You are here

Home

ATCC10864_002211-T1, ATCC10864_002211-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002211-T1
Unique NameATCC10864_002211-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:618449..619474+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002211-T1 ID=ATCC10864_002211-T1|Name=ATCC10864_002211-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1026bp|location=Sequence derived from alignment at MCQH01000048:618449..619474+ (Aspergillus niger ATCC 10864)
ATGGTCAAGCGCAAGGAACTCAAAGACAATGATGTCGAGATGTCGGGGAC
GGATCCCCGCGTCGACGGCGACGACTCCGACGAGGTACATACATACCAAT
ACCCCTCCAAGCAATATACAAGCCCAGCCAAGCAACAACCTGAAATACGC
AAAGTAGAATTAACACATTGAGTCAGGACATGGACATGGTCAACGTCGAT
TTCGAATGGTTCGACCCTCAACCGGCTGTCGACTTCCACGGTCTGAAGAA
CCTCCTCCGCCAGCTCTTCGACACCGACGCCCAGATCTTCGACATGTCCG
CATTGGCCGATTTGATCCTCTCGCAACCTCTGCTTGGATCGACTGTTAAA
GTAGATGGGAATGAGTCGGATCCGTATGCGTTCTTGACTGTGTTGAACCT
TCAGGAGCACAAGGTGCGTCTCCGTTCTCCTTGGCATAAGGATAGAAGGA
AGAGAATCTAACAAAAACCAGGACAAACCCGTAATCAAAGACCTCACAGC
CTACCTCCAGCGCAAAGCCAATGCCGTACCAACACTCGCACCCCTGGCTC
AACTCCTCTCCCAAACTCCCATCCCTCCCATCGGCCTGATCCTGACGGAA
CGTCTCATCAACATGCCCGCAGAGGTCGTACCGCCTATGTACACGATGCT
GCAAGAGGAAATCGAATGGGCGATCAAGGACAAGGAGCCTTACAATTTCT
CGCACTATTTGATCGTGTCGAAGACGTACGAAGAGGTCGAGTCGAAGCTA
GATGCGGAGGAATCGCGGCCGCAAAAGAAGAAGAAGAAGGCTGCGGGTGG
GGAGAAGGCCGAGCGGTTCCTCTTCCATCCTGAGGATGAGGTTCTGGAAA
GGCATGCCGTGTGTGTTGGGCCTGTGGAGTATACGCATAAGGCGGAGGAG
GGACTGTCGGATGCGAAGCGCGCATTCCAGGATTTGGGTATTGTGACGAA
GGGGAGCTTGATTTTGTTGGAGGCGAGCAAGTTGGATGGGGCGGTTAAAG
ATATGGCGGAGTACTTTAAGCCATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000048:618449..619474+

>ATCC10864_002211-T1 ID=ATCC10864_002211-T1|Name=ATCC10864_002211-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2628bp|location=Sequence derived from alignment at MCQH01000048:618449..619474+ (Aspergillus niger ATCC 10864)
ATGGTCAAGCGCAAGGAACTCAAAGACAATGATGTCGAGATGTCGGGGAC
GGATCCCCGCGTCGACGGCGACGACTCCGACGAGGACATGGACATGGTCA
ACGTCGATTTCGAATGGTTCGACCCTCAACCGGCTGTCGACTTCCACGGT
CTGAAGAACCTCCTCCGCCAGCTCTTCGACACCGACGCCCAGATCTTCGA
CATGTCCGCATTGGCCGATTTGATCCTCTCGCAACCTCTGCTTGGATCGA
CTGTTAAAGTAGATGGGAATGAGTCGGATCCGTATGCGTTCTTGACTGTG
TTGAACCTTCAGGAGCACAAGGACAAACCCGTAATCAAAGACCTCACAGC
CTACCTCCAGCGCAAAGCCAATGCCGTACCAACACTCGCACCCCTGGCTC
AACTCCTCTCCCAAACTCCCATCCCTCCCATCGGCCTGATCCTGACGGAA
CGTCTCATCAACATGCCCGCAGAGGTCGTACCGCCTATGTACACGATGCT
GCAAGAGGAAATCGAATGGGCGATCAAGGACAAGGAGCCTTACAATTTCT
CGCACTATTTGATCGTGTCGAAGACGTACGAAGAGGTCGAGTCGAAGCTA
GATGCGGAGGAATCGCGGCCGCAAAAGAAGAAGAAGAAGGCTGCGGGTGG
GGAGAAGGCCGAGCGGTTCCTCTTCCATCCTGAGGATGAGGTTCTGGAAA
GGCATGCCGTGTGTGTTGGGCCTGTGGAGTATACGCATAAGGCGGAGGAG
GGACTGTCGGATGCGAAGCGCGCATTCCAGGATTTGGGTATTGTGACGAA
GGGGAGCTTGATTTTGTTGGAGGCGAGCAAGTTGGATGGGGCGGTTAAAG
ATATGGCGGAGTACTTTAAGCCATAGATGGTCAAGCGCAAGGAACTCAAA
GACAATGATGTCGAGATGTCGGGGACGGATCCCCGCGTCGACGGCGACGA
CTCCGACGAGGACATGGACATGGTCAACGTCGATTTCGAATGGTTCGACC
CTCAACCGGCTGTCGACTTCCACGGTCTGAAGAACCTCCTCCGCCAGCTC
TTCGACACCGACGCCCAGATCTTCGACATGTCCGCATTGGCCGATTTGAT
CCTCTCGCAACCTCTGCTTGGATCGACTGTTAAAGTAGATGGGAATGAGT
CGGATCCGTATGCGTTCTTGACTGTGTTGAACCTTCAGGAGCACAAGGAC
AAACCCGTAATCAAAGACCTCACAGCCTACCTCCAGCGCAAAGCCAATGC
CGTACCAACACTCGCACCCCTGGCTCAACTCCTCTCCCAAACTCCCATCC
CTCCCATCGGCCTGATCCTGACGGAACGTCTCATCAACATGCCCGCAGAG
GTCGTACCGCCTATGTACACGATGCTGCAAGAGGAAATCGAATGGGCGAT
CAAGGACAAGGAGCCTTACAATTTCTCGCACTATTTGATCGTGTCGAAGA
CGTACGAAGAGGTCGAGTCGAAGCTAGATGCGGAGGAATCGCGGCCGCAA
AAGAAGAAGAAGAAGGCTGCGGGTGGGGAGAAGGCCGAGCGGTTCCTCTT
CCATCCTGAGGATGAGGTTCTGGAAAGGCATGCCGTGTGTGTTGGGCCTG
TGGAGTATACGCATAAGGCGGAGGAGGGACTGTCGGATGCGAAGCGCGCA
TTCCAGGATTTGGGTATTGTGACGAAGGGGAGCTTGATTTTGTTGGAGGC
GAGCAAGTTGGATGGGGCGGTTAAAGATATGGCGGAGTACTTTAAGCCAT
AGATGGTCAAGCGCAAGGAACTCAAAGACAATGATGTCGAGATGTCGGGG
ACGGATCCCCGCGTCGACGGCGACGACTCCGACGAGGACATGGACATGGT
CAACGTCGATTTCGAATGGTTCGACCCTCAACCGGCTGTCGACTTCCACG
GTCTGAAGAACCTCCTCCGCCAGCTCTTCGACACCGACGCCCAGATCTTC
GACATGTCCGCATTGGCCGATTTGATCCTCTCGCAACCTCTGCTTGGATC
GACTGTTAAAGTAGATGGGAATGAGTCGGATCCGTATGCGTTCTTGACTG
TGTTGAACCTTCAGGAGCACAAGGACAAACCCGTAATCAAAGACCTCACA
GCCTACCTCCAGCGCAAAGCCAATGCCGTACCAACACTCGCACCCCTGGC
TCAACTCCTCTCCCAAACTCCCATCCCTCCCATCGGCCTGATCCTGACGG
AACGTCTCATCAACATGCCCGCAGAGGTCGTACCGCCTATGTACACGATG
CTGCAAGAGGAAATCGAATGGGCGATCAAGGACAAGGAGCCTTACAATTT
CTCGCACTATTTGATCGTGTCGAAGACGTACGAAGAGGTCGAGTCGAAGC
TAGATGCGGAGGAATCGCGGCCGCAAAAGAAGAAGAAGAAGGCTGCGGGT
GGGGAGAAGGCCGAGCGGTTCCTCTTCCATCCTGAGGATGAGGTTCTGGA
AAGGCATGCCGTGTGTGTTGGGCCTGTGGAGTATACGCATAAGGCGGAGG
AGGGACTGTCGGATGCGAAGCGCGCATTCCAGGATTTGGGTATTGTGACG
AAGGGGAGCTTGATTTTGTTGGAGGCGAGCAAGTTGGATGGGGCGGTTAA
AGATATGGCGGAGTACTTTAAGCCATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
BCP1ATCC10864_002211Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002211-T1.exon1ATCC10864_002211-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002211-T1.exon2ATCC10864_002211-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002211-T1.exon3ATCC10864_002211-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002211-T1.cdsATCC10864_002211-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002211-T1ATCC10864_002211-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF13862
InterProIPR025602
Properties
Property NameValue
NoteBUSCO:EOG092649VA
ProductMss4p nuclear export
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:618449..619474 +
Powered by Drupal