You are here

Home

ATCC10864_002412-T1, ATCC10864_002412-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002412-T1
Unique NameATCC10864_002412-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000051:240940..241544+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002412-T1 ID=ATCC10864_002412-T1|Name=ATCC10864_002412-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=605bp|location=Sequence derived from alignment at MCQH01000051:240940..241544+ (Aspergillus niger ATCC 10864)
ATGGCCGCTCCCGCTTCCAAGACCATCCACGACCTTAACGGCTCCTGGAC
CACCGTAAGACAACCCCAAACTCCCACATCTATCACCCAACTCCAATATA
CTAACAAGACCCCCAGAACAACGACCTCTCTGAGTCCTCCGCCGACATCC
TCAAGGTTCAGGGTGTGAACTGGCTGACCCGCAAGGTGATCGCCATGGCG
AACGTGACTCTGAACATCAGCCAGCGCACGGACGAGAACGGCAACATCCT
GCTGGACATCGAGAACAAGCCCAGCGGCGGCCTGCCGGCCACGCAGGAGA
AGCGAGTCCTGAACTGGGAGCCCGTGGAGCTCCACCACGGCCTCTTCGGC
AACATCCGCGGTCGCTCCCGCCTCTGCAAGCTCGCCGATCTCGACGACGA
TTACCTCCGCCAGGGATGGGAGGACGGCACCGAGGAGGTCATGCACTTCA
AGACCGAGCATCTCGAGTCCAAGGGCGTTGTCACCCAGCAGGTCGCCGGC
TTCATTGTTATCGGCGGTGTTCGCTACCACGCCAGGCGGGTCCTGGTCAC
TAAGGACGATGGCGAGAAGCTTGAGGCTAAGCTTGTCTACGACTTCCAGG
GTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000051:240940..241544+

>ATCC10864_002412-T1 ID=ATCC10864_002412-T1|Name=ATCC10864_002412-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1086bp|location=Sequence derived from alignment at MCQH01000051:240940..241544+ (Aspergillus niger ATCC 10864)
ATGGCCGCTCCCGCTTCCAAGACCATCCACGACCTTAACGGCTCCTGGAC
CACCAACAACGACCTCTCTGAGTCCTCCGCCGACATCCTCAAGGTTCAGG
GTGTGAACTGGCTGACCCGCAAGGTGATCGCCATGGCGAACGTGACTCTG
AACATCAGCCAGCGCACGGACGAGAACGGCAACATCCTGCTGGACATCGA
GAACAAGCCCAGCGGCGGCCTGCCGGCCACGCAGGAGAAGCGAGTCCTGA
ACTGGGAGCCCGTGGAGCTCCACCACGGCCTCTTCGGCAACATCCGCGGT
CGCTCCCGCCTCTGCAAGCTCGCCGATCTCGACGACGATTACCTCCGCCA
GGGATGGGAGGACGGCACCGAGGAGGTCATGCACTTCAAGACCGAGCATC
TCGAGTCCAAGGGCGTTGTCACCCAGCAGGTCGCCGGCTTCATTGTTATC
GGCGGTGTTCGCTACCACGCCAGGCGGGTCCTGGTCACTAAGGACGATGG
CGAGAAGCTTGAGGCTAAGCTTGTCTACGACTTCCAGGGTTAGATGGCCG
CTCCCGCTTCCAAGACCATCCACGACCTTAACGGCTCCTGGACCACCAAC
AACGACCTCTCTGAGTCCTCCGCCGACATCCTCAAGGTTCAGGGTGTGAA
CTGGCTGACCCGCAAGGTGATCGCCATGGCGAACGTGACTCTGAACATCA
GCCAGCGCACGGACGAGAACGGCAACATCCTGCTGGACATCGAGAACAAG
CCCAGCGGCGGCCTGCCGGCCACGCAGGAGAAGCGAGTCCTGAACTGGGA
GCCCGTGGAGCTCCACCACGGCCTCTTCGGCAACATCCGCGGTCGCTCCC
GCCTCTGCAAGCTCGCCGATCTCGACGACGATTACCTCCGCCAGGGATGG
GAGGACGGCACCGAGGAGGTCATGCACTTCAAGACCGAGCATCTCGAGTC
CAAGGGCGTTGTCACCCAGCAGGTCGCCGGCTTCATTGTTATCGGCGGTG
TTCGCTACCACGCCAGGCGGGTCCTGGTCACTAAGGACGATGGCGAGAAG
CTTGAGGCTAAGCTTGTCTACGACTTCCAGGGTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002412ATCC10864_002412Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002412-T1.exon1ATCC10864_002412-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002412-T1.exon2ATCC10864_002412-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002412-T1.cdsATCC10864_002412-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002412-T1ATCC10864_002412-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012674
Properties
Property NameValue
NoteantiSMASH:Cluster_1000051.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000051supercontigMCQH01000051:240940..241544 +
Powered by Drupal