You are here

Home

ATCC10864_002295-T1, ATCC10864_002295-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002295-T1
Unique NameATCC10864_002295-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:861542..862526-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002295-T1 ID=ATCC10864_002295-T1|Name=ATCC10864_002295-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=985bp|location=Sequence derived from alignment at MCQH01000048:861542..862526- (Aspergillus niger ATCC 10864)
ATGAACGTATGTCCCTATCTATTTGATCTATCCACCTAACCTTTCCCCTT
CCCCGCATCCCCCAAACTCAACCTAATACCGACAACAAACAAACAAACTA
ACTACCATCCCCACCAGATCGTCGAATGGGCCTTCGGCAAGCGCATGACG
CCCGCCGAGCGTCTGCGCAAACATCAACGAGCGCTCGACCGAACCCAGCG
CGAACTGGACCGCGAACGAGTCAAGCTTGAGAACCAGGAGAAGAAGCTAG
TCCAGGATATCAAGAAGAGCGCGAAGAATGGGCAGATTGGGGCTTGTAAG
ATCCAGGCGAAGGATTTGGTGAGGACGAGGAGGTGCGTTCCCCAGTCATT
TGACTCTTATATTCAAAGTATGGTGGTTGGTATGCTAATGATGCGGGAAC
AGATATATCCAGAAATTCTACCAGATGCGGACACAGCTACAGGCTATTTC
GCTGCGGATTCAGGTACGATCCCATTCTTTCATTTTACACATCATTCATA
ACTCACAAGGTAAATGGATAGACGGTACGAAGCAACGAACAAATGATGCA
GTCAATGAAAGGCGCAACGATGCTACTAGGCAGCATGAACCGACAGATGA
ATCTCCCCGCATTGCAACGAATCGCAATGGAGTTCGAACGAGAGAACGAT
ATCATGGATCAACGACAGGAAATGATGGATGAGGCGATTGACGAAGCAAC
GGGACTGGAGGGCGAGGAGGAAGAAGGCGAGGATATCGTCAAGGAGGTTC
TTGATGAGATTGGTGTGGATCTTAGCCAGGCGGTTCGTTTCCCTCCTCTT
CGCGTGGGATTGGATGAGGTATATGATGCTGACATACTGCTTAGCTGGGA
GAAACACCCACCGATATACAAAAGACAGCCGTGGGCGAGACGAGAGTTGC
GCAAGCGGTTGGAGCTGGGGGTGGCGGTGGTGCGAATACGAGTGATGATG
ACTTGCAGGCGAGATTGGATAGTCTGCGGAGGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000048:861542..862526-

>ATCC10864_002295-T1 ID=ATCC10864_002295-T1|Name=ATCC10864_002295-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3420bp|location=Sequence derived from alignment at MCQH01000048:861542..862526- (Aspergillus niger ATCC 10864)
CTGGGAGAAACACCCACCGATATACAAAAGACAGCCGTGGGCGAGACGAG
AGTTGCGCAAGCGGTTGGAGCTGGGGGTGGCGGTGGTGCGAATACGAGTG
ATGATGACTTGCAGGCGAGATTGGATAGTCTGCGGAGGTGAACGGTACGA
AGCAACGAACAAATGATGCAGTCAATGAAAGGCGCAACGATGCTACTAGG
CAGCATGAACCGACAGATGAATCTCCCCGCATTGCAACGAATCGCAATGG
AGTTCGAACGAGAGAACGATATCATGGATCAACGACAGGAAATGATGGAT
GAGGCGATTGACGAAGCAACGGGACTGGAGGGCGAGGAGGAAGAAGGCGA
GGATATCGTCAAGGAGGTTCTTGATGAGATTGGTGTGGATCTTAGCCAGG
CGATATATCCAGAAATTCTACCAGATGCGGACACAGCTACAGGCTATTTC
GCTGCGGATTCAGATCGTCGAATGGGCCTTCGGCAAGCGCATGACGCCCG
CCGAGCGTCTGCGCAAACATCAACGAGCGCTCGACCGAACCCAGCGCGAA
CTGGACCGCGAACGAGTCAAGCTTGAGAACCAGGAGAAGAAGCTAGTCCA
GGATATCAAGAAGAGCGCGAAGAATGGGCAGATTGGGGCTTGTAAGATCC
AGGCGAAGGATTTGGTGAGGACGAGGAGATGAACCTGGGAGAAACACCCA
CCGATATACAAAAGACAGCCGTGGGCGAGACGAGAGTTGCGCAAGCGGTT
GGAGCTGGGGGTGGCGGTGGTGCGAATACGAGTGATGATGACTTGCAGGC
GAGATTGGATAGTCTGCGGAGGTGAACGGTACGAAGCAACGAACAAATGA
TGCAGTCAATGAAAGGCGCAACGATGCTACTAGGCAGCATGAACCGACAG
ATGAATCTCCCCGCATTGCAACGAATCGCAATGGAGTTCGAACGAGAGAA
CGATATCATGGATCAACGACAGGAAATGATGGATGAGGCGATTGACGAAG
CAACGGGACTGGAGGGCGAGGAGGAAGAAGGCGAGGATATCGTCAAGGAG
GTTCTTGATGAGATTGGTGTGGATCTTAGCCAGGCGATATATCCAGAAAT
TCTACCAGATGCGGACACAGCTACAGGCTATTTCGCTGCGGATTCAGATC
GTCGAATGGGCCTTCGGCAAGCGCATGACGCCCGCCGAGCGTCTGCGCAA
ACATCAACGAGCGCTCGACCGAACCCAGCGCGAACTGGACCGCGAACGAG
TCAAGCTTGAGAACCAGGAGAAGAAGCTAGTCCAGGATATCAAGAAGAGC
GCGAAGAATGGGCAGATTGGGGCTTGTAAGATCCAGGCGAAGGATTTGGT
GAGGACGAGGAGATGAACCTGGGAGAAACACCCACCGATATACAAAAGAC
AGCCGTGGGCGAGACGAGAGTTGCGCAAGCGGTTGGAGCTGGGGGTGGCG
GTGGTGCGAATACGAGTGATGATGACTTGCAGGCGAGATTGGATAGTCTG
CGGAGGTGAACGGTACGAAGCAACGAACAAATGATGCAGTCAATGAAAGG
CGCAACGATGCTACTAGGCAGCATGAACCGACAGATGAATCTCCCCGCAT
TGCAACGAATCGCAATGGAGTTCGAACGAGAGAACGATATCATGGATCAA
CGACAGGAAATGATGGATGAGGCGATTGACGAAGCAACGGGACTGGAGGG
CGAGGAGGAAGAAGGCGAGGATATCGTCAAGGAGGTTCTTGATGAGATTG
GTGTGGATCTTAGCCAGGCGATATATCCAGAAATTCTACCAGATGCGGAC
ACAGCTACAGGCTATTTCGCTGCGGATTCAGATCGTCGAATGGGCCTTCG
GCAAGCGCATGACGCCCGCCGAGCGTCTGCGCAAACATCAACGAGCGCTC
GACCGAACCCAGCGCGAACTGGACCGCGAACGAGTCAAGCTTGAGAACCA
GGAGAAGAAGCTAGTCCAGGATATCAAGAAGAGCGCGAAGAATGGGCAGA
TTGGGGCTTGTAAGATCCAGGCGAAGGATTTGGTGAGGACGAGGAGATGA
ACCTGGGAGAAACACCCACCGATATACAAAAGACAGCCGTGGGCGAGACG
AGAGTTGCGCAAGCGGTTGGAGCTGGGGGTGGCGGTGGTGCGAATACGAG
TGATGATGACTTGCAGGCGAGATTGGATAGTCTGCGGAGGTGAACGGTAC
GAAGCAACGAACAAATGATGCAGTCAATGAAAGGCGCAACGATGCTACTA
GGCAGCATGAACCGACAGATGAATCTCCCCGCATTGCAACGAATCGCAAT
GGAGTTCGAACGAGAGAACGATATCATGGATCAACGACAGGAAATGATGG
ATGAGGCGATTGACGAAGCAACGGGACTGGAGGGCGAGGAGGAAGAAGGC
GAGGATATCGTCAAGGAGGTTCTTGATGAGATTGGTGTGGATCTTAGCCA
GGCGATATATCCAGAAATTCTACCAGATGCGGACACAGCTACAGGCTATT
TCGCTGCGGATTCAGATCGTCGAATGGGCCTTCGGCAAGCGCATGACGCC
CGCCGAGCGTCTGCGCAAACATCAACGAGCGCTCGACCGAACCCAGCGCG
AACTGGACCGCGAACGAGTCAAGCTTGAGAACCAGGAGAAGAAGCTAGTC
CAGGATATCAAGAAGAGCGCGAAGAATGGGCAGATTGGGGCTTGTAAGAT
CCAGGCGAAGGATTTGGTGAGGACGAGGAGATGAACCTGGGAGAAACACC
CACCGATATACAAAAGACAGCCGTGGGCGAGACGAGAGTTGCGCAAGCGG
TTGGAGCTGGGGGTGGCGGTGGTGCGAATACGAGTGATGATGACTTGCAG
GCGAGATTGGATAGTCTGCGGAGGTGAACGGTACGAAGCAACGAACAAAT
GATGCAGTCAATGAAAGGCGCAACGATGCTACTAGGCAGCATGAACCGAC
AGATGAATCTCCCCGCATTGCAACGAATCGCAATGGAGTTCGAACGAGAG
AACGATATCATGGATCAACGACAGGAAATGATGGATGAGGCGATTGACGA
AGCAACGGGACTGGAGGGCGAGGAGGAAGAAGGCGAGGATATCGTCAAGG
AGGTTCTTGATGAGATTGGTGTGGATCTTAGCCAGGCGATATATCCAGAA
ATTCTACCAGATGCGGACACAGCTACAGGCTATTTCGCTGCGGATTCAGA
TCGTCGAATGGGCCTTCGGCAAGCGCATGACGCCCGCCGAGCGTCTGCGC
AAACATCAACGAGCGCTCGACCGAACCCAGCGCGAACTGGACCGCGAACG
AGTCAAGCTTGAGAACCAGGAGAAGAAGCTAGTCCAGGATATCAAGAAGA
GCGCGAAGAATGGGCAGATTGGGGCTTGTAAGATCCAGGCGAAGGATTTG
GTGAGGACGAGGAGATGAAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002295ATCC10864_002295Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002295-T1ATCC10864_002295-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002295-T1.cdsATCC10864_002295-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002295-T1.exon5ATCC10864_002295-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_002295-T1.exon4ATCC10864_002295-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_002295-T1.exon3ATCC10864_002295-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002295-T1.exon2ATCC10864_002295-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002295-T1.exon1ATCC10864_002295-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005024
PFAMPF03357
Properties
Property NameValue
NoteBUSCO:EOG09264T0J
NoteantiSMASH:Cluster_1000048.4
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:861542..862526 -
Powered by Drupal