You are here

Home

ATCC10864_002244-T1, ATCC10864_002244-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002244-T1
Unique NameATCC10864_002244-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:725028..726246-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002244-T1 ID=ATCC10864_002244-T1|Name=ATCC10864_002244-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1219bp|location=Sequence derived from alignment at MCQH01000048:725028..726246- (Aspergillus niger ATCC 10864)
ATGAAGGCAATCGGCGTGGAGAACTACGGTCCTGTTGACCGTCTTGAAGC
TCGGGAAGTCCCGAAGCCGACAGATCTTCAGCCTCGGGATCTTCTGGTTC
GGTAGGATAGCTTCATTTTTCTGATTCCTATGTAGTAGTCACTGAAATTT
ATGGACAGGATCAAAGGTGTTGCTGTGAACCCTGTGGATACGAAAGTACG
GAATGGTACATATGACGACTATCCTGGTAAGATCTAGACCACATTGGCCG
AAACACAGGAGGTGTCGGTTGTTTAACGTCTTGACAGATTACTACGACCG
CGTCCCTCGTCCATTTCAGATCACCGGGTATGATGCCTCAGGCATTGTTG
AGGCTACCGGATCACAATGCTCGCTTTTCAATGTTGGCGATGAAGTATAC
TATTCGGGAAGCCCCATCAGACAGGGATCGAACGCCGAGTATCAATTAGT
AGACGAGAGGAGTGTTGGCCGCAAGCCGAAAAGTCTCGATTTCGTGGAAT
CAGCTGCCATGCCGTTGACGTATATCACGGCGTACGAAGCTCTTGTCGAA
CGACTGGAGATTGAGAAGGAAGAAAAAGCAGCCCTTCTCATCATTAACGG
CGCCGGCGGAGTGGGTGCTATGGCTACACAGATCGCACGTGTTGTGTTGG
ATCTCCCTGTGGTCATTACGACAGCGTCACGACCGGAGACAATCCAATTT
ACGAAAGACATGGGTGCGACTCACGTCGTCAATCACAGAGAGGATGTCGC
CAGTCAGATCGAGAAGCTCAACCTCGAAGTACCGTTGAAGTAAGACGTGT
CTGTGAGAGTCGAAATTAATCGCTAACAACAACCAAGGTATATCTTTATT
ACACACTCGACAGACCAGTACATGGACACGTGTGCTCGGGTTTGCGCGCC
GTTCGGCAAGGTCTGCTCGATCGTCCAAGGCCAAGCCAAGATGTATGGAA
CCGAGTTCATGTCGAAGTCGTTGACGTTCGTCTGGTGTCTGCTTGGAACC
AAGCCATACCATAAGGTGGATGTAGAATCGCACCATCGCATTCTGGAAGA
GCTTACAGATATGATCGATGCGGGCAAGATCAAGTGCCATCTCACGAAGC
GACTGAAATTGACGCTTGACGGCGTGAAGAAGGGACATGAGCTATTGCAG
TCTGGAGGGAGTATAGGCAAAGTCGGGCTAGGTGTAGATGAGCCAGGTCC
TGGAGAGATCTTTACATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000048:725028..726246-

>ATCC10864_002244-T1 ID=ATCC10864_002244-T1|Name=ATCC10864_002244-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4212bp|location=Sequence derived from alignment at MCQH01000048:725028..726246- (Aspergillus niger ATCC 10864)
GTATATCTTTATTACACACTCGACAGACCAGTACATGGACACGTGTGCTC
GGGTTTGCGCGCCGTTCGGCAAGGTCTGCTCGATCGTCCAAGGCCAAGCC
AAGATGTATGGAACCGAGTTCATGTCGAAGTCGTTGACGTTCGTCTGGTG
TCTGCTTGGAACCAAGCCATACCATAAGGTGGATGTAGAATCGCACCATC
GCATTCTGGAAGAGCTTACAGATATGATCGATGCGGGCAAGATCAAGTGC
CATCTCACGAAGCGACTGAAATTGACGCTTGACGGCGTGAAGAAGGGACA
TGAGCTATTGCAGTCTGGAGGGAGTATAGGCAAAGTCGGGCTAGGTGTAG
ATGAGCCAGGTCCTGGAGAGATCTTTACATAGATTACTACGACCGCGTCC
CTCGTCCATTTCAGATCACCGGGTATGATGCCTCAGGCATTGTTGAGGCT
ACCGGATCACAATGCTCGCTTTTCAATGTTGGCGATGAAGTATACTATTC
GGGAAGCCCCATCAGACAGGGATCGAACGCCGAGTATCAATTAGTAGACG
AGAGGAGTGTTGGCCGCAAGCCGAAAAGTCTCGATTTCGTGGAATCAGCT
GCCATGCCGTTGACGTATATCACGGCGTACGAAGCTCTTGTCGAACGACT
GGAGATTGAGAAGGAAGAAAAAGCAGCCCTTCTCATCATTAACGGCGCCG
GCGGAGTGGGTGCTATGGCTACACAGATCGCACGTGTTGTGTTGGATCTC
CCTGTGGTCATTACGACAGCGTCACGACCGGAGACAATCCAATTTACGAA
AGACATGGGTGCGACTCACGTCGTCAATCACAGAGAGGATGTCGCCAGTC
AGATCGAGAAGCTCAACCTCGAAGTACCGTTGAAGATCAAAGGTGTTGCT
GTGAACCCTGTGGATACGAAAGTACGGAATGGTACATATGACGACTATCC
TGATGAAGGCAATCGGCGTGGAGAACTACGGTCCTGTTGACCGTCTTGAA
GCTCGGGAAGTCCCGAAGCCGACAGATCTTCAGCCTCGGGATCTTCTGGT
TCGGTATATCTTTATTACACACTCGACAGACCAGTACATGGACACGTGTG
CTCGGGTTTGCGCGCCGTTCGGCAAGGTCTGCTCGATCGTCCAAGGCCAA
GCCAAGATGTATGGAACCGAGTTCATGTCGAAGTCGTTGACGTTCGTCTG
GTGTCTGCTTGGAACCAAGCCATACCATAAGGTGGATGTAGAATCGCACC
ATCGCATTCTGGAAGAGCTTACAGATATGATCGATGCGGGCAAGATCAAG
TGCCATCTCACGAAGCGACTGAAATTGACGCTTGACGGCGTGAAGAAGGG
ACATGAGCTATTGCAGTCTGGAGGGAGTATAGGCAAAGTCGGGCTAGGTG
TAGATGAGCCAGGTCCTGGAGAGATCTTTACATAGATTACTACGACCGCG
TCCCTCGTCCATTTCAGATCACCGGGTATGATGCCTCAGGCATTGTTGAG
GCTACCGGATCACAATGCTCGCTTTTCAATGTTGGCGATGAAGTATACTA
TTCGGGAAGCCCCATCAGACAGGGATCGAACGCCGAGTATCAATTAGTAG
ACGAGAGGAGTGTTGGCCGCAAGCCGAAAAGTCTCGATTTCGTGGAATCA
GCTGCCATGCCGTTGACGTATATCACGGCGTACGAAGCTCTTGTCGAACG
ACTGGAGATTGAGAAGGAAGAAAAAGCAGCCCTTCTCATCATTAACGGCG
CCGGCGGAGTGGGTGCTATGGCTACACAGATCGCACGTGTTGTGTTGGAT
CTCCCTGTGGTCATTACGACAGCGTCACGACCGGAGACAATCCAATTTAC
GAAAGACATGGGTGCGACTCACGTCGTCAATCACAGAGAGGATGTCGCCA
GTCAGATCGAGAAGCTCAACCTCGAAGTACCGTTGAAGATCAAAGGTGTT
GCTGTGAACCCTGTGGATACGAAAGTACGGAATGGTACATATGACGACTA
TCCTGATGAAGGCAATCGGCGTGGAGAACTACGGTCCTGTTGACCGTCTT
GAAGCTCGGGAAGTCCCGAAGCCGACAGATCTTCAGCCTCGGGATCTTCT
GGTTCGGTATATCTTTATTACACACTCGACAGACCAGTACATGGACACGT
GTGCTCGGGTTTGCGCGCCGTTCGGCAAGGTCTGCTCGATCGTCCAAGGC
CAAGCCAAGATGTATGGAACCGAGTTCATGTCGAAGTCGTTGACGTTCGT
CTGGTGTCTGCTTGGAACCAAGCCATACCATAAGGTGGATGTAGAATCGC
ACCATCGCATTCTGGAAGAGCTTACAGATATGATCGATGCGGGCAAGATC
AAGTGCCATCTCACGAAGCGACTGAAATTGACGCTTGACGGCGTGAAGAA
GGGACATGAGCTATTGCAGTCTGGAGGGAGTATAGGCAAAGTCGGGCTAG
GTGTAGATGAGCCAGGTCCTGGAGAGATCTTTACATAGATTACTACGACC
GCGTCCCTCGTCCATTTCAGATCACCGGGTATGATGCCTCAGGCATTGTT
GAGGCTACCGGATCACAATGCTCGCTTTTCAATGTTGGCGATGAAGTATA
CTATTCGGGAAGCCCCATCAGACAGGGATCGAACGCCGAGTATCAATTAG
TAGACGAGAGGAGTGTTGGCCGCAAGCCGAAAAGTCTCGATTTCGTGGAA
TCAGCTGCCATGCCGTTGACGTATATCACGGCGTACGAAGCTCTTGTCGA
ACGACTGGAGATTGAGAAGGAAGAAAAAGCAGCCCTTCTCATCATTAACG
GCGCCGGCGGAGTGGGTGCTATGGCTACACAGATCGCACGTGTTGTGTTG
GATCTCCCTGTGGTCATTACGACAGCGTCACGACCGGAGACAATCCAATT
TACGAAAGACATGGGTGCGACTCACGTCGTCAATCACAGAGAGGATGTCG
CCAGTCAGATCGAGAAGCTCAACCTCGAAGTACCGTTGAAGATCAAAGGT
GTTGCTGTGAACCCTGTGGATACGAAAGTACGGAATGGTACATATGACGA
CTATCCTGATGAAGGCAATCGGCGTGGAGAACTACGGTCCTGTTGACCGT
CTTGAAGCTCGGGAAGTCCCGAAGCCGACAGATCTTCAGCCTCGGGATCT
TCTGGTTCGGTATATCTTTATTACACACTCGACAGACCAGTACATGGACA
CGTGTGCTCGGGTTTGCGCGCCGTTCGGCAAGGTCTGCTCGATCGTCCAA
GGCCAAGCCAAGATGTATGGAACCGAGTTCATGTCGAAGTCGTTGACGTT
CGTCTGGTGTCTGCTTGGAACCAAGCCATACCATAAGGTGGATGTAGAAT
CGCACCATCGCATTCTGGAAGAGCTTACAGATATGATCGATGCGGGCAAG
ATCAAGTGCCATCTCACGAAGCGACTGAAATTGACGCTTGACGGCGTGAA
GAAGGGACATGAGCTATTGCAGTCTGGAGGGAGTATAGGCAAAGTCGGGC
TAGGTGTAGATGAGCCAGGTCCTGGAGAGATCTTTACATAGATTACTACG
ACCGCGTCCCTCGTCCATTTCAGATCACCGGGTATGATGCCTCAGGCATT
GTTGAGGCTACCGGATCACAATGCTCGCTTTTCAATGTTGGCGATGAAGT
ATACTATTCGGGAAGCCCCATCAGACAGGGATCGAACGCCGAGTATCAAT
TAGTAGACGAGAGGAGTGTTGGCCGCAAGCCGAAAAGTCTCGATTTCGTG
GAATCAGCTGCCATGCCGTTGACGTATATCACGGCGTACGAAGCTCTTGT
CGAACGACTGGAGATTGAGAAGGAAGAAAAAGCAGCCCTTCTCATCATTA
ACGGCGCCGGCGGAGTGGGTGCTATGGCTACACAGATCGCACGTGTTGTG
TTGGATCTCCCTGTGGTCATTACGACAGCGTCACGACCGGAGACAATCCA
ATTTACGAAAGACATGGGTGCGACTCACGTCGTCAATCACAGAGAGGATG
TCGCCAGTCAGATCGAGAAGCTCAACCTCGAAGTACCGTTGAAGATCAAA
GGTGTTGCTGTGAACCCTGTGGATACGAAAGTACGGAATGGTACATATGA
CGACTATCCTGATGAAGGCAATCGGCGTGGAGAACTACGGTCCTGTTGAC
CGTCTTGAAGCTCGGGAAGTCCCGAAGCCGACAGATCTTCAGCCTCGGGA
TCTTCTGGTTCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002244ATCC10864_002244Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002244-T1ATCC10864_002244-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002244-T1.cdsATCC10864_002244-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002244-T1.exon4ATCC10864_002244-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_002244-T1.exon3ATCC10864_002244-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002244-T1.exon2ATCC10864_002244-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002244-T1.exon1ATCC10864_002244-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00107
PFAMPF08240
PFAMPF13602
InterProIPR036291
InterProIPR013154
InterProIPR011032
InterProIPR020843
InterProIPR014182
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:725028..726246 -
Powered by Drupal