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ATCC10864_002257-T1, ATCC10864_002257-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002257-T1
Unique NameATCC10864_002257-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:761914..762650+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002257-T1 ID=ATCC10864_002257-T1|Name=ATCC10864_002257-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=737bp|location=Sequence derived from alignment at MCQH01000048:761914..762650+ (Aspergillus niger ATCC 10864)
ATGGGTGTGCAAAAGAAGACTCGCAAGTTCGCGCAGGTATGTTCCTGTGG
CTTCGCAGCAGATACGGAACGGAAACTGATCCTACTGAATCTATAGATGA
AGCGCGCCATCAAAGCCCGTGATGAGCGACTGAAGAAGCCGGAAGCGAAA
AAGGAGACGCCCAAGGAGGATCAGCTGACTCGACAAGTCACCCAAGCTCC
TTCGAACATGTTCTTTGCCGCGAACACTGCCCTTGGCCCTCCCTACCACG
TGCTGGTCGATACCAACTTTGTTTCCCACGCCATTCGAGCCAAGCAGGAC
CTACTTACTTCGATGATGGACTTGTGAGTTGGAACACTATTTGGACTTTG
GATATATGCTAAGACTAGCTGCAGGCTGTACGCGAAGTGTATTCCGACCT
TCTCAGACTGCACTATCGCGGAATTGGAAAAGCTGGGTGACAAGTACCGC
CTCGCACTTCGGGTTGCCAAAGACCCTCGGTGGTCTAGGGTTAAGTGCTC
TCACAAGGGTACCTATGCAGATGACTGTATCGTGGATCGGGTGAGTGGTT
ACTCAAATTTTTCTTGGGTAGCACAGCGCGCTAACGACTCTTGTAGGTGA
CCAAGCATAGAATTTACATTGTGGCGACCAATGATCAAGATCTGTGTCGC
CGCCTGCGCAAGATTCCTGGTGTTCCGATCATGAAGGTTGCTAGGGGCAA
ATTCACCATCGAGAAGTTGCCCGATGCTTTGGATTAA
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Coding sequence (CDS) from alignment at MCQH01000048:761914..762650+

>ATCC10864_002257-T1 ID=ATCC10864_002257-T1|Name=ATCC10864_002257-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2280bp|location=Sequence derived from alignment at MCQH01000048:761914..762650+ (Aspergillus niger ATCC 10864)
ATGGGTGTGCAAAAGAAGACTCGCAAGTTCGCGCAGATGAAGCGCGCCAT
CAAAGCCCGTGATGAGCGACTGAAGAAGCCGGAAGCGAAAAAGGAGACGC
CCAAGGAGGATCAGCTGACTCGACAAGTCACCCAAGCTCCTTCGAACATG
TTCTTTGCCGCGAACACTGCCCTTGGCCCTCCCTACCACGTGCTGGTCGA
TACCAACTTTGTTTCCCACGCCATTCGAGCCAAGCAGGACCTACTTACTT
CGATGATGGACTTGCTGTACGCGAAGTGTATTCCGACCTTCTCAGACTGC
ACTATCGCGGAATTGGAAAAGCTGGGTGACAAGTACCGCCTCGCACTTCG
GGTTGCCAAAGACCCTCGGTGGTCTAGGGTTAAGTGCTCTCACAAGGGTA
CCTATGCAGATGACTGTATCGTGGATCGGGTGACCAAGCATAGAATTTAC
ATTGTGGCGACCAATGATCAAGATCTGTGTCGCCGCCTGCGCAAGATTCC
TGGTGTTCCGATCATGAAGGTTGCTAGGGGCAAATTCACCATCGAGAAGT
TGCCCGATGCTTTGGATTAAATGGGTGTGCAAAAGAAGACTCGCAAGTTC
GCGCAGATGAAGCGCGCCATCAAAGCCCGTGATGAGCGACTGAAGAAGCC
GGAAGCGAAAAAGGAGACGCCCAAGGAGGATCAGCTGACTCGACAAGTCA
CCCAAGCTCCTTCGAACATGTTCTTTGCCGCGAACACTGCCCTTGGCCCT
CCCTACCACGTGCTGGTCGATACCAACTTTGTTTCCCACGCCATTCGAGC
CAAGCAGGACCTACTTACTTCGATGATGGACTTGCTGTACGCGAAGTGTA
TTCCGACCTTCTCAGACTGCACTATCGCGGAATTGGAAAAGCTGGGTGAC
AAGTACCGCCTCGCACTTCGGGTTGCCAAAGACCCTCGGTGGTCTAGGGT
TAAGTGCTCTCACAAGGGTACCTATGCAGATGACTGTATCGTGGATCGGG
TGACCAAGCATAGAATTTACATTGTGGCGACCAATGATCAAGATCTGTGT
CGCCGCCTGCGCAAGATTCCTGGTGTTCCGATCATGAAGGTTGCTAGGGG
CAAATTCACCATCGAGAAGTTGCCCGATGCTTTGGATTAAATGGGTGTGC
AAAAGAAGACTCGCAAGTTCGCGCAGATGAAGCGCGCCATCAAAGCCCGT
GATGAGCGACTGAAGAAGCCGGAAGCGAAAAAGGAGACGCCCAAGGAGGA
TCAGCTGACTCGACAAGTCACCCAAGCTCCTTCGAACATGTTCTTTGCCG
CGAACACTGCCCTTGGCCCTCCCTACCACGTGCTGGTCGATACCAACTTT
GTTTCCCACGCCATTCGAGCCAAGCAGGACCTACTTACTTCGATGATGGA
CTTGCTGTACGCGAAGTGTATTCCGACCTTCTCAGACTGCACTATCGCGG
AATTGGAAAAGCTGGGTGACAAGTACCGCCTCGCACTTCGGGTTGCCAAA
GACCCTCGGTGGTCTAGGGTTAAGTGCTCTCACAAGGGTACCTATGCAGA
TGACTGTATCGTGGATCGGGTGACCAAGCATAGAATTTACATTGTGGCGA
CCAATGATCAAGATCTGTGTCGCCGCCTGCGCAAGATTCCTGGTGTTCCG
ATCATGAAGGTTGCTAGGGGCAAATTCACCATCGAGAAGTTGCCCGATGC
TTTGGATTAAATGGGTGTGCAAAAGAAGACTCGCAAGTTCGCGCAGATGA
AGCGCGCCATCAAAGCCCGTGATGAGCGACTGAAGAAGCCGGAAGCGAAA
AAGGAGACGCCCAAGGAGGATCAGCTGACTCGACAAGTCACCCAAGCTCC
TTCGAACATGTTCTTTGCCGCGAACACTGCCCTTGGCCCTCCCTACCACG
TGCTGGTCGATACCAACTTTGTTTCCCACGCCATTCGAGCCAAGCAGGAC
CTACTTACTTCGATGATGGACTTGCTGTACGCGAAGTGTATTCCGACCTT
CTCAGACTGCACTATCGCGGAATTGGAAAAGCTGGGTGACAAGTACCGCC
TCGCACTTCGGGTTGCCAAAGACCCTCGGTGGTCTAGGGTTAAGTGCTCT
CACAAGGGTACCTATGCAGATGACTGTATCGTGGATCGGGTGACCAAGCA
TAGAATTTACATTGTGGCGACCAATGATCAAGATCTGTGTCGCCGCCTGC
GCAAGATTCCTGGTGTTCCGATCATGAAGGTTGCTAGGGGCAAATTCACC
ATCGAGAAGTTGCCCGATGCTTTGGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FCF1ATCC10864_002257Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002257-T1.exon1ATCC10864_002257-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002257-T1.exon2ATCC10864_002257-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002257-T1.exon3ATCC10864_002257-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002257-T1.exon4ATCC10864_002257-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002257-T1.cdsATCC10864_002257-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002257-T1ATCC10864_002257-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR006984
PFAMPF18477
InterProIPR002716
InterProIPR029060
PFAMPF04900
InterProIPR037503
Properties
Property NameValue
NoteBUSCO:EOG09264SET
ProductrRNA-processing protein fcf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:761914..762650 +
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