You are here

Home

ATCC10864_002138-T1, ATCC10864_002138-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002138-T1
Unique NameATCC10864_002138-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:387929..388980+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002138-T1 ID=ATCC10864_002138-T1|Name=ATCC10864_002138-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1052bp|location=Sequence derived from alignment at MCQH01000048:387929..388980+ (Aspergillus niger ATCC 10864)
ATGGATCTCGCCAGCCTCATCTCCCACCCGGGACCCGATCCCATCATGAA
GTCTAGAGCCTCATACAGCCCTCCCATGACTTCCTACAAGCGCTCCATCG
AACACACCTCGGACTCCTACTTCCCCTCCGTCCCGATCTCCTACACCCGC
TCCCCGCAGCCTCCTCTCTCCCCGCCTGTCGAGGACCAGTCCCCCAAGTG
CTCTCTTCCCTCCATCTCTACCTTGCTCGAGGGCGCAGATGGCGCAGCTA
TGCATGCAGCAAGTATGGCCCCCAATGCTTAGGGAAATTGTCCGGAGAAG
ACCGAAGGAGTCAATGCTGACAAGAGATTCCTGCAGAGCGCACTAGAATG
ACCCCTCCTCTGCAACGCGACCTTGATTCCCGCCAACAGTCGCAAGCATA
TGACCTCAAAGCTAACGGCCCCCAAATCGCCTTGCCCCCCACCCCCCCAT
TGCGCCCCGGTTCTAGCTTCCACAGCGCCGGACACTCCCCCGCCTCCTCC
ATCTCTGCTGCCAGCGATGCTGCTGCGCCCAAGCGCTCCGACTCCTACCC
TCAAGTGCCCATGGCTCTGCCTAGCCCCTCGGATCGCTCGTCCATCTCCA
GCCAGGGTTCAGTTCAGGGTGTCTCCAGTGCTTCCTACGCTTCTCCCGCT
CCCAGCGTCTCTTCCTACTCCTCTCCCATTGAGCCTTCGGCCTCGTCCGC
CATGTTCTACCAACGCACGGCTCCCTCCACTTCCGCCGCTCCTCTCCCGA
CGCCAGCAGCACCGCAACAGATTATCTCCCCTGTGAACCCTGCCTGGCAG
CACCACCACTACTTCCCTCCCTCCAGCACCACGCCCTACCAGCAGAACCA
TGATCGCTATATCTGCCGCACCTGCCACAAGGCCTTCTCGAGACCCTCCA
GCCTGCGCATCCACTCCCACAGCCACACGGGCGAGAAGCCCTTCCGCTGC
ACCCACGCCGGTTGTGGGAAGGCCTTCAGCGTGCGCAGCAACATGAAGCG
TCATGAGCGTGGCTGCCACAGTGGTCGGCCCGTCGCAACCGCCATGGTTT
AA
back to top

Coding sequence (CDS) from alignment at MCQH01000048:387929..388980+

>ATCC10864_002138-T1 ID=ATCC10864_002138-T1|Name=ATCC10864_002138-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1956bp|location=Sequence derived from alignment at MCQH01000048:387929..388980+ (Aspergillus niger ATCC 10864)
ATGGATCTCGCCAGCCTCATCTCCCACCCGGGACCCGATCCCATCATGAA
GTCTAGAGCCTCATACAGCCCTCCCATGACTTCCTACAAGCGCTCCATCG
AACACACCTCGGACTCCTACTTCCCCTCCGTCCCGATCTCCTACACCCGC
TCCCCGCAGCCTCCTCTCTCCCCGCCTGTCGAGGACCAGTCCCCCAAGTG
CTCTCTTCCCTCCATCTCTACCTTGCTCGAGGGCGCAGATGGCGCAGCTA
TGCATGCAGCAAAGCGCACTAGAATGACCCCTCCTCTGCAACGCGACCTT
GATTCCCGCCAACAGTCGCAAGCATATGACCTCAAAGCTAACGGCCCCCA
AATCGCCTTGCCCCCCACCCCCCCATTGCGCCCCGGTTCTAGCTTCCACA
GCGCCGGACACTCCCCCGCCTCCTCCATCTCTGCTGCCAGCGATGCTGCT
GCGCCCAAGCGCTCCGACTCCTACCCTCAAGTGCCCATGGCTCTGCCTAG
CCCCTCGGATCGCTCGTCCATCTCCAGCCAGGGTTCAGTTCAGGGTGTCT
CCAGTGCTTCCTACGCTTCTCCCGCTCCCAGCGTCTCTTCCTACTCCTCT
CCCATTGAGCCTTCGGCCTCGTCCGCCATGTTCTACCAACGCACGGCTCC
CTCCACTTCCGCCGCTCCTCTCCCGACGCCAGCAGCACCGCAACAGATTA
TCTCCCCTGTGAACCCTGCCTGGCAGCACCACCACTACTTCCCTCCCTCC
AGCACCACGCCCTACCAGCAGAACCATGATCGCTATATCTGCCGCACCTG
CCACAAGGCCTTCTCGAGACCCTCCAGCCTGCGCATCCACTCCCACAGCC
ACACGGGCGAGAAGCCCTTCCGCTGCACCCACGCCGGTTGTGGGAAGGCC
TTCAGCGTGCGCAGCAACATGAAGCGTCATGAGCGTGGCTGCCACAGTGG
TCGGCCCGTCGCAACCGCCATGGTTTAAATGGATCTCGCCAGCCTCATCT
CCCACCCGGGACCCGATCCCATCATGAAGTCTAGAGCCTCATACAGCCCT
CCCATGACTTCCTACAAGCGCTCCATCGAACACACCTCGGACTCCTACTT
CCCCTCCGTCCCGATCTCCTACACCCGCTCCCCGCAGCCTCCTCTCTCCC
CGCCTGTCGAGGACCAGTCCCCCAAGTGCTCTCTTCCCTCCATCTCTACC
TTGCTCGAGGGCGCAGATGGCGCAGCTATGCATGCAGCAAAGCGCACTAG
AATGACCCCTCCTCTGCAACGCGACCTTGATTCCCGCCAACAGTCGCAAG
CATATGACCTCAAAGCTAACGGCCCCCAAATCGCCTTGCCCCCCACCCCC
CCATTGCGCCCCGGTTCTAGCTTCCACAGCGCCGGACACTCCCCCGCCTC
CTCCATCTCTGCTGCCAGCGATGCTGCTGCGCCCAAGCGCTCCGACTCCT
ACCCTCAAGTGCCCATGGCTCTGCCTAGCCCCTCGGATCGCTCGTCCATC
TCCAGCCAGGGTTCAGTTCAGGGTGTCTCCAGTGCTTCCTACGCTTCTCC
CGCTCCCAGCGTCTCTTCCTACTCCTCTCCCATTGAGCCTTCGGCCTCGT
CCGCCATGTTCTACCAACGCACGGCTCCCTCCACTTCCGCCGCTCCTCTC
CCGACGCCAGCAGCACCGCAACAGATTATCTCCCCTGTGAACCCTGCCTG
GCAGCACCACCACTACTTCCCTCCCTCCAGCACCACGCCCTACCAGCAGA
ACCATGATCGCTATATCTGCCGCACCTGCCACAAGGCCTTCTCGAGACCC
TCCAGCCTGCGCATCCACTCCCACAGCCACACGGGCGAGAAGCCCTTCCG
CTGCACCCACGCCGGTTGTGGGAAGGCCTTCAGCGTGCGCAGCAACATGA
AGCGTCATGAGCGTGGCTGCCACAGTGGTCGGCCCGTCGCAACCGCCATG
GTTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002138ATCC10864_002138Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002138-T1.exon1ATCC10864_002138-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002138-T1.exon2ATCC10864_002138-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002138-T1.cdsATCC10864_002138-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002138-T1ATCC10864_002138-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036236
InterProIPR013087
PFAMPF00096
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:387929..388980 +
Powered by Drupal