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ATCC10864_002143-T1, ATCC10864_002143-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002143-T1
Unique NameATCC10864_002143-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:402354..404027-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002143-T1 ID=ATCC10864_002143-T1|Name=ATCC10864_002143-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1674bp|location=Sequence derived from alignment at MCQH01000048:402354..404027- (Aspergillus niger ATCC 10864)
ATGGCTCGTCTTTTGAAGGCCGTTACTGTTTGTGCGTTGGCGGGCATCGC
TCATGCCTTCAACTATGACCAGCCTTACCGTGGTCAATACCATTTTTCAC
CCCAGAAGAACTGGATGAATGATCCCAATGGGCTTTTGTATCATAATGGA
ACCTACCATCTATTCTTCCAGTACAATCCTGGTGGTATCGAGTGGGGCAA
CATATCATGGGGGCATGCTACCAGTGAGGACCTTACTCACTGGGAGGAGC
AGCCCGTTGCCCTTCTGGCCCGAGGATACGGCAGCGATGTCACCGAGATG
TACTTCAGCGGAAGTGCTGTTGCCGATGTCAATAACACGAGTGGCTTCGG
AAAGGACGGCAAGACACCTCTAGTTGCCATGTATACTTCCTATGTACTTG
CCCCATCACCGAACCATCTCCTGGAGTGCATATCGCTAACAGTAATTCCA
TAGTACCCCGTTGCACAGACATTGCCGAGTGGCCAAACCGTCCAAGAGGA
CCAGCAATCTCAATCCATCGCCTACAGTCTTGATGACGGTCTAACATGGA
CGACATACGATGCCGCCAACCCAGTCATCCCCAACCCTCCCCAGCCCTAC
CAAGCTCAATACCAGAACTTCCGAGACCCCTTTGTGTTCTGGCACGACGA
GTCCCAGAAATGGGTTGTCGTTACAAGTATAGCCGAACTGCACAAGCTTG
CAATTTATACATCTGACAACCTCAAAGACTGGAAGCTAGTGAGCGAATTC
GGTCCTTACAATGCGCAAGGCGGCGTATGGGAGTGCCCCGGACTTTTCAA
GCTACCCCTTGACGGGGGAAGCTCCACAAAATGGGTTATCACGAGCGGAC
TGAACCCCGGTGGTCCTCCAGGCACCGTCGGCTCTGGAACCCAGTACTTT
GTGGGCGAGTTCGACGGAACCACATTTACGCCTGACGCCGATACGGTATA
CCCGGGTAACTCAACCGCCAACTGGATGGACTGGGGCCCGGACTTCTATG
CCGCGGCTGGCTACAACGGCCTCTCAATTAAAGACCACGTCCATATCGGC
TGGATGAACAACTGGCAGTATGGTGCGAACATCCCCACCTACCCCTGGCG
CAGCGCCATGGCCATTCCTCGCCACCTGGCTCTGAAGACCATCAACAACA
AAACAACGCTAGTCCAGCAGCCCCAGGAAGCGTGGTCTTCCATCTCGAGC
AAGCATCCGCTCTATTCGCGCACCTACAGTACCTTCTCTGAAGGTTCCAC
CAACGCAAGCACGACTGGAGAAACGTTCAGGGTAGATCTGAGCTTCTCTG
CTACGTCGAAGGCCTCAACATTTGCAATCGCCCTCCGAGCCTCCGCCAAC
TTCACCGAGCAGACCCTTGCTGGCTACGACTTCGCCAAGCAGCAAATCTT
CCTCGACCGGACCAAGTCAGGGGATGTGTCATTTGATAACACCTTCGCGA
GCGTCTATCATGGACCCTTGGTGCCGGATAGCACTAGCATGGTGAGGTTG
AGTATCTTCGTCGACAGGTCCAGCGTCGAGGTATTCGGAGGCCAAGGTGA
GACGTCTTTGACGGCTCAGATCTTTCCTAGCAATGATGCGGTTCACGCCC
GCCTGGTGTCTACTGGTGGAGCTACTGAGGACGTCCGCGTTGATGTTCAC
AATATTACTTCGACGTGGAATTAA
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Coding sequence (CDS) from alignment at MCQH01000048:402354..404027-

>ATCC10864_002143-T1 ID=ATCC10864_002143-T1|Name=ATCC10864_002143-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3228bp|location=Sequence derived from alignment at MCQH01000048:402354..404027- (Aspergillus niger ATCC 10864)
TACCCCGTTGCACAGACATTGCCGAGTGGCCAAACCGTCCAAGAGGACCA
GCAATCTCAATCCATCGCCTACAGTCTTGATGACGGTCTAACATGGACGA
CATACGATGCCGCCAACCCAGTCATCCCCAACCCTCCCCAGCCCTACCAA
GCTCAATACCAGAACTTCCGAGACCCCTTTGTGTTCTGGCACGACGAGTC
CCAGAAATGGGTTGTCGTTACAAGTATAGCCGAACTGCACAAGCTTGCAA
TTTATACATCTGACAACCTCAAAGACTGGAAGCTAGTGAGCGAATTCGGT
CCTTACAATGCGCAAGGCGGCGTATGGGAGTGCCCCGGACTTTTCAAGCT
ACCCCTTGACGGGGGAAGCTCCACAAAATGGGTTATCACGAGCGGACTGA
ACCCCGGTGGTCCTCCAGGCACCGTCGGCTCTGGAACCCAGTACTTTGTG
GGCGAGTTCGACGGAACCACATTTACGCCTGACGCCGATACGGTATACCC
GGGTAACTCAACCGCCAACTGGATGGACTGGGGCCCGGACTTCTATGCCG
CGGCTGGCTACAACGGCCTCTCAATTAAAGACCACGTCCATATCGGCTGG
ATGAACAACTGGCAGTATGGTGCGAACATCCCCACCTACCCCTGGCGCAG
CGCCATGGCCATTCCTCGCCACCTGGCTCTGAAGACCATCAACAACAAAA
CAACGCTAGTCCAGCAGCCCCAGGAAGCGTGGTCTTCCATCTCGAGCAAG
CATCCGCTCTATTCGCGCACCTACAGTACCTTCTCTGAAGGTTCCACCAA
CGCAAGCACGACTGGAGAAACGTTCAGGGTAGATCTGAGCTTCTCTGCTA
CGTCGAAGGCCTCAACATTTGCAATCGCCCTCCGAGCCTCCGCCAACTTC
ACCGAGCAGACCCTTGCTGGCTACGACTTCGCCAAGCAGCAAATCTTCCT
CGACCGGACCAAGTCAGGGGATGTGTCATTTGATAACACCTTCGCGAGCG
TCTATCATGGACCCTTGGTGCCGGATAGCACTAGCATGGTGAGGTTGAGT
ATCTTCGTCGACAGGTCCAGCGTCGAGGTATTCGGAGGCCAAGGTGAGAC
GTCTTTGACGGCTCAGATCTTTCCTAGCAATGATGCGGTTCACGCCCGCC
TGGTGTCTACTGGTGGAGCTACTGAGGACGTCCGCGTTGATGTTCACAAT
ATTACTTCGACGTGGAATTAAATGGCTCGTCTTTTGAAGGCCGTTACTGT
TTGTGCGTTGGCGGGCATCGCTCATGCCTTCAACTATGACCAGCCTTACC
GTGGTCAATACCATTTTTCACCCCAGAAGAACTGGATGAATGATCCCAAT
GGGCTTTTGTATCATAATGGAACCTACCATCTATTCTTCCAGTACAATCC
TGGTGGTATCGAGTGGGGCAACATATCATGGGGGCATGCTACCAGTGAGG
ACCTTACTCACTGGGAGGAGCAGCCCGTTGCCCTTCTGGCCCGAGGATAC
GGCAGCGATGTCACCGAGATGTACTTCAGCGGAAGTGCTGTTGCCGATGT
CAATAACACGAGTGGCTTCGGAAAGGACGGCAAGACACCTCTAGTTGCCA
TGTATACTTCCTATTACCCCGTTGCACAGACATTGCCGAGTGGCCAAACC
GTCCAAGAGGACCAGCAATCTCAATCCATCGCCTACAGTCTTGATGACGG
TCTAACATGGACGACATACGATGCCGCCAACCCAGTCATCCCCAACCCTC
CCCAGCCCTACCAAGCTCAATACCAGAACTTCCGAGACCCCTTTGTGTTC
TGGCACGACGAGTCCCAGAAATGGGTTGTCGTTACAAGTATAGCCGAACT
GCACAAGCTTGCAATTTATACATCTGACAACCTCAAAGACTGGAAGCTAG
TGAGCGAATTCGGTCCTTACAATGCGCAAGGCGGCGTATGGGAGTGCCCC
GGACTTTTCAAGCTACCCCTTGACGGGGGAAGCTCCACAAAATGGGTTAT
CACGAGCGGACTGAACCCCGGTGGTCCTCCAGGCACCGTCGGCTCTGGAA
CCCAGTACTTTGTGGGCGAGTTCGACGGAACCACATTTACGCCTGACGCC
GATACGGTATACCCGGGTAACTCAACCGCCAACTGGATGGACTGGGGCCC
GGACTTCTATGCCGCGGCTGGCTACAACGGCCTCTCAATTAAAGACCACG
TCCATATCGGCTGGATGAACAACTGGCAGTATGGTGCGAACATCCCCACC
TACCCCTGGCGCAGCGCCATGGCCATTCCTCGCCACCTGGCTCTGAAGAC
CATCAACAACAAAACAACGCTAGTCCAGCAGCCCCAGGAAGCGTGGTCTT
CCATCTCGAGCAAGCATCCGCTCTATTCGCGCACCTACAGTACCTTCTCT
GAAGGTTCCACCAACGCAAGCACGACTGGAGAAACGTTCAGGGTAGATCT
GAGCTTCTCTGCTACGTCGAAGGCCTCAACATTTGCAATCGCCCTCCGAG
CCTCCGCCAACTTCACCGAGCAGACCCTTGCTGGCTACGACTTCGCCAAG
CAGCAAATCTTCCTCGACCGGACCAAGTCAGGGGATGTGTCATTTGATAA
CACCTTCGCGAGCGTCTATCATGGACCCTTGGTGCCGGATAGCACTAGCA
TGGTGAGGTTGAGTATCTTCGTCGACAGGTCCAGCGTCGAGGTATTCGGA
GGCCAAGGTGAGACGTCTTTGACGGCTCAGATCTTTCCTAGCAATGATGC
GGTTCACGCCCGCCTGGTGTCTACTGGTGGAGCTACTGAGGACGTCCGCG
TTGATGTTCACAATATTACTTCGACGTGGAATTAAATGGCTCGTCTTTTG
AAGGCCGTTACTGTTTGTGCGTTGGCGGGCATCGCTCATGCCTTCAACTA
TGACCAGCCTTACCGTGGTCAATACCATTTTTCACCCCAGAAGAACTGGA
TGAATGATCCCAATGGGCTTTTGTATCATAATGGAACCTACCATCTATTC
TTCCAGTACAATCCTGGTGGTATCGAGTGGGGCAACATATCATGGGGGCA
TGCTACCAGTGAGGACCTTACTCACTGGGAGGAGCAGCCCGTTGCCCTTC
TGGCCCGAGGATACGGCAGCGATGTCACCGAGATGTACTTCAGCGGAAGT
GCTGTTGCCGATGTCAATAACACGAGTGGCTTCGGAAAGGACGGCAAGAC
ACCTCTAGTTGCCATGTATACTTCCTAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002143ATCC10864_002143Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002143-T1ATCC10864_002143-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002143-T1.cdsATCC10864_002143-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002143-T1.exon2ATCC10864_002143-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002143-T1.exon1ATCC10864_002143-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00251
InterProIPR013189
InterProIPR023296
InterProIPR018053
InterProIPR013320
PFAMPF08244
InterProIPR001362
InterProIPR013148
Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH32
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:402354..404027 -
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