAGGCAAGGACGAG
GAAGAGAAGACCGAAGAGAACACGCGAGAGCAAGAAGAGGAAGAGGAAGA
GGAAGAGAAAGGCGACTCATCAAATACCAAAGAGCGCAAATCAAAGGAGG
GTGGAGAAGGGGACTTTAATGAAGTCCCTCTGTAAATGTTGGTCTCCTTG
ACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACTCTTGACCCAGGACAA
CAGACTGATCGAATTTCCCTCCGTCCTTCTCCCCAGCAACATCACGTCCG
GTAGTATCGTCGACATCACCGTCGCGCGCAACCACACAGCCGAATCCGCC
AGTGCCGCCAACTTCCAGTCGCTCCAAAAACGCATCCTCAATACCTACGG
CATCAAGACCCCCACACCCCCGGTTCTCCGTCTCCGCAACGCAACTCAAA
CTTCCCTCGTCTTGGAATGGGAACCTATTGACCTAGCCACCGCATCCCTG
AAATCACTCTCCCTGTACCGCAATGGCTCTAAAGCCGGATCCATTCCCCG
TCCGCTTGAGACGCGAAGCACCAAAATTAGCGGTCTAGCCATCCACACCG
AATACACCTTCCATCTCGTCCTGCGCACCACCGCCGGCACCTACCAGTCG
GAGAAGCTGACTTGCCGCACGCACAAGATGACGGATCTCTCCGGTATCAC
GGTGACGGCGGGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTGCAGCTG
CGTTGGATCGCATCGGTGGAAAGCTGATCGACTCGGTCCGCATTGATACC
ACCCACTTTGTCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAAGGCGGT
TGAGATGAATATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTTGCGAGG
CCGAAGGCACTATTGTCAGTGTTCGCGGGTATTACCTGAATGCTGACCCC
AAGGCAAGACAGCTGGGCCCGATTCACAGCTCTACGCAGCATCAGCGAAC
GGTTTCTACTGCCACCTCGAACCTGGCGCCCCCGGCTGCGCAGGCTCAGA
CCCCATCACGGCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAGCCTCCG
GTTACGCCGTTCCCGGGAGCCGAGATGACCGGCCAGCCCATCGCGGAAGA
GAAGGAGGTGGGATCGGACGAGAGTACAGAGTCGCCGCCACCTCCACCTC
CGAAGGATGAAGAAAAGGAGGATGAAACTGCCGAGCAGAATGGTGATCAC
GAGACACCGCCATCTCCGCCGGAGAAGAACGAGGACGAGGGCGAAGGCAA
GGACGAGGAAGAGAAGACCGAAGAGAACACGCGAGAGCAAGAAGAGGAAG
AGGAAGAGGAAGAGAAAGGCGACTCATCAAATACCAAAGAGCGCAAATCA
AAGGAGGGTGGAGAAGGGGACTTTAATGAAGTCCCTCTGTAAATGTTGGT
CTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACTCTTGACCC
AGGACAACAGACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002119ATCC10864_002119Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002119-T1ATCC10864_002119-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002119-T1.cdsATCC10864_002119-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002119-T1.exon2ATCC10864_002119-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002119-T1.exon1ATCC10864_002119-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF16893
PFAMPF16892
InterProIPR031673
InterProIPR001357
PFAMPF12738
PFAMPF00533
InterProIPR003961
InterProIPR031669
InterProIPR013783
InterProIPR036116
InterProIPR036420
Properties
Property NameValue
NoteBUSCO:EOG092612CC
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:323998..325379 -
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