You are here

Home

ATCC10864_002149-T1, ATCC10864_002149-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002149-T1
Unique NameATCC10864_002149-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:419419..421280-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002149-T1 ID=ATCC10864_002149-T1|Name=ATCC10864_002149-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1862bp|location=Sequence derived from alignment at MCQH01000048:419419..421280- (Aspergillus niger ATCC 10864)
ATGGCTTCTATACCTGGTAAGTATCTTTAGGGCCGTATGCTCCATTCCAC
TCTATCTTGTTTCTTCTCCGCTGATCCCATGACGCAGTTGTTGTAAAGCA
CCAGGGCAAACGCTACGAGGTGGAGCTCGATCCTTCCCTGAATGGCGAAA
CGCTCAAATACCAGCTATTTTCTCTCACTGGCGTCGAACCCGAGCGGCAG
AAGATCCTAGTCAAGGGAGGCCAGCTTAAAGATGATACACCTCTGTCCTC
CCTCAACGCCAAACCCGGCCAAACGTTCATGATGATGGGCACTCCGTCGG
GCGGTCAAGGTGCTGGAGACTTGGGTAGACCAAAGGAAGTCGTCAAGTTT
TTGGAAGACATGACGGAAGCTGAAGCTGCCAGGGCGGAGGGTGCAACTCC
TGCAGGTCTGCAGAACCTTGGAAATACTTGCTACCTGAACTCAACGCTAC
AGACACTACGGAGCGTTCCCGAACTCCAGGATGCGCTGCTCAAATACCGA
CCTTCTGGGGGCTCTTCTGGAGGTTCTAGCCTTTCGAACCTCAGTAGTCT
CGGTCTTGGCGGCTTGGGAGCTTCTATGGATCTCACGTCCTCTCTGCGGG
ACCTCTTCAAGCAAATGTCGGAGACGCAGGAAGGTTTCCCGCCGCTTATG
TTTCTCAACGCGCTTCGAAATGCTTTCCCCCAATTTGCTCAAAGGGATCG
CAATGGACATGGCTATGCTCAACAGGATGCCGAAGAGGCCTGGTCACAGA
TCGTGAGTCAGCTGCGTAACAAGCTGGTCGTGAAGGAGGGTGAAGGTGAC
TCTGCCGCCGAAGTTTCCTTCGTGGATAAGTACATGGCCGGAGGGTTTGA
GTCCACCACCGAATGCGACGAAAAGGCCGCAAAGGAGGCTGGTGAAGAAC
CTACTAATAGCTCCGATGTGTTTTACAAGCTTGATTGTCATATTGGTAAA
GAGACTAACCATTTGCACGACGGTATTATGGCTGGTCTCGAGGAGAAGAT
CGAAAAGCGGTCCTCTACTCTTGACCGCGATGCCGTATATACCAAACGTT
CACGCATTGCGCGCTTGCCCAAGTACTTGACGGTGCATTTCGTTCGGTTC
TTCTGGAAGCGCGAAACACAGAAGAAGGCCAAGATTATGCGAAAGGTCAC
ATTCCCCGCTGAGCTTGATGCGGTGGACTTCTGCACCGACGAATTGAAAA
AGCAGCTCATTCCTGTGAGAGACAAGGTCCGTGAGATTCGGAAGGAAGAG
GTGGATGTTGAACGTGCTCGTAAGCGTCAAAAGCTCGCTCACCGGAAAGA
GGAGGAAGAAAAGAAAGAGGCCGAGTCCGGGGCAAGCATGGAGCCGATGC
AGAAGAAGAAAGCTGCTGAAGAGCGCAAGGGAGAGTCTAAAGCCGCGGAG
AAAGACGGAGATGAGGCCATGACCGATGTGTTCAAGTCCGATGCAGACTA
CGAAGCTGAGAAGACCGCCTCGATTCTCGCGGCTAAGAAAGAATTGTCTG
AGCTCATTGACCCCAGTCTTGCCTCAGACAGCGGTGTGAACAAGACGGGT
CTCTACGAACTACGCGGAGTGATCACACATCAGGGTGCAAGTGCAGACAG
CGGACATTACACCGCGTACGTGAAAAAGCAGTCCAGCAGTGATGGTGCAA
GCACCGAAGACAAGTGGTGGTGGTTCAACGATGAGAAGGTTACCGAAGTG
GAAGGGGACAAGATTGAGACGCTTGCTGGTGGTGGTAAGCCCCCTGGAAC
CATTGTTACTCGATTCTGATAATCAACGGACTTCTAACCTTCATTTCCAG
GTGAATCCCATTCTGCACTTATTCTCCTCTACCGGGCTGTTGAGGTGCCG
ACGACGAATTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000048:419419..421280-

>ATCC10864_002149-T1 ID=ATCC10864_002149-T1|Name=ATCC10864_002149-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5175bp|location=Sequence derived from alignment at MCQH01000048:419419..421280- (Aspergillus niger ATCC 10864)
GTGAATCCCATTCTGCACTTATTCTCCTCTACCGGGCTGTTGAGGTGCCG
ACGACGAATTAATTGTTGTAAAGCACCAGGGCAAACGCTACGAGGTGGAG
CTCGATCCTTCCCTGAATGGCGAAACGCTCAAATACCAGCTATTTTCTCT
CACTGGCGTCGAACCCGAGCGGCAGAAGATCCTAGTCAAGGGAGGCCAGC
TTAAAGATGATACACCTCTGTCCTCCCTCAACGCCAAACCCGGCCAAACG
TTCATGATGATGGGCACTCCGTCGGGCGGTCAAGGTGCTGGAGACTTGGG
TAGACCAAAGGAAGTCGTCAAGTTTTTGGAAGACATGACGGAAGCTGAAG
CTGCCAGGGCGGAGGGTGCAACTCCTGCAGGTCTGCAGAACCTTGGAAAT
ACTTGCTACCTGAACTCAACGCTACAGACACTACGGAGCGTTCCCGAACT
CCAGGATGCGCTGCTCAAATACCGACCTTCTGGGGGCTCTTCTGGAGGTT
CTAGCCTTTCGAACCTCAGTAGTCTCGGTCTTGGCGGCTTGGGAGCTTCT
ATGGATCTCACGTCCTCTCTGCGGGACCTCTTCAAGCAAATGTCGGAGAC
GCAGGAAGGTTTCCCGCCGCTTATGTTTCTCAACGCGCTTCGAAATGCTT
TCCCCCAATTTGCTCAAAGGGATCGCAATGGACATGGCTATGCTCAACAG
GATGCCGAAGAGGCCTGGTCACAGATCGTGAGTCAGCTGCGTAACAAGCT
GGTCGTGAAGGAGGGTGAAGGTGACTCTGCCGCCGAAGTTTCCTTCGTGG
ATAAGTACATGGCCGGAGGGTTTGAGTCCACCACCGAATGCGACGAAAAG
GCCGCAAAGGAGGCTGGTGAAGAACCTACTAATAGCTCCGATGTGTTTTA
CAAGCTTGATTGTCATATTGGTAAAGAGACTAACCATTTGCACGACGGTA
TTATGGCTGGTCTCGAGGAGAAGATCGAAAAGCGGTCCTCTACTCTTGAC
CGCGATGCCGTATATACCAAACGTTCACGCATTGCGCGCTTGCCCAAGTA
CTTGACGGTGCATTTCGTTCGGTTCTTCTGGAAGCGCGAAACACAGAAGA
AGGCCAAGATTATGCGAAAGGTCACATTCCCCGCTGAGCTTGATGCGGTG
GACTTCTGCACCGACGAATTGAAAAAGCAGCTCATTCCTGTGAGAGACAA
GGTCCGTGAGATTCGGAAGGAAGAGGTGGATGTTGAACGTGCTCGTAAGC
GTCAAAAGCTCGCTCACCGGAAAGAGGAGGAAGAAAAGAAAGAGGCCGAG
TCCGGGGCAAGCATGGAGCCGATGCAGAAGAAGAAAGCTGCTGAAGAGCG
CAAGGGAGAGTCTAAAGCCGCGGAGAAAGACGGAGATGAGGCCATGACCG
ATGTGTTCAAGTCCGATGCAGACTACGAAGCTGAGAAGACCGCCTCGATT
CTCGCGGCTAAGAAAGAATTGTCTGAGCTCATTGACCCCAGTCTTGCCTC
AGACAGCGGTGTGAACAAGACGGGTCTCTACGAACTACGCGGAGTGATCA
CACATCAGGGTGCAAGTGCAGACAGCGGACATTACACCGCGTACGTGAAA
AAGCAGTCCAGCAGTGATGGTGCAAGCACCGAAGACAAGTGGTGGTGGTT
CAACGATGAGAAGGTTACCGAAGTGGAAGGGGACAAGATTGAGACGCTTG
CTGGTGGTGATGGCTTCTATACCTGGTGAATCCCATTCTGCACTTATTCT
CCTCTACCGGGCTGTTGAGGTGCCGACGACGAATTAATTGTTGTAAAGCA
CCAGGGCAAACGCTACGAGGTGGAGCTCGATCCTTCCCTGAATGGCGAAA
CGCTCAAATACCAGCTATTTTCTCTCACTGGCGTCGAACCCGAGCGGCAG
AAGATCCTAGTCAAGGGAGGCCAGCTTAAAGATGATACACCTCTGTCCTC
CCTCAACGCCAAACCCGGCCAAACGTTCATGATGATGGGCACTCCGTCGG
GCGGTCAAGGTGCTGGAGACTTGGGTAGACCAAAGGAAGTCGTCAAGTTT
TTGGAAGACATGACGGAAGCTGAAGCTGCCAGGGCGGAGGGTGCAACTCC
TGCAGGTCTGCAGAACCTTGGAAATACTTGCTACCTGAACTCAACGCTAC
AGACACTACGGAGCGTTCCCGAACTCCAGGATGCGCTGCTCAAATACCGA
CCTTCTGGGGGCTCTTCTGGAGGTTCTAGCCTTTCGAACCTCAGTAGTCT
CGGTCTTGGCGGCTTGGGAGCTTCTATGGATCTCACGTCCTCTCTGCGGG
ACCTCTTCAAGCAAATGTCGGAGACGCAGGAAGGTTTCCCGCCGCTTATG
TTTCTCAACGCGCTTCGAAATGCTTTCCCCCAATTTGCTCAAAGGGATCG
CAATGGACATGGCTATGCTCAACAGGATGCCGAAGAGGCCTGGTCACAGA
TCGTGAGTCAGCTGCGTAACAAGCTGGTCGTGAAGGAGGGTGAAGGTGAC
TCTGCCGCCGAAGTTTCCTTCGTGGATAAGTACATGGCCGGAGGGTTTGA
GTCCACCACCGAATGCGACGAAAAGGCCGCAAAGGAGGCTGGTGAAGAAC
CTACTAATAGCTCCGATGTGTTTTACAAGCTTGATTGTCATATTGGTAAA
GAGACTAACCATTTGCACGACGGTATTATGGCTGGTCTCGAGGAGAAGAT
CGAAAAGCGGTCCTCTACTCTTGACCGCGATGCCGTATATACCAAACGTT
CACGCATTGCGCGCTTGCCCAAGTACTTGACGGTGCATTTCGTTCGGTTC
TTCTGGAAGCGCGAAACACAGAAGAAGGCCAAGATTATGCGAAAGGTCAC
ATTCCCCGCTGAGCTTGATGCGGTGGACTTCTGCACCGACGAATTGAAAA
AGCAGCTCATTCCTGTGAGAGACAAGGTCCGTGAGATTCGGAAGGAAGAG
GTGGATGTTGAACGTGCTCGTAAGCGTCAAAAGCTCGCTCACCGGAAAGA
GGAGGAAGAAAAGAAAGAGGCCGAGTCCGGGGCAAGCATGGAGCCGATGC
AGAAGAAGAAAGCTGCTGAAGAGCGCAAGGGAGAGTCTAAAGCCGCGGAG
AAAGACGGAGATGAGGCCATGACCGATGTGTTCAAGTCCGATGCAGACTA
CGAAGCTGAGAAGACCGCCTCGATTCTCGCGGCTAAGAAAGAATTGTCTG
AGCTCATTGACCCCAGTCTTGCCTCAGACAGCGGTGTGAACAAGACGGGT
CTCTACGAACTACGCGGAGTGATCACACATCAGGGTGCAAGTGCAGACAG
CGGACATTACACCGCGTACGTGAAAAAGCAGTCCAGCAGTGATGGTGCAA
GCACCGAAGACAAGTGGTGGTGGTTCAACGATGAGAAGGTTACCGAAGTG
GAAGGGGACAAGATTGAGACGCTTGCTGGTGGTGATGGCTTCTATACCTG
GTGAATCCCATTCTGCACTTATTCTCCTCTACCGGGCTGTTGAGGTGCCG
ACGACGAATTAATTGTTGTAAAGCACCAGGGCAAACGCTACGAGGTGGAG
CTCGATCCTTCCCTGAATGGCGAAACGCTCAAATACCAGCTATTTTCTCT
CACTGGCGTCGAACCCGAGCGGCAGAAGATCCTAGTCAAGGGAGGCCAGC
TTAAAGATGATACACCTCTGTCCTCCCTCAACGCCAAACCCGGCCAAACG
TTCATGATGATGGGCACTCCGTCGGGCGGTCAAGGTGCTGGAGACTTGGG
TAGACCAAAGGAAGTCGTCAAGTTTTTGGAAGACATGACGGAAGCTGAAG
CTGCCAGGGCGGAGGGTGCAACTCCTGCAGGTCTGCAGAACCTTGGAAAT
ACTTGCTACCTGAACTCAACGCTACAGACACTACGGAGCGTTCCCGAACT
CCAGGATGCGCTGCTCAAATACCGACCTTCTGGGGGCTCTTCTGGAGGTT
CTAGCCTTTCGAACCTCAGTAGTCTCGGTCTTGGCGGCTTGGGAGCTTCT
ATGGATCTCACGTCCTCTCTGCGGGACCTCTTCAAGCAAATGTCGGAGAC
GCAGGAAGGTTTCCCGCCGCTTATGTTTCTCAACGCGCTTCGAAATGCTT
TCCCCCAATTTGCTCAAAGGGATCGCAATGGACATGGCTATGCTCAACAG
GATGCCGAAGAGGCCTGGTCACAGATCGTGAGTCAGCTGCGTAACAAGCT
GGTCGTGAAGGAGGGTGAAGGTGACTCTGCCGCCGAAGTTTCCTTCGTGG
ATAAGTACATGGCCGGAGGGTTTGAGTCCACCACCGAATGCGACGAAAAG
GCCGCAAAGGAGGCTGGTGAAGAACCTACTAATAGCTCCGATGTGTTTTA
CAAGCTTGATTGTCATATTGGTAAAGAGACTAACCATTTGCACGACGGTA
TTATGGCTGGTCTCGAGGAGAAGATCGAAAAGCGGTCCTCTACTCTTGAC
CGCGATGCCGTATATACCAAACGTTCACGCATTGCGCGCTTGCCCAAGTA
CTTGACGGTGCATTTCGTTCGGTTCTTCTGGAAGCGCGAAACACAGAAGA
AGGCCAAGATTATGCGAAAGGTCACATTCCCCGCTGAGCTTGATGCGGTG
GACTTCTGCACCGACGAATTGAAAAAGCAGCTCATTCCTGTGAGAGACAA
GGTCCGTGAGATTCGGAAGGAAGAGGTGGATGTTGAACGTGCTCGTAAGC
GTCAAAAGCTCGCTCACCGGAAAGAGGAGGAAGAAAAGAAAGAGGCCGAG
TCCGGGGCAAGCATGGAGCCGATGCAGAAGAAGAAAGCTGCTGAAGAGCG
CAAGGGAGAGTCTAAAGCCGCGGAGAAAGACGGAGATGAGGCCATGACCG
ATGTGTTCAAGTCCGATGCAGACTACGAAGCTGAGAAGACCGCCTCGATT
CTCGCGGCTAAGAAAGAATTGTCTGAGCTCATTGACCCCAGTCTTGCCTC
AGACAGCGGTGTGAACAAGACGGGTCTCTACGAACTACGCGGAGTGATCA
CACATCAGGGTGCAAGTGCAGACAGCGGACATTACACCGCGTACGTGAAA
AAGCAGTCCAGCAGTGATGGTGCAAGCACCGAAGACAAGTGGTGGTGGTT
CAACGATGAGAAGGTTACCGAAGTGGAAGGGGACAAGATTGAGACGCTTG
CTGGTGGTGATGGCTTCTATACCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0016579protein deubiquitination
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002149ATCC10864_002149Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002149-T1ATCC10864_002149-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002149-T1.cdsATCC10864_002149-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002149-T1.exon3ATCC10864_002149-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002149-T1.exon2ATCC10864_002149-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002149-T1.exon1ATCC10864_002149-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR044635
PFAMPF00443
InterProIPR001394
InterProIPR000626
InterProIPR028889
InterProIPR018200
InterProIPR029071
PFAMPF00240
PFAMPF13423
InterProIPR038765
Properties
Property NameValue
NoteMEROPS:MER0004316
NoteBUSCO:EOG09263BGW
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:419419..421280 -
Powered by Drupal