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ATCC10864_002320-T1, ATCC10864_002320-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002320-T1
Unique NameATCC10864_002320-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:951037..952497+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002320-T1 ID=ATCC10864_002320-T1|Name=ATCC10864_002320-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1461bp|location=Sequence derived from alignment at MCQH01000048:951037..952497+ (Aspergillus niger ATCC 10864)
ATGCCACGCCATCTCTCTGAAATCCTAAAAGTCTACCCAGAAGACGAGCC
CTGGTGTGCTGGCTTTGCCCCCTCGCAAGGCCGTCGCTGCCACAACCCCA
CAAACGCCAGAAACCGCCGACATGCCAGTTCCCTCCTCGAACAAGGAACC
CGCTTGCTCAGGGCCGGCCAATCTATCGAGCATATACTTGAGGACTTGGC
TCCTCTCGTCCTCTGCACAAGAAATCACCAGAACCAAGCTGTCGGCTTAA
CTAATACTTGGGTCTCACGAGTCGATACATATGTCGCGAAACATCGGTCT
ACTCCTAGGAGCTTGCCGAGTAAATCGACTCCTCGGCGGTCGCCATCACC
AACGATGCGTAATGAAACAAGTATGGAGGATCGACTTGCGGAACTCGAAA
GGAAGATGCAGGATGCAATTCGTAAGGCAGAGAGAGCACAGCGGGAGAAA
GAACGGGCGGAGAGAGACGCTGAGCGGACTAGACGGGATACCGAAAATAT
GGTCAGAAGAAGTGCGGCTATGGGATATGCCAGAGGACAGGAAGAAGCAA
GAAGAAGAAGAAGCTCTCCTCCCCCTACTGTTGAGATTGAGACGACTACG
GTTGAGCACAACGAGGAATACGGAGTGCAGAGAAACTCGATGTCGAGTGG
CTTGCTGTCTTCACAGAGGCAGGACCCTCGTGGAGGGAGTGTCGAGACGA
CCTTGCAGGTCAACACTTCTACCAGCACGAACTTGCAACTCCGCAGAAGC
ACTATCGTTAGCACGACCAGGGTACAGAGGACAAGCGATGCCCCAGCTAC
TCCCGCTCAAGCTGAACGACATGCTGCCACCCCGAGCTCTGAACCCAGAA
TAGTCGAAATCGATGACACCAACGATGCACTAGCTACCCTGCCCCCTGCC
CAGCGAAGCAACAACAATGCAACCTCCGGCTCCAGCAGCACGATCCCAAG
AAGAGCAATCAGCCTCCCCAGCGCAGATCCCGAGTCTACCATCACCACAA
CTGCATCTACCAATCCAGACCATCCTTCATCCACAAACACCCAAGAATCC
ACCCCTCCTACGGAAACCCCAGAAACCTCCACCCCAACCCTTCAACTCCC
AAGCCCTCCTACCTCAAACAACGAAGAACCTCCCTCTACTCCCACAGACA
CACAGGAAACCACAACCCAGACTACCTCTACATCCACATCTACCCCTCAA
CACCACCTCCTCACACCCCCATCAACTCCCCCTCCCTCCATCCCACCCAC
AATCTCAAATTGCGGCATAACCCGCCAACCCATCGAAGGTGACTGCTGCA
TCTGCATCTGCCCTCTAGACGAAGAAGACTCTACCTCGCTCGTCTGGTGC
CAGAAACAATGCGGGAGTAACTTCCACCGCGAGTGTATGGATCGGTGGCT
AGCCTCGTCACTTGACGCGAACCGGCAAACGAGTTGTCCGATGTGTCGGG
GGAAGTGGTAG
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Coding sequence (CDS) from alignment at MCQH01000048:951037..952497+

>ATCC10864_002320-T1 ID=ATCC10864_002320-T1|Name=ATCC10864_002320-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1461bp|location=Sequence derived from alignment at MCQH01000048:951037..952497+ (Aspergillus niger ATCC 10864)
ATGCCACGCCATCTCTCTGAAATCCTAAAAGTCTACCCAGAAGACGAGCC
CTGGTGTGCTGGCTTTGCCCCCTCGCAAGGCCGTCGCTGCCACAACCCCA
CAAACGCCAGAAACCGCCGACATGCCAGTTCCCTCCTCGAACAAGGAACC
CGCTTGCTCAGGGCCGGCCAATCTATCGAGCATATACTTGAGGACTTGGC
TCCTCTCGTCCTCTGCACAAGAAATCACCAGAACCAAGCTGTCGGCTTAA
CTAATACTTGGGTCTCACGAGTCGATACATATGTCGCGAAACATCGGTCT
ACTCCTAGGAGCTTGCCGAGTAAATCGACTCCTCGGCGGTCGCCATCACC
AACGATGCGTAATGAAACAAGTATGGAGGATCGACTTGCGGAACTCGAAA
GGAAGATGCAGGATGCAATTCGTAAGGCAGAGAGAGCACAGCGGGAGAAA
GAACGGGCGGAGAGAGACGCTGAGCGGACTAGACGGGATACCGAAAATAT
GGTCAGAAGAAGTGCGGCTATGGGATATGCCAGAGGACAGGAAGAAGCAA
GAAGAAGAAGAAGCTCTCCTCCCCCTACTGTTGAGATTGAGACGACTACG
GTTGAGCACAACGAGGAATACGGAGTGCAGAGAAACTCGATGTCGAGTGG
CTTGCTGTCTTCACAGAGGCAGGACCCTCGTGGAGGGAGTGTCGAGACGA
CCTTGCAGGTCAACACTTCTACCAGCACGAACTTGCAACTCCGCAGAAGC
ACTATCGTTAGCACGACCAGGGTACAGAGGACAAGCGATGCCCCAGCTAC
TCCCGCTCAAGCTGAACGACATGCTGCCACCCCGAGCTCTGAACCCAGAA
TAGTCGAAATCGATGACACCAACGATGCACTAGCTACCCTGCCCCCTGCC
CAGCGAAGCAACAACAATGCAACCTCCGGCTCCAGCAGCACGATCCCAAG
AAGAGCAATCAGCCTCCCCAGCGCAGATCCCGAGTCTACCATCACCACAA
CTGCATCTACCAATCCAGACCATCCTTCATCCACAAACACCCAAGAATCC
ACCCCTCCTACGGAAACCCCAGAAACCTCCACCCCAACCCTTCAACTCCC
AAGCCCTCCTACCTCAAACAACGAAGAACCTCCCTCTACTCCCACAGACA
CACAGGAAACCACAACCCAGACTACCTCTACATCCACATCTACCCCTCAA
CACCACCTCCTCACACCCCCATCAACTCCCCCTCCCTCCATCCCACCCAC
AATCTCAAATTGCGGCATAACCCGCCAACCCATCGAAGGTGACTGCTGCA
TCTGCATCTGCCCTCTAGACGAAGAAGACTCTACCTCGCTCGTCTGGTGC
CAGAAACAATGCGGGAGTAACTTCCACCGCGAGTGTATGGATCGGTGGCT
AGCCTCGTCACTTGACGCGAACCGGCAAACGAGTTGTCCGATGTGTCGGG
GGAAGTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0061630ubiquitin protein ligase activity
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002320ATCC10864_002320Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002320-T1.exon1ATCC10864_002320-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002320-T1.cdsATCC10864_002320-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002320-T1ATCC10864_002320-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001841
PFAMPF13639
InterProIPR024766
PFAMPF12678
InterProIPR013083
InterProIPR039903
PFAMPF12861
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:951037..952497 +
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