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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:850328..851159- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002290-T1 ID=ATCC10864_002290-T1|Name=ATCC10864_002290-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=832bp|location=Sequence derived from alignment at MCQH01000048:850328..851159- (Aspergillus niger ATCC 10864)
ATGCCTCGTTCCAAGCGTGCCCGCGTCGTGCACGAGTCCAAGACCACCAA
AAAGTCCCACAAGGAACAGACCCGTCGCCTGTACGCTAACATCCGGGAAT
GCATTGAGAAGTACGACCACCTGTTCGTCTTCGGCGTGGACAACATGCGC
AACACCTATCTGAAGGATGTCCGTACCGAGTTCGCCGATAGCCGGTTAGT
CTTCTCTCTCCCCAGCAACCCCCGCCTATCCCCAAGATGCCCCTCCACTC
CAACAACCATGCATGCAAACTAACCACCTGAGCAGTCTCTTCTTCGGCAA
AACCAAGGTCATGGCCGTCGCTCTGGGCCACAACCCCGAAAACGAAGCCG
CGCCCAACCTCCACAAACTCAACCCCTACCTCACCGGCGCCGTCGGTCTC
CTCTTCACCTCCCGCGACCCTCAATCCGTGACCGACTACTTCGAGTCCTT
CCGGCCGCTTGACTTCGCCCGCTCCGGGACAGTTAGTACCCGGGCGTTCT
CGATCCCCAACGGCCAGGTGTATTCGCGGGCCGGAGAGATCCCCGTCTCC
GAGGACGAGCCGCTCAGCCATACCATTGAGCCGGAGTTGCGTAAACTCGG
TGTCCCGACTCGGTTGGTTAAGGGCAAGGTCATGCTGGAGTTGACGGAGG
GTCAGGAGGGATTCCCCGTTTGCAGGGAGGGAGAGGTGCTGGATTCGAGG
CAGACGACGTTGTTGAAGATGTTTGGGGTTGTTATGGCTGAGTTCCATGT
TGCGTTGAAGGCTCATTGGACGAGGGAGTCTGGGGAGGTGGAGATTCTGG
AGAAGGATGAGGCTGGTATGGAGGTTGAGTAA back to topCoding sequence (CDS) from alignment at MCQH01000048:850328..851159- >ATCC10864_002290-T1 ID=ATCC10864_002290-T1|Name=ATCC10864_002290-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1482bp|location=Sequence derived from alignment at MCQH01000048:850328..851159- (Aspergillus niger ATCC 10864)
TCTCTTCTTCGGCAAAACCAAGGTCATGGCCGTCGCTCTGGGCCACAACC
CCGAAAACGAAGCCGCGCCCAACCTCCACAAACTCAACCCCTACCTCACC
GGCGCCGTCGGTCTCCTCTTCACCTCCCGCGACCCTCAATCCGTGACCGA
CTACTTCGAGTCCTTCCGGCCGCTTGACTTCGCCCGCTCCGGGACAGTTA
GTACCCGGGCGTTCTCGATCCCCAACGGCCAGGTGTATTCGCGGGCCGGA
GAGATCCCCGTCTCCGAGGACGAGCCGCTCAGCCATACCATTGAGCCGGA
GTTGCGTAAACTCGGTGTCCCGACTCGGTTGGTTAAGGGCAAGGTCATGC
TGGAGTTGACGGAGGGTCAGGAGGGATTCCCCGTTTGCAGGGAGGGAGAG
GTGCTGGATTCGAGGCAGACGACGTTGTTGAAGATGTTTGGGGTTGTTAT
GGCTGAGTTCCATGTTGCGTTGAAGGCTCATTGGACGAGGGAGTCTGGGG
AGGTGGAGATTCTGGAGAAGGATGAGGCTGGTATGGAGGTTGAGTAAATG
CCTCGTTCCAAGCGTGCCCGCGTCGTGCACGAGTCCAAGACCACCAAAAA
GTCCCACAAGGAACAGACCCGTCGCCTGTACGCTAACATCCGGGAATGCA
TTGAGAAGTACGACCACCTGTTCGTCTTCGGCGTGGACAACATGCGCAAC
ACCTATCTGAAGGATGTCCGTACCGAGTTCGCCGATAGCCGTCTCTTCTT
CGGCAAAACCAAGGTCATGGCCGTCGCTCTGGGCCACAACCCCGAAAACG
AAGCCGCGCCCAACCTCCACAAACTCAACCCCTACCTCACCGGCGCCGTC
GGTCTCCTCTTCACCTCCCGCGACCCTCAATCCGTGACCGACTACTTCGA
GTCCTTCCGGCCGCTTGACTTCGCCCGCTCCGGGACAGTTAGTACCCGGG
CGTTCTCGATCCCCAACGGCCAGGTGTATTCGCGGGCCGGAGAGATCCCC
GTCTCCGAGGACGAGCCGCTCAGCCATACCATTGAGCCGGAGTTGCGTAA
ACTCGGTGTCCCGACTCGGTTGGTTAAGGGCAAGGTCATGCTGGAGTTGA
CGGAGGGTCAGGAGGGATTCCCCGTTTGCAGGGAGGGAGAGGTGCTGGAT
TCGAGGCAGACGACGTTGTTGAAGATGTTTGGGGTTGTTATGGCTGAGTT
CCATGTTGCGTTGAAGGCTCATTGGACGAGGGAGTCTGGGGAGGTGGAGA
TTCTGGAGAAGGATGAGGCTGGTATGGAGGTTGAGTAAATGCCTCGTTCC
AAGCGTGCCCGCGTCGTGCACGAGTCCAAGACCACCAAAAAGTCCCACAA
GGAACAGACCCGTCGCCTGTACGCTAACATCCGGGAATGCATTGAGAAGT
ACGACCACCTGTTCGTCTTCGGCGTGGACAACATGCGCAACACCTATCTG
AAGGATGTCCGTACCGAGTTCGCCGATAGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000027 | ribosomal large subunit assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00466 |
| InterPro | IPR043141 |
| InterPro | IPR040637 |
| InterPro | IPR043164 |
| InterPro | IPR033867 |
| InterPro | IPR001790 |
| PFAM | PF17777 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264W46 |
| Note | antiSMASH:Cluster_1000048.4 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:850328..851159 - |
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