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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:327040..327737+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002121-T1 ID=ATCC10864_002121-T1|Name=ATCC10864_002121-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=698bp|location=Sequence derived from alignment at MCQH01000048:327040..327737+ (Aspergillus niger ATCC 10864)
ATGCCCAAGAACAAGGGAAAGGTGAGTTTGTGCTGCATCCCACCCGGGTA
CCCCGCCTTACAGATTTTCGCTTTGTTTTACGCTTGACTCTGGAGCGCAC
CTCATGCCACCATATCCCACCTCAACGACACACTTCAGCCCAGAAGATGT
GGGATAAGGCGGCATAGAGGCTGTTATACCAATAGAGCATTGCAGAACGA
AGCGAACCTGCGCCACAAGTCTGTACGCATGTCTAGGACAGTTTTGCTGA
CGTATCTGCATTCAAACAGGGCGGTAAGAACCGTCGTCGTGGAAAGAACG
AGAACGACAACGAGAAGCGTGAGCTTGTCTTCAAGGAAGAAGGCCAGGAG
TATGCGCAGGTCGTGAAGATGCTTGGTAACGGCCGTCTGGAGGCACTTTG
CTTCGATGGCGAGAAGCGTCTGGCTCACATCCGTGGCAAGCTCCGCAAGA
AGGTCTGGATCAACCAGGGCGACATCATCCTTCTCTCGCTGCGTGACTAC
CAAGACGAAAAGGGCGACGTCATCATGAAGTACACCGCCGATGAGGCCAG
AAGTCTCAAGGCCTACGGCGAGTTGCCCGAGCACGCCAAGATCAACGAGA
CCGACACCTACGGCCACGAGGGCTTCGAGGACAACGTCGAGTTCGACGAG
GACCGCGAGAGCGAAGACGAGAAGGAGATCGATGTCGACGAGCTCTAA back to topCoding sequence (CDS) from alignment at MCQH01000048:327040..327737+ >ATCC10864_002121-T1 ID=ATCC10864_002121-T1|Name=ATCC10864_002121-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=900bp|location=Sequence derived from alignment at MCQH01000048:327040..327737+ (Aspergillus niger ATCC 10864)
ATGCCCAAGAACAAGGGAAAGGGCGGTAAGAACCGTCGTCGTGGAAAGAA
CGAGAACGACAACGAGAAGCGTGAGCTTGTCTTCAAGGAAGAAGGCCAGG
AGTATGCGCAGGTCGTGAAGATGCTTGGTAACGGCCGTCTGGAGGCACTT
TGCTTCGATGGCGAGAAGCGTCTGGCTCACATCCGTGGCAAGCTCCGCAA
GAAGGTCTGGATCAACCAGGGCGACATCATCCTTCTCTCGCTGCGTGACT
ACCAAGACGAAAAGGGCGACGTCATCATGAAGTACACCGCCGATGAGGCC
AGAAGTCTCAAGGCCTACGGCGAGTTGCCCGAGCACGCCAAGATCAACGA
GACCGACACCTACGGCCACGAGGGCTTCGAGGACAACGTCGAGTTCGACG
AGGACCGCGAGAGCGAAGACGAGAAGGAGATCGATGTCGACGAGCTCTAA
ATGCCCAAGAACAAGGGAAAGGGCGGTAAGAACCGTCGTCGTGGAAAGAA
CGAGAACGACAACGAGAAGCGTGAGCTTGTCTTCAAGGAAGAAGGCCAGG
AGTATGCGCAGGTCGTGAAGATGCTTGGTAACGGCCGTCTGGAGGCACTT
TGCTTCGATGGCGAGAAGCGTCTGGCTCACATCCGTGGCAAGCTCCGCAA
GAAGGTCTGGATCAACCAGGGCGACATCATCCTTCTCTCGCTGCGTGACT
ACCAAGACGAAAAGGGCGACGTCATCATGAAGTACACCGCCGATGAGGCC
AGAAGTCTCAAGGCCTACGGCGAGTTGCCCGAGCACGCCAAGATCAACGA
GACCGACACCTACGGCCACGAGGGCTTCGAGGACAACGTCGAGTTCGACG
AGGACCGCGAGAGCGAAGACGAGAAGGAGATCGATGTCGACGAGCTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
| GO:0003723 | RNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001253 |
| InterPro | IPR018104 |
| PFAM | PF01176 |
| InterPro | IPR012340 |
| InterPro | IPR006196 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092652Y6 |
| Product | Y-chromosomal |
| Product | Eukaryotic translation initiation factor 1A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:327040..327737 + |
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