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ATCC10864_002150-T1, ATCC10864_002150-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002150-T1
Unique NameATCC10864_002150-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:421992..422796+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002150-T1 ID=ATCC10864_002150-T1|Name=ATCC10864_002150-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=805bp|location=Sequence derived from alignment at MCQH01000048:421992..422796+ (Aspergillus niger ATCC 10864)
ATGGTGATTATCAACCTTGTCCAGGGGATCGGTTTACAATCCAAGCTAAC
AGAACCAGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCA
TTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAG
ACAGTACGTTGGGCCGGTTCCCATCCCCTCACCCTTTTGGGTCGGACCAG
GCTAATTATGTATCTGGATAGCAATGTCCCCGAAATTGAAGCCGCAACTT
CTCCGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAG
AGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAAT
CAAGCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGT
TCCTGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTG
AAGGGATATGACATTTCATTCCTCATTACGAACTTCCATACTGAACAGAT
GCTGAAACACAAATTGGTGGACTTCATCATTCAATTGTATGTTTCATCTG
CCTTGTCCATATGTCATTCGATCAATGAGAGGCTAACGATTTCTTCGTCT
AATAGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCGT
ATGTGTCCATGTCCATCTGATTGATGGAGGCTTCTAACCCACATTTGCTG
TAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGGT
AAGTCGCCCTGGCTACTTCAGCTGAACCTGGCTGATAAAATTACAGTTTG
ATTAG
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Coding sequence (CDS) from alignment at MCQH01000048:421992..422796+

>ATCC10864_002150-T1 ID=ATCC10864_002150-T1|Name=ATCC10864_002150-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3060bp|location=Sequence derived from alignment at MCQH01000048:421992..422796+ (Aspergillus niger ATCC 10864)
ATGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGAC
GGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACACA
ATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCC
CTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGT
GAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAAC
ATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCC
TTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCT
CATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACT
TCATCATTCAATTTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAG
CTCTTCTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACC
GTTTGATTAGATGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGAT
CTTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCC
GAAAGACACAATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACT
TCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCG
AGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGAT
GAGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCG
CGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACA
TTTCATTCCTCATTACGAACTTCCATACTGAACAGATGCTGAAACACAAA
TTGGTGGACTTCATCATTCAATTTATGGAGGAAGTGGATAAGGAAATCTC
GGAAATGAAGCTCTTCTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGT
TCTTGACACCGTTTGATTAGATGTCTCAATCATTGCGTCCGTACCTTTTG
GCTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTC
TCAAACCTCCGAAAGACACAATGTCCCCGAAATTGAAGCCGCAACTTCTC
CGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGG
GTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAA
GCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCC
TGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAG
GGATATGACATTTCATTCCTCATTACGAACTTCCATACTGAACAGATGCT
GAAACACAAATTGGTGGACTTCATCATTCAATTTATGGAGGAAGTGGATA
AGGAAATCTCGGAAATGAAGCTCTTCTTGAATGCTCGTGCTCGTTTCGTT
GCTGAGTCGTTCTTGACACCGTTTGATTAGATGTCTCAATCATTGCGTCC
GTACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGA
ACTTCGCTTCTCAAACCTCCGAAAGACACAATGTCCCCGAAATTGAAGCC
GCAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGA
GAACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCA
TCCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTC
ACTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAA
GCCAGTGAAGGGATATGACATTTCATTCCTCATTACGAACTTCCATACTG
AACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCAATTTATGGAG
GAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCTTGAATGCTCGTGC
TCGTTTCGTTGCTGAGTCGTTCTTGACACCGTTTGATTAGATGTCTCAAT
CATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTC
GCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACACAATGTCCCCGA
AATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCT
CCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTC
CGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGT
CCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTC
TACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCTCATTACGAAC
TTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCA
ATTTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCTTGA
ATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGTTTGATTAG
ATGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGAC
GGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACACA
ATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCC
CTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGT
GAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAAC
ATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCC
TTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCT
CATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACT
TCATCATTCAATTTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAG
CTCTTCTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACC
GTTTGATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030041actin filament polymerization
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARPC4ATCC10864_002150Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002150-T1ATCC10864_002150-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002150-T1.exon1ATCC10864_002150-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002150-T1.exon2ATCC10864_002150-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002150-T1.exon3ATCC10864_002150-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002150-T1.exon4ATCC10864_002150-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_002150-T1.exon5ATCC10864_002150-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_002150-T1.exon6ATCC10864_002150-T1.exon6Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002150-T1.cdsATCC10864_002150-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF05856
InterProIPR008384
InterProIPR034666
Properties
Property NameValue
NoteBUSCO:EOG09265CCT
ProductActin- protein 2/3 complex subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:421992..422796 +
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