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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:847843..849230+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002289-T1 ID=ATCC10864_002289-T1|Name=ATCC10864_002289-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1388bp|location=Sequence derived from alignment at MCQH01000048:847843..849230+ (Aspergillus niger ATCC 10864)
ATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCC
GCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGA
AGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTAT
GAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACT
GCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAG
GCCTCGAGACCTGTATGATCATCGCATCTATTCTGGGCTATATCAGTGTC
AATACTGATGATTTGCTGCAGATGAACCATCCAACGACCAACAAGCACGA
GGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCAA
GGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGGG
TACAGTCACAGGCCGAGCGGGCTTGATGGGTTACACGCATCACTGACGTC
TCCCAGATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAA
ACCACACAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGA
AAGGTATTGCTACAGATCTAGTCGCCTGTCACTCTGGATTCACACTGGTA
TCGAATCCCCGTACTTCATTGATGCTAACCTAGTTTTCTTTTGTCACGAA
TTCAGCTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCGTG
TCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGT
CGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTC
TCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCT
ATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGA
GGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATA
CCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACG
CCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCT
GGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAG
AGAACCCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGACC
GTGATCGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATAGT
TATCGCTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGACAG
GTACGGAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGATG
ATTCGTATGATGACCCCCGTGCGAAGAGAAGATACTGA back to topCoding sequence (CDS) from alignment at MCQH01000048:847843..849230+ >ATCC10864_002289-T1 ID=ATCC10864_002289-T1|Name=ATCC10864_002289-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4680bp|location=Sequence derived from alignment at MCQH01000048:847843..849230+ (Aspergillus niger ATCC 10864)
ATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCC
GCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGA
AGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTAT
GAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACT
GCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAG
GCCTCGAGACCTATGAACCATCCAACGACCAACAAGCACGAGGCGACCCG
TTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCAAGGAATCGGA
CCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGGATTCGCATCG
TGAAAGACACCGTAACGCCAAAGGGCTCGAAGAAACCACACAGGGGATAT
GCTTTTATTGTCTATGAGCGCGAAAAGGATATGAAAGCTGCCTACAAGGA
AACGGATGGTATCCGCATCAAGGACCGCCGTGTCTTGGTAGACGTCGAGC
GCGGTCGTACAGTCAAGGGATGGAAGCCTCGTCGCTTTGGTGGTGGTCTT
GGAGGTCGTGGTTACACCAAGGCTTTGCCGTCTCGACCTATCGGCCCTGG
CTCTTTCAACGCCCCCTCTGGTCCCGGCGGCTATGGTGGTGGATTCCGGG
GTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGAGGATTCCGCGGTGACCGT
GGATTTGGTGGGCCCCGCGGGGGTGTTGGATACCAAGGTGGTCGCAACGG
ATTCGGTGGAGGCGGACAGGCTCCCCCCAACGCCCCTTCAGGTCCGGGAG
GCGGACGCAGCGGTGGGTTTGGTGGTCCCCCTGGCGGCGGCAGATTTGAG
CGTGAACCCCGGGGCGCCACTGGCAGCAACAGAGAACCCATCAGGCCCCG
GGACGGGTTTGGCGACCGCGATCGTCGAGACCGTGATCGGGACCGCGACG
GTGACCGTCACCGGGACCGTGATCGGGATAGTTATCGCTACCGTGACCGC
GACCGTGAACGCGACCGCGATCGTGGTGACAGGTACGGAGGCCGGGGCGA
CGACTACGGGCGGAAGCGATACCATGAAGATGATTCGTATGATGACCCCC
GTGCGAAGAGAAGATACTGAATGACGGACAAGCTCCCCCCTCCGCTTCTG
GCGCTCTTCCAACCTCGCCCGCCTCTGCGTTATGTCACCCCCATCAACCG
TGCCCCAGAAGACTGCAAGAAGAGTAGCATCGGTGGTATTGCGCAGTTCC
TTCCTGAGGTGAAGAAGTATGAGGAAGAGATCCCATATACGCCTACGGAA
AGCTGGATCCAGCGCAAACTGCGCCAGAAAGTGGAGAAGAAAGAGAACAT
TAACAAGCAATTGACGGAAGGCCTCGAGACCTATGAACCATCCAACGACC
AACAAGCACGAGGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGC
TACGATGTCAAGGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCC
TATTGAACGGATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGA
AGAAACCACACAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGAT
ATGAAAGCTGCCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCG
TGTCTTGGTAGACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTC
GTCGCTTTGGTGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCG
TCTCGACCTATCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGG
CTATGGTGGTGGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGG
GAGGATTCCGCGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGA
TACCAAGGTGGTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAA
CGCCCCTTCAGGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCC
CTGGCGGCGGCAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAAC
AGAGAACCCATCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGA
CCGTGATCGGGACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATA
GTTATCGCTACCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGAC
AGGTACGGAGGCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGA
TGATTCGTATGATGACCCCCGTGCGAAGAGAAGATACTGAATGACGGACA
AGCTCCCCCCTCCGCTTCTGGCGCTCTTCCAACCTCGCCCGCCTCTGCGT
TATGTCACCCCCATCAACCGTGCCCCAGAAGACTGCAAGAAGAGTAGCAT
CGGTGGTATTGCGCAGTTCCTTCCTGAGGTGAAGAAGTATGAGGAAGAGA
TCCCATATACGCCTACGGAAAGCTGGATCCAGCGCAAACTGCGCCAGAAA
GTGGAGAAGAAAGAGAACATTAACAAGCAATTGACGGAAGGCCTCGAGAC
CTATGAACCATCCAACGACCAACAAGCACGAGGCGACCCGTTCAAGACGC
TGTTTGTCGCTAGACTGAGCTACGATGTCAAGGAATCGGACCTGGAACGG
GAATTTGGTCGTTTCGGCCCTATTGAACGGATTCGCATCGTGAAAGACAC
CGTAACGCCAAAGGGCTCGAAGAAACCACACAGGGGATATGCTTTTATTG
TCTATGAGCGCGAAAAGGATATGAAAGCTGCCTACAAGGAAACGGATGGT
ATCCGCATCAAGGACCGCCGTGTCTTGGTAGACGTCGAGCGCGGTCGTAC
AGTCAAGGGATGGAAGCCTCGTCGCTTTGGTGGTGGTCTTGGAGGTCGTG
GTTACACCAAGGCTTTGCCGTCTCGACCTATCGGCCCTGGCTCTTTCAAC
GCCCCCTCTGGTCCCGGCGGCTATGGTGGTGGATTCCGGGGTGGGTTCGG
TGGCCGAGGTGGTTTCAAGGGAGGATTCCGCGGTGACCGTGGATTTGGTG
GGCCCCGCGGGGGTGTTGGATACCAAGGTGGTCGCAACGGATTCGGTGGA
GGCGGACAGGCTCCCCCCAACGCCCCTTCAGGTCCGGGAGGCGGACGCAG
CGGTGGGTTTGGTGGTCCCCCTGGCGGCGGCAGATTTGAGCGTGAACCCC
GGGGCGCCACTGGCAGCAACAGAGAACCCATCAGGCCCCGGGACGGGTTT
GGCGACCGCGATCGTCGAGACCGTGATCGGGACCGCGACGGTGACCGTCA
CCGGGACCGTGATCGGGATAGTTATCGCTACCGTGACCGCGACCGTGAAC
GCGACCGCGATCGTGGTGACAGGTACGGAGGCCGGGGCGACGACTACGGG
CGGAAGCGATACCATGAAGATGATTCGTATGATGACCCCCGTGCGAAGAG
AAGATACTGAATGACGGACAAGCTCCCCCCTCCGCTTCTGGCGCTCTTCC
AACCTCGCCCGCCTCTGCGTTATGTCACCCCCATCAACCGTGCCCCAGAA
GACTGCAAGAAGAGTAGCATCGGTGGTATTGCGCAGTTCCTTCCTGAGGT
GAAGAAGTATGAGGAAGAGATCCCATATACGCCTACGGAAAGCTGGATCC
AGCGCAAACTGCGCCAGAAAGTGGAGAAGAAAGAGAACATTAACAAGCAA
TTGACGGAAGGCCTCGAGACCTATGAACCATCCAACGACCAACAAGCACG
AGGCGACCCGTTCAAGACGCTGTTTGTCGCTAGACTGAGCTACGATGTCA
AGGAATCGGACCTGGAACGGGAATTTGGTCGTTTCGGCCCTATTGAACGG
ATTCGCATCGTGAAAGACACCGTAACGCCAAAGGGCTCGAAGAAACCACA
CAGGGGATATGCTTTTATTGTCTATGAGCGCGAAAAGGATATGAAAGCTG
CCTACAAGGAAACGGATGGTATCCGCATCAAGGACCGCCGTGTCTTGGTA
GACGTCGAGCGCGGTCGTACAGTCAAGGGATGGAAGCCTCGTCGCTTTGG
TGGTGGTCTTGGAGGTCGTGGTTACACCAAGGCTTTGCCGTCTCGACCTA
TCGGCCCTGGCTCTTTCAACGCCCCCTCTGGTCCCGGCGGCTATGGTGGT
GGATTCCGGGGTGGGTTCGGTGGCCGAGGTGGTTTCAAGGGAGGATTCCG
CGGTGACCGTGGATTTGGTGGGCCCCGCGGGGGTGTTGGATACCAAGGTG
GTCGCAACGGATTCGGTGGAGGCGGACAGGCTCCCCCCAACGCCCCTTCA
GGTCCGGGAGGCGGACGCAGCGGTGGGTTTGGTGGTCCCCCTGGCGGCGG
CAGATTTGAGCGTGAACCCCGGGGCGCCACTGGCAGCAACAGAGAACCCA
TCAGGCCCCGGGACGGGTTTGGCGACCGCGATCGTCGAGACCGTGATCGG
GACCGCGACGGTGACCGTCACCGGGACCGTGATCGGGATAGTTATCGCTA
CCGTGACCGCGACCGTGAACGCGACCGCGATCGTGGTGACAGGTACGGAG
GCCGGGGCGACGACTACGGGCGGAAGCGATACCATGAAGATGATTCGTAT
GATGACCCCCGTGCGAAGAGAAGATACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0030619 | U1 snRNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR012677 |
| PFAM | PF12220 |
| PFAM | PF00076 |
| InterPro | IPR000504 |
| InterPro | IPR034143 |
| InterPro | IPR022023 |
| InterPro | IPR035979 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264G1F |
| Note | antiSMASH:Cluster_1000048.4 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:847843..849230 + |
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