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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:480003..483463+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002167-T1 ID=ATCC10864_002167-T1|Name=ATCC10864_002167-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=3461bp|location=Sequence derived from alignment at MCQH01000048:480003..483463+ (Aspergillus niger ATCC 10864) ATGCTTTGGGGTCATCCCTGCACTCCCTGTCGTAGGGATGTCCTACGCTT
TTGTTCGCAGAGATTGCGCTCGCCACGCATCGTACGGCCACAATCTTCAT
CATTGCTAGCAAGGTATCTTGCGACGCAGTCTGCAGCGCGTTCTACTGAG
GAGACACCTAAACGGCAATCTCTTGCAGGTGGGTGGCTCAGCTGTTTAGA
GATGCGAAAGCCCTATATACTGATTTCGCAGTCCCCGCTTCCGCTAGGTT
CAACGAGATTGGAGTCCAACAATTAAGCGACCATGTCTACTCCCAAGTAT
TTCTTCAGAAGACGGAACCGCCAGATCCCAACTTAGTCGCTTTGTCAAAA
GAACATCTGTCAAGGCACGATTTACTCGGAAAGTCACAAGATGCCGCGGA
TCCCATCGCCTTTGACATGCCCGCCCTTCAAGGGCAATCACTTGATGAGC
ATTTCTACAAACTGGGTATGGATGCGTCAGAGCCATATCTCGCCTATTCC
AAACAATACACTATGGCAAACTCACCGGAGAAGCCGCGCAAATGGATAAA
ACGCAGTGGGTGGACAAAGTACAACAGCGACGGGTCGTGGGAAGCGGTTG
ATGCACCGAATGAGTCCATGTTGACATTCGACACCGAAGTCATGTACAAG
GAGCATTCTTTTGCTGTTATGGCTTGCGCTGTTAGTCCTACAGCTTGGTA
TGCTTGGATATCGCCTTGGTTGTTAGGAGAATCGGAAAACGAAGTCCAGC
TCATTCCCCTCGGAGACCCATCAAAGCCACGAATTGTCGTGGGCCATAAT
ATTGGTTATGATCGCGCTCGTGTTCTCGAGGAGTATGATATGACTCAGTC
TTGCAACTTCTTTCTTGATACCATGTCGCTTCACGTGGCTGTGAATGGTA
TGTGTTCACAACAGAGGCCTACCTGGATGCGACACAAGAAGAATAGGGAT
TTGAGAAATAAGATCGCAAGTGAGAGTAATTCAGTTGAGCTGGCAGCCAT
ACTAGAAAGTAAGATGCTCAGTGATGAGGAAGAAGAACTCTGGGTAGGGA
GGAGCTCGGTGAATTCGCTTCGCGACGTGGCCAAGTTTCATTGTGATGTT
ACGATCGATAAGGCGCAACGTGACTATTTCGGTGAACTTGACAGAAATGG
AATCCTGGGGAAGTTGGAGGAACTGCTTGATTATTGTGCAGCAGATGTTG
CCATTACCCATCGAGTGTACAAGAAGGTTTTCCCTAACTTCCTTGAAGTC
TGTCCGCACCCTGTCAGCTTTGGCGCCCTTCGACATCTCTCTTCCGTCAT
CTTGCCAGTGAACGAGACATGGAAGGAGTACATCGCCAATGCGGAAGCGA
CCTATCACCAGCGCCTTGAGGATGTTCAACGGAAAATGATCGAACTTTGT
GAGGAAGCCCTGAAGGTCAAAGACTCTCCGGACATCTACATGAACGATCC
CTGGCTGCGGCAGTTGGACTGGTCTGGCCAGGAGGTGAAGATGGTCAAAG
GAAAAAAGAAAGGCGACCCTCCGCGACCAGCTGCCAGGCAGAAGAAGCCG
GGTATGCCGAAGTGGTATAAAGATCTGTTTGCCACCAACACATCGGACAT
CAGCTTATCTGTGCGTACTCGTATCGCGCCTATACTTCTCAAACTGTCGT
GGGACGGTTACCCTTTGACATGGTCCGATAAGTATGGGTGGACTTTCAAA
GTCCCGCGCGAGCTTGTCAAGAATTATGAGAACCAGCCTGTCGTTCTGTG
TGACATGTCCGAGGAGAAGAACCCCGAATTGCAGAATGACAGAAAACACG
TTTACTTCAAGCTACCGCACAAAGATGGGCCTCAAGCGCGGTGCACAAAT
CCTCTGGCGAAGGGGTACATGCAGTACTTTGAACGTGGAACGCTCTCATC
CCAGTACGCCCTCGCCAAAGAGGCGCTAGAGATGAATGCATCCTGCTCTT
ACTGGATCAGTGCCCGTGACCGTATCATGGGTCAAATGGTAGTCTACGAG
GACGAAGTGCGAGGCCTGACATCGAGTGGTAAGACAGACCACCGGCTCGG
GTTCATTTTGCCACAGATCATCCCTATGGGAACCATCACTCGAAGAGCGG
TGGAAAACACATGGCTTACAGCCAGTAATGCAAAAGGGAACCGTGTCGGG
TCTGAGCTCAAGGCTATGATCAAAGCTCCACCTGGCTACTCTTTTGTCGG
CGCAGATGTCGACTCTCAGGAGCTATGGATTGCCAGTCTTGTTGGAGACG
CTCAATTCCAAATTCACGGCGGTAACGCCATTGGTTTCATGACACTGGAA
GGGTCCAAGGCAGCGGGGACGGATATGCACTCACGCACAGCCCAGATCCT
GGGTATCTCACGTAACGATGCCAAGGTGTTCAACTATGGACGCATCTATG
GAGCTGGCGTCAAGTTCGCCGCTACTTTGCTGCGTCAGTTCAATCCGTCC
ATGTCGGAAAGGCAGACCCAGGAGGTTGCAACAAAATTATATAAAGAGAC
GAAGGGTACCCGTACGACTCGTCGTATACTCTGTGAAGGCCCTTTCTGGC
GGGGCGGAACCGAGTCGTTCGTCTTCAACAAACTAGAAGAATTCGCTGAG
CAAGAGAGGCCCAGAACACCCACTTTAGGGGCCGGAATTACTGAAGCGCT
GATGCGGCGCTTCATCAACAAGGGAAGCTTCATGACATCAAGAATCAACT
GGGCCATTCAGTCGTCTGGCGTTGATTACCTCCATCTCTTAATTGTCGCC
ATGGACTACCTCATTCGTCGCTTCAACATCGCCGCTCGTCTAGCAATCAC
TGTCCACGACGAAATCAGGTACCTAGTTAAAGACGAAGACAAGTATCGAG
CTGCGCTGGCTTTGCAGGTTGCCAACGTGTGGACCCGCGCGATGTTCTCT
CAGCAAGTCGGAATAAACGACCTTCCTCAGTCCTGCGCCTACTTCTCTGC
TGTGGACATTGACCACGTCCTGCGGAAGGAGGTTGATATGGACTGCGTGA
CCCCATCCCACCCGCACAAGATTCCCCACGGCGAGAGTCTTGACGTTGCG
CAGCTTTTGGACAAGAATGAAAAGGCATACCTTGACCCTGCCATCATCCC
CAATTCGCCACCCAACCCCCAGCAGTACGAGTACACGCCACGACCGTCAG
TCATGTCCGCACTTCAAACTTCTCACCCGGCCTTCATCCGCGCTCAGATC
TCGAAGGACGACAACGAACTCCGCGAAATCATCAAAGAGCTCACTAAACA
AAAGTCCACACTGGCGCCACCAAACGCGCGTTTGCCTAGCAATCGTGCAA
AACCCTATGGCTCGGTGGCAGCGGAACCACAAAAGGCCATTCTGATGGAC
ATTGGACCCAGTCTCTACCCAGACTTTAAAAGCCTTCCCCAAGGGAGCCG
GTCTCCCCAGGTGAGCTTTAACCGTCAGAACTGGAAGCCGAGACCGTCTG
CCCGAGCTTAG back to topCoding sequence (CDS) from alignment at MCQH01000048:480003..483463+ >ATCC10864_002167-T1 ID=ATCC10864_002167-T1|Name=ATCC10864_002167-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6816bp|location=Sequence derived from alignment at MCQH01000048:480003..483463+ (Aspergillus niger ATCC 10864) ATGCTTTGGGGTCATCCCTGCACTCCCTGTCGTAGGGATGTCCTACGCTT TTGTTCGCAGAGATTGCGCTCGCCACGCATCGTACGGCCACAATCTTCAT CATTGCTAGCAAGGTATCTTGCGACGCAGTCTGCAGCGCGTTCTACTGAG GAGACACCTAAACGGCAATCTCTTGCAGTCCCCGCTTCCGCTAGGTTCAA CGAGATTGGAGTCCAACAATTAAGCGACCATGTCTACTCCCAAGTATTTC TTCAGAAGACGGAACCGCCAGATCCCAACTTAGTCGCTTTGTCAAAAGAA CATCTGTCAAGGCACGATTTACTCGGAAAGTCACAAGATGCCGCGGATCC CATCGCCTTTGACATGCCCGCCCTTCAAGGGCAATCACTTGATGAGCATT TCTACAAACTGGGTATGGATGCGTCAGAGCCATATCTCGCCTATTCCAAA CAATACACTATGGCAAACTCACCGGAGAAGCCGCGCAAATGGATAAAACG CAGTGGGTGGACAAAGTACAACAGCGACGGGTCGTGGGAAGCGGTTGATG CACCGAATGAGTCCATGTTGACATTCGACACCGAAGTCATGTACAAGGAG CATTCTTTTGCTGTTATGGCTTGCGCTGTTAGTCCTACAGCTTGGTATGC TTGGATATCGCCTTGGTTGTTAGGAGAATCGGAAAACGAAGTCCAGCTCA TTCCCCTCGGAGACCCATCAAAGCCACGAATTGTCGTGGGCCATAATATT GGTTATGATCGCGCTCGTGTTCTCGAGGAGTATGATATGACTCAGTCTTG CAACTTCTTTCTTGATACCATGTCGCTTCACGTGGCTGTGAATGGTATGT GTTCACAACAGAGGCCTACCTGGATGCGACACAAGAAGAATAGGGATTTG AGAAATAAGATCGCAAGTGAGAGTAATTCAGTTGAGCTGGCAGCCATACT AGAAAGTAAGATGCTCAGTGATGAGGAAGAAGAACTCTGGGTAGGGAGGA GCTCGGTGAATTCGCTTCGCGACGTGGCCAAGTTTCATTGTGATGTTACG ATCGATAAGGCGCAACGTGACTATTTCGGTGAACTTGACAGAAATGGAAT CCTGGGGAAGTTGGAGGAACTGCTTGATTATTGTGCAGCAGATGTTGCCA TTACCCATCGAGTGTACAAGAAGGTTTTCCCTAACTTCCTTGAAGTCTGT CCGCACCCTGTCAGCTTTGGCGCCCTTCGACATCTCTCTTCCGTCATCTT GCCAGTGAACGAGACATGGAAGGAGTACATCGCCAATGCGGAAGCGACCT ATCACCAGCGCCTTGAGGATGTTCAACGGAAAATGATCGAACTTTGTGAG GAAGCCCTGAAGGTCAAAGACTCTCCGGACATCTACATGAACGATCCCTG GCTGCGGCAGTTGGACTGGTCTGGCCAGGAGGTGAAGATGGTCAAAGGAA AAAAGAAAGGCGACCCTCCGCGACCAGCTGCCAGGCAGAAGAAGCCGGGT ATGCCGAAGTGGTATAAAGATCTGTTTGCCACCAACACATCGGACATCAG CTTATCTGTGCGTACTCGTATCGCGCCTATACTTCTCAAACTGTCGTGGG ACGGTTACCCTTTGACATGGTCCGATAAGTATGGGTGGACTTTCAAAGTC CCGCGCGAGCTTGTCAAGAATTATGAGAACCAGCCTGTCGTTCTGTGTGA CATGTCCGAGGAGAAGAACCCCGAATTGCAGAATGACAGAAAACACGTTT ACTTCAAGCTACCGCACAAAGATGGGCCTCAAGCGCGGTGCACAAATCCT CTGGCGAAGGGGTACATGCAGTACTTTGAACGTGGAACGCTCTCATCCCA GTACGCCCTCGCCAAAGAGGCGCTAGAGATGAATGCATCCTGCTCTTACT GGATCAGTGCCCGTGACCGTATCATGGGTCAAATGGTAGTCTACGAGGAC GAAGTGCGAGGCCTGACATCGAGTGGTAAGACAGACCACCGGCTCGGGTT CATTTTGCCACAGATCATCCCTATGGGAACCATCACTCGAAGAGCGGTGG AAAACACATGGCTTACAGCCAGTAATGCAAAAGGGAACCGTGTCGGGTCT GAGCTCAAGGCTATGATCAAAGCTCCACCTGGCTACTCTTTTGTCGGCGC AGATGTCGACTCTCAGGAGCTATGGATTGCCAGTCTTGTTGGAGACGCTC AATTCCAAATTCACGGCGGTAACGCCATTGGTTTCATGACACTGGAAGGG TCCAAGGCAGCGGGGACGGATATGCACTCACGCACAGCCCAGATCCTGGG TATCTCACGTAACGATGCCAAGGTGTTCAACTATGGACGCATCTATGGAG CTGGCGTCAAGTTCGCCGCTACTTTGCTGCGTCAGTTCAATCCGTCCATG TCGGAAAGGCAGACCCAGGAGGTTGCAACAAAATTATATAAAGAGACGAA GGGTACCCGTACGACTCGTCGTATACTCTGTGAAGGCCCTTTCTGGCGGG GCGGAACCGAGTCGTTCGTCTTCAACAAACTAGAAGAATTCGCTGAGCAA GAGAGGCCCAGAACACCCACTTTAGGGGCCGGAATTACTGAAGCGCTGAT GCGGCGCTTCATCAACAAGGGAAGCTTCATGACATCAAGAATCAACTGGG CCATTCAGTCGTCTGGCGTTGATTACCTCCATCTCTTAATTGTCGCCATG GACTACCTCATTCGTCGCTTCAACATCGCCGCTCGTCTAGCAATCACTGT CCACGACGAAATCAGGTACCTAGTTAAAGACGAAGACAAGTATCGAGCTG CGCTGGCTTTGCAGGTTGCCAACGTGTGGACCCGCGCGATGTTCTCTCAG CAAGTCGGAATAAACGACCTTCCTCAGTCCTGCGCCTACTTCTCTGCTGT GGACATTGACCACGTCCTGCGGAAGGAGGTTGATATGGACTGCGTGACCC CATCCCACCCGCACAAGATTCCCCACGGCGAGAGTCTTGACGTTGCGCAG CTTTTGGACAAGAATGAAAAGGCATACCTTGACCCTGCCATCATCCCCAA TTCGCCACCCAACCCCCAGCAGTACGAGTACACGCCACGACCGTCAGTCA TGTCCGCACTTCAAACTTCTCACCCGGCCTTCATCCGCGCTCAGATCTCG AAGGACGACAACGAACTCCGCGAAATCATCAAAGAGCTCACTAAACAAAA GTCCACACTGGCGCCACCAAACGCGCGTTTGCCTAGCAATCGTGCAAAAC CCTATGGCTCGGTGGCAGCGGAACCACAAAAGGCCATTCTGATGGACATT GGACCCAGTCTCTACCCAGACTTTAAAAGCCTTCCCCAAGGGAGCCGGTC TCCCCAGGTGAGCTTTAACCGTCAGAACTGGAAGCCGAGACCGTCTGCCC GAGCTTAGATGCTTTGGGGTCATCCCTGCACTCCCTGTCGTAGGGATGTC CTACGCTTTTGTTCGCAGAGATTGCGCTCGCCACGCATCGTACGGCCACA ATCTTCATCATTGCTAGCAAGGTATCTTGCGACGCAGTCTGCAGCGCGTT CTACTGAGGAGACACCTAAACGGCAATCTCTTGCAGTCCCCGCTTCCGCT AGGTTCAACGAGATTGGAGTCCAACAATTAAGCGACCATGTCTACTCCCA AGTATTTCTTCAGAAGACGGAACCGCCAGATCCCAACTTAGTCGCTTTGT CAAAAGAACATCTGTCAAGGCACGATTTACTCGGAAAGTCACAAGATGCC GCGGATCCCATCGCCTTTGACATGCCCGCCCTTCAAGGGCAATCACTTGA TGAGCATTTCTACAAACTGGGTATGGATGCGTCAGAGCCATATCTCGCCT ATTCCAAACAATACACTATGGCAAACTCACCGGAGAAGCCGCGCAAATGG ATAAAACGCAGTGGGTGGACAAAGTACAACAGCGACGGGTCGTGGGAAGC GGTTGATGCACCGAATGAGTCCATGTTGACATTCGACACCGAAGTCATGT ACAAGGAGCATTCTTTTGCTGTTATGGCTTGCGCTGTTAGTCCTACAGCT TGGTATGCTTGGATATCGCCTTGGTTGTTAGGAGAATCGGAAAACGAAGT CCAGCTCATTCCCCTCGGAGACCCATCAAAGCCACGAATTGTCGTGGGCC ATAATATTGGTTATGATCGCGCTCGTGTTCTCGAGGAGTATGATATGACT CAGTCTTGCAACTTCTTTCTTGATACCATGTCGCTTCACGTGGCTGTGAA TGGTATGTGTTCACAACAGAGGCCTACCTGGATGCGACACAAGAAGAATA GGGATTTGAGAAATAAGATCGCAAGTGAGAGTAATTCAGTTGAGCTGGCA GCCATACTAGAAAGTAAGATGCTCAGTGATGAGGAAGAAGAACTCTGGGT AGGGAGGAGCTCGGTGAATTCGCTTCGCGACGTGGCCAAGTTTCATTGTG ATGTTACGATCGATAAGGCGCAACGTGACTATTTCGGTGAACTTGACAGA AATGGAATCCTGGGGAAGTTGGAGGAACTGCTTGATTATTGTGCAGCAGA TGTTGCCATTACCCATCGAGTGTACAAGAAGGTTTTCCCTAACTTCCTTG AAGTCTGTCCGCACCCTGTCAGCTTTGGCGCCCTTCGACATCTCTCTTCC GTCATCTTGCCAGTGAACGAGACATGGAAGGAGTACATCGCCAATGCGGA AGCGACCTATCACCAGCGCCTTGAGGATGTTCAACGGAAAATGATCGAAC TTTGTGAGGAAGCCCTGAAGGTCAAAGACTCTCCGGACATCTACATGAAC GATCCCTGGCTGCGGCAGTTGGACTGGTCTGGCCAGGAGGTGAAGATGGT CAAAGGAAAAAAGAAAGGCGACCCTCCGCGACCAGCTGCCAGGCAGAAGA AGCCGGGTATGCCGAAGTGGTATAAAGATCTGTTTGCCACCAACACATCG GACATCAGCTTATCTGTGCGTACTCGTATCGCGCCTATACTTCTCAAACT GTCGTGGGACGGTTACCCTTTGACATGGTCCGATAAGTATGGGTGGACTT TCAAAGTCCCGCGCGAGCTTGTCAAGAATTATGAGAACCAGCCTGTCGTT CTGTGTGACATGTCCGAGGAGAAGAACCCCGAATTGCAGAATGACAGAAA ACACGTTTACTTCAAGCTACCGCACAAAGATGGGCCTCAAGCGCGGTGCA CAAATCCTCTGGCGAAGGGGTACATGCAGTACTTTGAACGTGGAACGCTC TCATCCCAGTACGCCCTCGCCAAAGAGGCGCTAGAGATGAATGCATCCTG CTCTTACTGGATCAGTGCCCGTGACCGTATCATGGGTCAAATGGTAGTCT ACGAGGACGAAGTGCGAGGCCTGACATCGAGTGGTAAGACAGACCACCGG CTCGGGTTCATTTTGCCACAGATCATCCCTATGGGAACCATCACTCGAAG AGCGGTGGAAAACACATGGCTTACAGCCAGTAATGCAAAAGGGAACCGTG TCGGGTCTGAGCTCAAGGCTATGATCAAAGCTCCACCTGGCTACTCTTTT GTCGGCGCAGATGTCGACTCTCAGGAGCTATGGATTGCCAGTCTTGTTGG AGACGCTCAATTCCAAATTCACGGCGGTAACGCCATTGGTTTCATGACAC TGGAAGGGTCCAAGGCAGCGGGGACGGATATGCACTCACGCACAGCCCAG ATCCTGGGTATCTCACGTAACGATGCCAAGGTGTTCAACTATGGACGCAT CTATGGAGCTGGCGTCAAGTTCGCCGCTACTTTGCTGCGTCAGTTCAATC CGTCCATGTCGGAAAGGCAGACCCAGGAGGTTGCAACAAAATTATATAAA GAGACGAAGGGTACCCGTACGACTCGTCGTATACTCTGTGAAGGCCCTTT CTGGCGGGGCGGAACCGAGTCGTTCGTCTTCAACAAACTAGAAGAATTCG CTGAGCAAGAGAGGCCCAGAACACCCACTTTAGGGGCCGGAATTACTGAA GCGCTGATGCGGCGCTTCATCAACAAGGGAAGCTTCATGACATCAAGAAT CAACTGGGCCATTCAGTCGTCTGGCGTTGATTACCTCCATCTCTTAATTG TCGCCATGGACTACCTCATTCGTCGCTTCAACATCGCCGCTCGTCTAGCA ATCACTGTCCACGACGAAATCAGGTACCTAGTTAAAGACGAAGACAAGTA TCGAGCTGCGCTGGCTTTGCAGGTTGCCAACGTGTGGACCCGCGCGATGT TCTCTCAGCAAGTCGGAATAAACGACCTTCCTCAGTCCTGCGCCTACTTC TCTGCTGTGGACATTGACCACGTCCTGCGGAAGGAGGTTGATATGGACTG CGTGACCCCATCCCACCCGCACAAGATTCCCCACGGCGAGAGTCTTGACG TTGCGCAGCTTTTGGACAAGAATGAAAAGGCATACCTTGACCCTGCCATC ATCCCCAATTCGCCACCCAACCCCCAGCAGTACGAGTACACGCCACGACC GTCAGTCATGTCCGCACTTCAAACTTCTCACCCGGCCTTCATCCGCGCTC AGATCTCGAAGGACGACAACGAACTCCGCGAAATCATCAAAGAGCTCACT AAACAAAAGTCCACACTGGCGCCACCAAACGCGCGTTTGCCTAGCAATCG TGCAAAACCCTATGGCTCGGTGGCAGCGGAACCACAAAAGGCCATTCTGA TGGACATTGGACCCAGTCTCTACCCAGACTTTAAAAGCCTTCCCCAAGGG AGCCGGTCTCCCCAGGTGAGCTTTAACCGTCAGAACTGGAAGCCGAGACC GTCTGCCCGAGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005760 | gamma DNA polymerase complex |
Vocabulary: Molecular Function
Term | Definition |
GO:0003677 | DNA binding |
GO:0003887 | DNA-directed DNA polymerase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0006260 | DNA replication |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
Database | Accession |
InterPro | IPR012337 |
InterPro | IPR043502 |
InterPro | IPR001098 |
PFAM | PF00476 |
InterPro | IPR019760 |
InterPro | IPR002297 |
PFAM | PF18136 |
InterPro | IPR041336 |
Properties
Property Name | Value |
Note | BUSCO:EOG092603KJ |
Product | DNA-directed DNA polymerase gamma mip1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
MCQH01000048 | supercontig | MCQH01000048:480003..483463 + |
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