You are here

Home

ATCC10864_002220-T1, ATCC10864_002220-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002220-T1
Unique NameATCC10864_002220-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:649213..650724+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002220-T1 ID=ATCC10864_002220-T1|Name=ATCC10864_002220-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1512bp|location=Sequence derived from alignment at MCQH01000048:649213..650724+ (Aspergillus niger ATCC 10864)
ATGCCCCCCGCCAAAATTACCATCATCCACCCCGATCTCGGCATCGGCGG
CGCAGAACGTCTAATCATCGACGTGGCCCTAGCACTGCAATCGCGAGGCC
ACCCCGTCACAATCTACACCTCGCACCGGGATAAATCGCATTGTTTTGAG
GAGGCGCGCGATGGGACACTTGATGTGCAGGTGCGCGGGAATACGATCTT
CCCGGCGCATGTGGGCGGACGGTTGTTTGTGCTCATGGCTATCCTGAGGC
AATTGCATTTGACGTGGGATTTGTTGTGTGGGGAGACTACGAGTGGGGAT
AATGGGGAGGGGGAGGAGGAGGTGTTCATTGTGGATCAGATGCCTGCTTG
TGTGCCCTTTTTGAAGGTGTTTGGTGGGAAGAAGAACAGCAGGAAGCAGA
GGATTTTGTTCTATTGTCATTTTCCGGATCAGTTGCTTGCCAGGCGGGAT
GAGGGGGGTTCGGTACTGCAGCTGCTTAAGGGGTTGTATCGCGTGCCGTT
TGATTGGTTTGAGGGGTGGGCTGTGAGTGCGTCGGATAAGGTGGTTGCGA
ATTCGAGGTTTACGAGAGGGGTTGTTAGTGGGGTGTTTGGGAGGGAGAAG
GTTGGAGATTTGAGTGTCGTTTATCCGTGTGTTGATACGAAGGCTGGGGA
TGGGGGTGAGGGGGTGGTGAAGGATGGGGAGAAGTTGTGGGGTGGGAAGA
AGATCCTACTCAGTGTCAATCGGTTTGAGAGGAAGAAGGACCTGGCGTTG
GCGATTCGTGCCTATCATGGTCTTGGGGAGGAGAAGAGGAAGGGGACTAG
ATTGGTTGTTGCTGGTGGGTATTCCCTTTTGTCTGGCCGTCGAGGCTGCG
CTCGTTGTTTGCTGGTTGAGAGGAGTGTGCTAACTGGTTGTTCGCTTGAT
GCAGGTGGTTACGATAATCGCGTCCAGGAGAATGTGCAGTATCATCGGGA
GCTGGATGAATTGGCGACTGGGTTGGGCTTGCAGACGGCGACATCTAAGA
CGGTTATTTCGGCCCTTTCGATACCCGATTCCATCGATGTGCTCTTCCTG
CTGTCCGTGCCGACGGCGTTCCGGGATACCCTTTTGCTGCAGGCGAAGTT
GCTCCTGTATACGCCGATTAACGAACACTTCGGGATCGTACCGGTTGAGG
CGATGCGGGCTGGCGTGCCGGTGCTTGCGTCGAATACTGGAGGGCCTTTG
GAGACCATTGTGGAGGGCGAAACGGGCTGGCTCCGTGACGCCAAGGTGGA
TGCCGATTGGACTGCGGTGATGGACAAGGTGCTGTACGGCATGAAGCAGG
AGGAACTGGACAGGATGTCTGTGGCCGCGAAAGAGCGTGTCGAGAAGGAG
TTCTCACTGACAGCTATGGGCGAGAAACTCGAGCAGGAAATCGAAGAGAT
GCTCGGCCAGGAACAGCGGCCGTTCCATGGCTTCCAACAGCTTCTTACCT
TCCTTGCATTGGTGGGAGTGGTGCTTGCCCTCGCTGCTGCATTCCTTGTG
AAGCTGCTTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000048:649213..650724+

>ATCC10864_002220-T1 ID=ATCC10864_002220-T1|Name=ATCC10864_002220-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2844bp|location=Sequence derived from alignment at MCQH01000048:649213..650724+ (Aspergillus niger ATCC 10864)
ATGCCCCCCGCCAAAATTACCATCATCCACCCCGATCTCGGCATCGGCGG
CGCAGAACGTCTAATCATCGACGTGGCCCTAGCACTGCAATCGCGAGGCC
ACCCCGTCACAATCTACACCTCGCACCGGGATAAATCGCATTGTTTTGAG
GAGGCGCGCGATGGGACACTTGATGTGCAGGTGCGCGGGAATACGATCTT
CCCGGCGCATGTGGGCGGACGGTTGTTTGTGCTCATGGCTATCCTGAGGC
AATTGCATTTGACGTGGGATTTGTTGTGTGGGGAGACTACGAGTGGGGAT
AATGGGGAGGGGGAGGAGGAGGTGTTCATTGTGGATCAGATGCCTGCTTG
TGTGCCCTTTTTGAAGGTGTTTGGTGGGAAGAAGAACAGCAGGAAGCAGA
GGATTTTGTTCTATTGTCATTTTCCGGATCAGTTGCTTGCCAGGCGGGAT
GAGGGGGGTTCGGTACTGCAGCTGCTTAAGGGGTTGTATCGCGTGCCGTT
TGATTGGTTTGAGGGGTGGGCTGTGAGTGCGTCGGATAAGGTGGTTGCGA
ATTCGAGGTTTACGAGAGGGGTTGTTAGTGGGGTGTTTGGGAGGGAGAAG
GTTGGAGATTTGAGTGTCGTTTATCCGTGTGTTGATACGAAGGCTGGGGA
TGGGGGTGAGGGGGTGGTGAAGGATGGGGAGAAGTTGTGGGGTGGGAAGA
AGATCCTACTCAGTGTCAATCGGTTTGAGAGGAAGAAGGACCTGGCGTTG
GCGATTCGTGCCTATCATGGTCTTGGGGAGGAGAAGAGGAAGGGGACTAG
ATTGGTTGTTGCTGGTGGTTACGATAATCGCGTCCAGGAGAATGTGCAGT
ATCATCGGGAGCTGGATGAATTGGCGACTGGGTTGGGCTTGCAGACGGCG
ACATCTAAGACGGTTATTTCGGCCCTTTCGATACCCGATTCCATCGATGT
GCTCTTCCTGCTGTCCGTGCCGACGGCGTTCCGGGATACCCTTTTGCTGC
AGGCGAAGTTGCTCCTGTATACGCCGATTAACGAACACTTCGGGATCGTA
CCGGTTGAGGCGATGCGGGCTGGCGTGCCGGTGCTTGCGTCGAATACTGG
AGGGCCTTTGGAGACCATTGTGGAGGGCGAAACGGGCTGGCTCCGTGACG
CCAAGGTGGATGCCGATTGGACTGCGGTGATGGACAAGGTGCTGTACGGC
ATGAAGCAGGAGGAACTGGACAGGATGTCTGTGGCCGCGAAAGAGCGTGT
CGAGAAGGAGTTCTCACTGACAGCTATGGGCGAGAAACTCGAGCAGGAAA
TCGAAGAGATGCTCGGCCAGGAACAGCGGCCGTTCCATGGCTTCCAACAG
CTTCTTACCTTCCTTGCATTGGTGGGAGTGGTGCTTGCCCTCGCTGCTGC
ATTCCTTGTGAAGCTGCTTTGAATGCCCCCCGCCAAAATTACCATCATCC
ACCCCGATCTCGGCATCGGCGGCGCAGAACGTCTAATCATCGACGTGGCC
CTAGCACTGCAATCGCGAGGCCACCCCGTCACAATCTACACCTCGCACCG
GGATAAATCGCATTGTTTTGAGGAGGCGCGCGATGGGACACTTGATGTGC
AGGTGCGCGGGAATACGATCTTCCCGGCGCATGTGGGCGGACGGTTGTTT
GTGCTCATGGCTATCCTGAGGCAATTGCATTTGACGTGGGATTTGTTGTG
TGGGGAGACTACGAGTGGGGATAATGGGGAGGGGGAGGAGGAGGTGTTCA
TTGTGGATCAGATGCCTGCTTGTGTGCCCTTTTTGAAGGTGTTTGGTGGG
AAGAAGAACAGCAGGAAGCAGAGGATTTTGTTCTATTGTCATTTTCCGGA
TCAGTTGCTTGCCAGGCGGGATGAGGGGGGTTCGGTACTGCAGCTGCTTA
AGGGGTTGTATCGCGTGCCGTTTGATTGGTTTGAGGGGTGGGCTGTGAGT
GCGTCGGATAAGGTGGTTGCGAATTCGAGGTTTACGAGAGGGGTTGTTAG
TGGGGTGTTTGGGAGGGAGAAGGTTGGAGATTTGAGTGTCGTTTATCCGT
GTGTTGATACGAAGGCTGGGGATGGGGGTGAGGGGGTGGTGAAGGATGGG
GAGAAGTTGTGGGGTGGGAAGAAGATCCTACTCAGTGTCAATCGGTTTGA
GAGGAAGAAGGACCTGGCGTTGGCGATTCGTGCCTATCATGGTCTTGGGG
AGGAGAAGAGGAAGGGGACTAGATTGGTTGTTGCTGGTGGTTACGATAAT
CGCGTCCAGGAGAATGTGCAGTATCATCGGGAGCTGGATGAATTGGCGAC
TGGGTTGGGCTTGCAGACGGCGACATCTAAGACGGTTATTTCGGCCCTTT
CGATACCCGATTCCATCGATGTGCTCTTCCTGCTGTCCGTGCCGACGGCG
TTCCGGGATACCCTTTTGCTGCAGGCGAAGTTGCTCCTGTATACGCCGAT
TAACGAACACTTCGGGATCGTACCGGTTGAGGCGATGCGGGCTGGCGTGC
CGGTGCTTGCGTCGAATACTGGAGGGCCTTTGGAGACCATTGTGGAGGGC
GAAACGGGCTGGCTCCGTGACGCCAAGGTGGATGCCGATTGGACTGCGGT
GATGGACAAGGTGCTGTACGGCATGAAGCAGGAGGAACTGGACAGGATGT
CTGTGGCCGCGAAAGAGCGTGTCGAGAAGGAGTTCTCACTGACAGCTATG
GGCGAGAAACTCGAGCAGGAAATCGAAGAGATGCTCGGCCAGGAACAGCG
GCCGTTCCATGGCTTCCAACAGCTTCTTACCTTCCTTGCATTGGTGGGAG
TGGTGCTTGCCCTCGCTGCTGCATTCCTTGTGAAGCTGCTTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
Vocabulary: Molecular Function
TermDefinition
GO:0004378GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity
GO:0016757transferase activity, transferring glycosyl groups
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002220ATCC10864_002220Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002220-T1.exon1ATCC10864_002220-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002220-T1.exon2ATCC10864_002220-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002220-T1.cdsATCC10864_002220-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002220-T1ATCC10864_002220-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF13692
InterProIPR027054
PFAMPF00534
InterProIPR001296
Properties
Property NameValue
NoteCAZy:GT4
NoteBUSCO:EOG09263L52
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:649213..650724 +
Powered by Drupal