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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:842854..844513+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002286-T1 ID=ATCC10864_002286-T1|Name=ATCC10864_002286-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1660bp|location=Sequence derived from alignment at MCQH01000048:842854..844513+ (Aspergillus niger ATCC 10864)
ATGCTCTGCGCAAGTAAGTCGTGCAATCAATCGCTCTTGCCAGTCCGATT
ACTGATAACTGACGTGCAACAGTTTCGGGAGAAGCACCGCAAGTGCCCGT
CGTCTCGCCCAAGAGCGGTATGTCTCAACCTCGAAAGCCTCAATGCGACG
TAATGCGGCTAATGCTCGACTAGGCAGCGTCTTTGAGAAGCGACTGATCG
AAGCCTACATCGCGGAGAATGGAAAGGACCCCGTGAATGGAGAAGAGCTC
TCCACAGACGACCTCATTGATGTCAAATCCCAGCGCGTCGTCCGCCCCAG
ACCTCCCACCCTCACATCCATTCCTTCGTTGCTCAGTGTTTTCCAAGAAG
AATGGGATGCCCTGGCTCTCGAGACCTACACATTGCGACAGACCTTGGCG
CAGACCCGCCAGGAATTGAGCTCCGCGCTCTACCAGCACGATGCCGCCGT
TCGCGTGATTGCTCGTTTGACAAAGGAGAGAGACGAGGCCCGTGATGCCC
TATCCAAGGTCACCGTCGGTGCCAGGAGTGCTGCTGCCTCCGGTGGTGAA
GCTATGCAGGTTGATTCGACCGGTCTGCCCGAGGCCGTTCTGGCACGTGT
TGAGAGCACACAGGCATCGTAAGTTGCTATGTATAGGATTCCACTGTGTT
TGGCATATCTAACAACATACAGGCTGTCTAAGACACGTCGTAAGCGCCCG
GTTCCGGAAGGCTGGGCTACGGGTGATGCCATCTCCACATTCAAGCCTAC
GGAGAGCTCCAACCCTCTTTACCCCGGCAGCAAGGCATTCGCCGTCAACT
CGTCGGGAGAGCTGGCACTCATCGGCGGTGCGGACGGTGCCGTTGGCATC
TATTCCATTCCCCAGAAGCAGGTTGTTCAGAATCTGCAGGCAAACGGACC
AGTTACCGATGCCGCTTGGGCAGGCGAGAAGGCTATTGTGGCATCGTCTA
CGGGCTCCGTGAAGGTCTTCGAGCACGGCAACGAGGTCGCCAACTTCAAC
TCCCATGCTGGAGCCGCAACGGCGCTTGCCGTGCATGCTACCGGTGACAT
TGTTGCCTCGGTTGGCGCTGATAAGAGCTATGTTCTGTATGACCTTACGA
CGAACTCGGTAATCACTCAGATTTTCAGTGACGCATGTGAGTAGCCCGAT
GATGGATTATATATCCGGATATGACTGACTTTTCCTTCCTCTATAGCTCT
TCTCTCGGTCAAGATTCACCCTGATGGTCATTTGGTTGCTGCTGGTGGCG
TGGACGGGCAAATCAAGATCTTCGATATTAAGACTGGCGCGTCCGCTGCC
ACATTCACCATGTCTGGGCCTGTGAAGTCTCTTTTCTTCTCCGAGAACGG
TGTTTTCCTGGCCGCGGTTACCGAGAACTCGACCACTGTGTCCATTTGGG
ATCTCCGTAGCGCACAGGAGAGCAAGGTTCTGGAGACGGGCAGTCAGGTT
GACTCGATTAACTGGGATTACACTGGACAGTTCCTTCTGACCGCAGGACC
TAGTGGCTTGACCGTGCATCAATACACCAAGGCATCCAAGTCGTGGTCCG
AGCCCTTGCGGAGTGCGGTGCCCGCGGTTGCGGCGGCTTGGGGCTCTGCC
GCCCAGGCTATCGTGGCGTTGAATAGCGAGGGAGGCGTGACGGAGCTGAC
GGCACAGTAA back to topCoding sequence (CDS) from alignment at MCQH01000048:842854..844513+ >ATCC10864_002286-T1 ID=ATCC10864_002286-T1|Name=ATCC10864_002286-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7155bp|location=Sequence derived from alignment at MCQH01000048:842854..844513+ (Aspergillus niger ATCC 10864)
ATGCTCTGCGCAATTTCGGGAGAAGCACCGCAAGTGCCCGTCGTCTCGCC
CAAGAGCGGCAGCGTCTTTGAGAAGCGACTGATCGAAGCCTACATCGCGG
AGAATGGAAAGGACCCCGTGAATGGAGAAGAGCTCTCCACAGACGACCTC
ATTGATGTCAAATCCCAGCGCGTCGTCCGCCCCAGACCTCCCACCCTCAC
ATCCATTCCTTCGTTGCTCAGTGTTTTCCAAGAAGAATGGGATGCCCTGG
CTCTCGAGACCTACACATTGCGACAGACCTTGGCGCAGACCCGCCAGGAA
TTGAGCTCCGCGCTCTACCAGCACGATGCCGCCGTTCGCGTGATTGCTCG
TTTGACAAAGGAGAGAGACGAGGCCCGTGATGCCCTATCCAAGGTCACCG
TCGGTGCCAGGAGTGCTGCTGCCTCCGGTGGTGAAGCTATGCAGGTTGAT
TCGACCGGTCTGCCCGAGGCCGTTCTGGCACGTGTTGAGAGCACACAGGC
ATCGCTGTCTAAGACACGTCGTAAGCGCCCGGTTCCGGAAGGCTGGGCTA
CGGGTGATGCCATCTCCACATTCAAGCCTACGGAGAGCTCCAACCCTCTT
TACCCCGGCAGCAAGGCATTCGCCGTCAACTCGTCGGGAGAGCTGGCACT
CATCGGCGGTGCGGACGGTGCCGTTGGCATCTATTCCATTCCCCAGAAGC
AGGTTGTTCAGAATCTGCAGGCAAACGGACCAGTTACCGATGCCGCTTGG
GCAGGCGAGAAGGCTATTGTGGCATCGTCTACGGGCTCCGTGAAGGTCTT
CGAGCACGGCAACGAGGTCGCCAACTTCAACTCCCATGCTGGAGCCGCAA
CGGCGCTTGCCGTGCATGCTACCGGTGACATTGTTGCCTCGGTTGGCGCT
GATAAGAGCTATGTTCTGTATGACCTTACGACGAACTCGGTAATCACTCA
GATTTTCAGTGACGCATCTCTTCTCTCGGTCAAGATTCACCCTGATGGTC
ATTTGGTTGCTGCTGGTGGCGTGGACGGGCAAATCAAGATCTTCGATATT
AAGACTGGCGCGTCCGCTGCCACATTCACCATGTCTGGGCCTGTGAAGTC
TCTTTTCTTCTCCGAGAACGGTGTTTTCCTGGCCGCGGTTACCGAGAACT
CGACCACTGTGTCCATTTGGGATCTCCGTAGCGCACAGGAGAGCAAGGTT
CTGGAGACGGGCAGTCAGGTTGACTCGATTAACTGGGATTACACTGGACA
GTTCCTTCTGACCGCAGGACCTAGTGGCTTGACCGTGCATCAATACACCA
AGGCATCCAAGTCGTGGTCCGAGCCCTTGCGGAGTGCGGTGCCCGCGGTT
GCGGCGGCTTGGGGCTCTGCCGCCCAGGCTATCGTGGCGTTGAATAGCGA
GGGAGGCGTGACGGAGCTGACGGCACAGTAAATGCTCTGCGCAATTTCGG
GAGAAGCACCGCAAGTGCCCGTCGTCTCGCCCAAGAGCGGCAGCGTCTTT
GAGAAGCGACTGATCGAAGCCTACATCGCGGAGAATGGAAAGGACCCCGT
GAATGGAGAAGAGCTCTCCACAGACGACCTCATTGATGTCAAATCCCAGC
GCGTCGTCCGCCCCAGACCTCCCACCCTCACATCCATTCCTTCGTTGCTC
AGTGTTTTCCAAGAAGAATGGGATGCCCTGGCTCTCGAGACCTACACATT
GCGACAGACCTTGGCGCAGACCCGCCAGGAATTGAGCTCCGCGCTCTACC
AGCACGATGCCGCCGTTCGCGTGATTGCTCGTTTGACAAAGGAGAGAGAC
GAGGCCCGTGATGCCCTATCCAAGGTCACCGTCGGTGCCAGGAGTGCTGC
TGCCTCCGGTGGTGAAGCTATGCAGGTTGATTCGACCGGTCTGCCCGAGG
CCGTTCTGGCACGTGTTGAGAGCACACAGGCATCGCTGTCTAAGACACGT
CGTAAGCGCCCGGTTCCGGAAGGCTGGGCTACGGGTGATGCCATCTCCAC
ATTCAAGCCTACGGAGAGCTCCAACCCTCTTTACCCCGGCAGCAAGGCAT
TCGCCGTCAACTCGTCGGGAGAGCTGGCACTCATCGGCGGTGCGGACGGT
GCCGTTGGCATCTATTCCATTCCCCAGAAGCAGGTTGTTCAGAATCTGCA
GGCAAACGGACCAGTTACCGATGCCGCTTGGGCAGGCGAGAAGGCTATTG
TGGCATCGTCTACGGGCTCCGTGAAGGTCTTCGAGCACGGCAACGAGGTC
GCCAACTTCAACTCCCATGCTGGAGCCGCAACGGCGCTTGCCGTGCATGC
TACCGGTGACATTGTTGCCTCGGTTGGCGCTGATAAGAGCTATGTTCTGT
ATGACCTTACGACGAACTCGGTAATCACTCAGATTTTCAGTGACGCATCT
CTTCTCTCGGTCAAGATTCACCCTGATGGTCATTTGGTTGCTGCTGGTGG
CGTGGACGGGCAAATCAAGATCTTCGATATTAAGACTGGCGCGTCCGCTG
CCACATTCACCATGTCTGGGCCTGTGAAGTCTCTTTTCTTCTCCGAGAAC
GGTGTTTTCCTGGCCGCGGTTACCGAGAACTCGACCACTGTGTCCATTTG
GGATCTCCGTAGCGCACAGGAGAGCAAGGTTCTGGAGACGGGCAGTCAGG
TTGACTCGATTAACTGGGATTACACTGGACAGTTCCTTCTGACCGCAGGA
CCTAGTGGCTTGACCGTGCATCAATACACCAAGGCATCCAAGTCGTGGTC
CGAGCCCTTGCGGAGTGCGGTGCCCGCGGTTGCGGCGGCTTGGGGCTCTG
CCGCCCAGGCTATCGTGGCGTTGAATAGCGAGGGAGGCGTGACGGAGCTG
ACGGCACAGTAAATGCTCTGCGCAATTTCGGGAGAAGCACCGCAAGTGCC
CGTCGTCTCGCCCAAGAGCGGCAGCGTCTTTGAGAAGCGACTGATCGAAG
CCTACATCGCGGAGAATGGAAAGGACCCCGTGAATGGAGAAGAGCTCTCC
ACAGACGACCTCATTGATGTCAAATCCCAGCGCGTCGTCCGCCCCAGACC
TCCCACCCTCACATCCATTCCTTCGTTGCTCAGTGTTTTCCAAGAAGAAT
GGGATGCCCTGGCTCTCGAGACCTACACATTGCGACAGACCTTGGCGCAG
ACCCGCCAGGAATTGAGCTCCGCGCTCTACCAGCACGATGCCGCCGTTCG
CGTGATTGCTCGTTTGACAAAGGAGAGAGACGAGGCCCGTGATGCCCTAT
CCAAGGTCACCGTCGGTGCCAGGAGTGCTGCTGCCTCCGGTGGTGAAGCT
ATGCAGGTTGATTCGACCGGTCTGCCCGAGGCCGTTCTGGCACGTGTTGA
GAGCACACAGGCATCGCTGTCTAAGACACGTCGTAAGCGCCCGGTTCCGG
AAGGCTGGGCTACGGGTGATGCCATCTCCACATTCAAGCCTACGGAGAGC
TCCAACCCTCTTTACCCCGGCAGCAAGGCATTCGCCGTCAACTCGTCGGG
AGAGCTGGCACTCATCGGCGGTGCGGACGGTGCCGTTGGCATCTATTCCA
TTCCCCAGAAGCAGGTTGTTCAGAATCTGCAGGCAAACGGACCAGTTACC
GATGCCGCTTGGGCAGGCGAGAAGGCTATTGTGGCATCGTCTACGGGCTC
CGTGAAGGTCTTCGAGCACGGCAACGAGGTCGCCAACTTCAACTCCCATG
CTGGAGCCGCAACGGCGCTTGCCGTGCATGCTACCGGTGACATTGTTGCC
TCGGTTGGCGCTGATAAGAGCTATGTTCTGTATGACCTTACGACGAACTC
GGTAATCACTCAGATTTTCAGTGACGCATCTCTTCTCTCGGTCAAGATTC
ACCCTGATGGTCATTTGGTTGCTGCTGGTGGCGTGGACGGGCAAATCAAG
ATCTTCGATATTAAGACTGGCGCGTCCGCTGCCACATTCACCATGTCTGG
GCCTGTGAAGTCTCTTTTCTTCTCCGAGAACGGTGTTTTCCTGGCCGCGG
TTACCGAGAACTCGACCACTGTGTCCATTTGGGATCTCCGTAGCGCACAG
GAGAGCAAGGTTCTGGAGACGGGCAGTCAGGTTGACTCGATTAACTGGGA
TTACACTGGACAGTTCCTTCTGACCGCAGGACCTAGTGGCTTGACCGTGC
ATCAATACACCAAGGCATCCAAGTCGTGGTCCGAGCCCTTGCGGAGTGCG
GTGCCCGCGGTTGCGGCGGCTTGGGGCTCTGCCGCCCAGGCTATCGTGGC
GTTGAATAGCGAGGGAGGCGTGACGGAGCTGACGGCACAGTAAATGCTCT
GCGCAATTTCGGGAGAAGCACCGCAAGTGCCCGTCGTCTCGCCCAAGAGC
GGCAGCGTCTTTGAGAAGCGACTGATCGAAGCCTACATCGCGGAGAATGG
AAAGGACCCCGTGAATGGAGAAGAGCTCTCCACAGACGACCTCATTGATG
TCAAATCCCAGCGCGTCGTCCGCCCCAGACCTCCCACCCTCACATCCATT
CCTTCGTTGCTCAGTGTTTTCCAAGAAGAATGGGATGCCCTGGCTCTCGA
GACCTACACATTGCGACAGACCTTGGCGCAGACCCGCCAGGAATTGAGCT
CCGCGCTCTACCAGCACGATGCCGCCGTTCGCGTGATTGCTCGTTTGACA
AAGGAGAGAGACGAGGCCCGTGATGCCCTATCCAAGGTCACCGTCGGTGC
CAGGAGTGCTGCTGCCTCCGGTGGTGAAGCTATGCAGGTTGATTCGACCG
GTCTGCCCGAGGCCGTTCTGGCACGTGTTGAGAGCACACAGGCATCGCTG
TCTAAGACACGTCGTAAGCGCCCGGTTCCGGAAGGCTGGGCTACGGGTGA
TGCCATCTCCACATTCAAGCCTACGGAGAGCTCCAACCCTCTTTACCCCG
GCAGCAAGGCATTCGCCGTCAACTCGTCGGGAGAGCTGGCACTCATCGGC
GGTGCGGACGGTGCCGTTGGCATCTATTCCATTCCCCAGAAGCAGGTTGT
TCAGAATCTGCAGGCAAACGGACCAGTTACCGATGCCGCTTGGGCAGGCG
AGAAGGCTATTGTGGCATCGTCTACGGGCTCCGTGAAGGTCTTCGAGCAC
GGCAACGAGGTCGCCAACTTCAACTCCCATGCTGGAGCCGCAACGGCGCT
TGCCGTGCATGCTACCGGTGACATTGTTGCCTCGGTTGGCGCTGATAAGA
GCTATGTTCTGTATGACCTTACGACGAACTCGGTAATCACTCAGATTTTC
AGTGACGCATCTCTTCTCTCGGTCAAGATTCACCCTGATGGTCATTTGGT
TGCTGCTGGTGGCGTGGACGGGCAAATCAAGATCTTCGATATTAAGACTG
GCGCGTCCGCTGCCACATTCACCATGTCTGGGCCTGTGAAGTCTCTTTTC
TTCTCCGAGAACGGTGTTTTCCTGGCCGCGGTTACCGAGAACTCGACCAC
TGTGTCCATTTGGGATCTCCGTAGCGCACAGGAGAGCAAGGTTCTGGAGA
CGGGCAGTCAGGTTGACTCGATTAACTGGGATTACACTGGACAGTTCCTT
CTGACCGCAGGACCTAGTGGCTTGACCGTGCATCAATACACCAAGGCATC
CAAGTCGTGGTCCGAGCCCTTGCGGAGTGCGGTGCCCGCGGTTGCGGCGG
CTTGGGGCTCTGCCGCCCAGGCTATCGTGGCGTTGAATAGCGAGGGAGGC
GTGACGGAGCTGACGGCACAGTAAATGCTCTGCGCAATTTCGGGAGAAGC
ACCGCAAGTGCCCGTCGTCTCGCCCAAGAGCGGCAGCGTCTTTGAGAAGC
GACTGATCGAAGCCTACATCGCGGAGAATGGAAAGGACCCCGTGAATGGA
GAAGAGCTCTCCACAGACGACCTCATTGATGTCAAATCCCAGCGCGTCGT
CCGCCCCAGACCTCCCACCCTCACATCCATTCCTTCGTTGCTCAGTGTTT
TCCAAGAAGAATGGGATGCCCTGGCTCTCGAGACCTACACATTGCGACAG
ACCTTGGCGCAGACCCGCCAGGAATTGAGCTCCGCGCTCTACCAGCACGA
TGCCGCCGTTCGCGTGATTGCTCGTTTGACAAAGGAGAGAGACGAGGCCC
GTGATGCCCTATCCAAGGTCACCGTCGGTGCCAGGAGTGCTGCTGCCTCC
GGTGGTGAAGCTATGCAGGTTGATTCGACCGGTCTGCCCGAGGCCGTTCT
GGCACGTGTTGAGAGCACACAGGCATCGCTGTCTAAGACACGTCGTAAGC
GCCCGGTTCCGGAAGGCTGGGCTACGGGTGATGCCATCTCCACATTCAAG
CCTACGGAGAGCTCCAACCCTCTTTACCCCGGCAGCAAGGCATTCGCCGT
CAACTCGTCGGGAGAGCTGGCACTCATCGGCGGTGCGGACGGTGCCGTTG
GCATCTATTCCATTCCCCAGAAGCAGGTTGTTCAGAATCTGCAGGCAAAC
GGACCAGTTACCGATGCCGCTTGGGCAGGCGAGAAGGCTATTGTGGCATC
GTCTACGGGCTCCGTGAAGGTCTTCGAGCACGGCAACGAGGTCGCCAACT
TCAACTCCCATGCTGGAGCCGCAACGGCGCTTGCCGTGCATGCTACCGGT
GACATTGTTGCCTCGGTTGGCGCTGATAAGAGCTATGTTCTGTATGACCT
TACGACGAACTCGGTAATCACTCAGATTTTCAGTGACGCATCTCTTCTCT
CGGTCAAGATTCACCCTGATGGTCATTTGGTTGCTGCTGGTGGCGTGGAC
GGGCAAATCAAGATCTTCGATATTAAGACTGGCGCGTCCGCTGCCACATT
CACCATGTCTGGGCCTGTGAAGTCTCTTTTCTTCTCCGAGAACGGTGTTT
TCCTGGCCGCGGTTACCGAGAACTCGACCACTGTGTCCATTTGGGATCTC
CGTAGCGCACAGGAGAGCAAGGTTCTGGAGACGGGCAGTCAGGTTGACTC
GATTAACTGGGATTACACTGGACAGTTCCTTCTGACCGCAGGACCTAGTG
GCTTGACCGTGCATCAATACACCAAGGCATCCAAGTCGTGGTCCGAGCCC
TTGCGGAGTGCGGTGCCCGCGGTTGCGGCGGCTTGGGGCTCTGCCGCCCA
GGCTATCGTGGCGTTGAATAGCGAGGGAGGCGTGACGGAGCTGACGGCAC
AGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000974 | Prp19 complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
| GO:0016567 | protein ubiquitination |
| GO:0000398 | mRNA splicing, via spliceosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004842 | ubiquitin-protein transferase activity |
| GO:0005515 | protein binding |
| GO:0061630 | ubiquitin protein ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF08606 |
| InterPro | IPR015943 |
| InterPro | IPR003613 |
| InterPro | IPR017986 |
| InterPro | IPR038959 |
| InterPro | IPR013915 |
| InterPro | IPR001680 |
| InterPro | IPR013083 |
| InterPro | IPR036322 |
| PFAM | PF00400 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092642I5 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:842854..844513 + |
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