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ATCC10864_002441-T1, ATCC10864_002441-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002441-T1
Unique NameATCC10864_002441-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000051:328472..329560-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002441-T1 ID=ATCC10864_002441-T1|Name=ATCC10864_002441-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1089bp|location=Sequence derived from alignment at MCQH01000051:328472..329560- (Aspergillus niger ATCC 10864)
ATGAAGTCATACATGTCATGGGCATTAACTGCCCTTGCTGCCACAGTGCC
TCTCAGTGCAGCTCAGACATACACCGACTGCAACCCCTTGAACAGTAAGT
AAAGGCATATATTATCGGAGAGTAGAATAATTGACTCATATTCTTAGAAA
CCTGCACACCAGACAAGGGTCTCAACCAGTGGTCCCTGAGCACCAACTTC
ACTGATGGCTCGTCTTGGCGTGATAGATGGAATGTAACCGCCGATACCGT
GAACAGCACCTCCAAAGGTGCCGAGTTCAAGATCAGCCAGGAGGGCGATG
CCCCTACCATTGAGTCCAACTTCTACATCTTCTTCGGCTATGTGGAGGTC
AAATTCCGTGCTGCCAATGGTACCGGTATCATCAGCACCAGTGTGATGGA
GTCTGACGACCTGGATGAAATTGACTGGGTACGGTCCGCCCAAAATTCGT
AGTGATATTCATGCTAACCCCACACAGGAACAAGTCAGTACATATGACTC
GGAAATCCAAACGAATTACTTTGGCAAAGGCAACACCACGTCCTACGACC
GTGCCACCACCGTGAACGTCACCACACCCGAAGAGACCTACCACACCTAT
GGAGTCAACTGGACATCCAGCAAGACGGAGTGGATACTTGACGGCACTGT
CGTCCGTACGCTCGAGTATGCCGACGCTCTCAATGGCAAGAACTACCCCC
AGACCCCCATGACCATCCGTATCGGTATCTGGGCTGGTGGTGACCCCGAC
AATTCCGAGGGAACCATCGAATGGGCTGGTGGTGAGACCGACTACGACGA
CGGCCCGTTCATCATGTATTTGGAGTCGGTCAACATCATTAACTACACCC
CCGCTGAGTACTACAAGTACACGGACAAGACTGGCGACTACACAAGTATC
AAGGCCTACAACACCACCACATCGTCCAAGTCGACCAATTCGTCCAGTAG
CTCGTCCTCGTCCTCGGCCTCTTCCTCTTCAAGCTCGAGCTCCATCTCTA
CATCCAGCAGTGGTGCCAGTGGTCTATCCTACAGCGGGGTCTTGATGACG
ATCCTTGGGTTGGGCACATTCGCGGGATTGCTTCTCTAG
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Coding sequence (CDS) from alignment at MCQH01000051:328472..329560-

>ATCC10864_002441-T1 ID=ATCC10864_002441-T1|Name=ATCC10864_002441-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2961bp|location=Sequence derived from alignment at MCQH01000051:328472..329560- (Aspergillus niger ATCC 10864)
GAACAAGTCAGTACATATGACTCGGAAATCCAAACGAATTACTTTGGCAA
AGGCAACACCACGTCCTACGACCGTGCCACCACCGTGAACGTCACCACAC
CCGAAGAGACCTACCACACCTATGGAGTCAACTGGACATCCAGCAAGACG
GAGTGGATACTTGACGGCACTGTCGTCCGTACGCTCGAGTATGCCGACGC
TCTCAATGGCAAGAACTACCCCCAGACCCCCATGACCATCCGTATCGGTA
TCTGGGCTGGTGGTGACCCCGACAATTCCGAGGGAACCATCGAATGGGCT
GGTGGTGAGACCGACTACGACGACGGCCCGTTCATCATGTATTTGGAGTC
GGTCAACATCATTAACTACACCCCCGCTGAGTACTACAAGTACACGGACA
AGACTGGCGACTACACAAGTATCAAGGCCTACAACACCACCACATCGTCC
AAGTCGACCAATTCGTCCAGTAGCTCGTCCTCGTCCTCGGCCTCTTCCTC
TTCAAGCTCGAGCTCCATCTCTACATCCAGCAGTGGTGCCAGTGGTCTAT
CCTACAGCGGGGTCTTGATGACGATCCTTGGGTTGGGCACATTCGCGGGA
TTGCTTCTCTAGAAACCTGCACACCAGACAAGGGTCTCAACCAGTGGTCC
CTGAGCACCAACTTCACTGATGGCTCGTCTTGGCGTGATAGATGGAATGT
AACCGCCGATACCGTGAACAGCACCTCCAAAGGTGCCGAGTTCAAGATCA
GCCAGGAGGGCGATGCCCCTACCATTGAGTCCAACTTCTACATCTTCTTC
GGCTATGTGGAGGTCAAATTCCGTGCTGCCAATGGTACCGGTATCATCAG
CACCAGTGTGATGGAGTCTGACGACCTGGATGAAATTGACTGGATGAAGT
CATACATGTCATGGGCATTAACTGCCCTTGCTGCCACAGTGCCTCTCAGT
GCAGCTCAGACATACACCGACTGCAACCCCTTGAACAGAACAAGTCAGTA
CATATGACTCGGAAATCCAAACGAATTACTTTGGCAAAGGCAACACCACG
TCCTACGACCGTGCCACCACCGTGAACGTCACCACACCCGAAGAGACCTA
CCACACCTATGGAGTCAACTGGACATCCAGCAAGACGGAGTGGATACTTG
ACGGCACTGTCGTCCGTACGCTCGAGTATGCCGACGCTCTCAATGGCAAG
AACTACCCCCAGACCCCCATGACCATCCGTATCGGTATCTGGGCTGGTGG
TGACCCCGACAATTCCGAGGGAACCATCGAATGGGCTGGTGGTGAGACCG
ACTACGACGACGGCCCGTTCATCATGTATTTGGAGTCGGTCAACATCATT
AACTACACCCCCGCTGAGTACTACAAGTACACGGACAAGACTGGCGACTA
CACAAGTATCAAGGCCTACAACACCACCACATCGTCCAAGTCGACCAATT
CGTCCAGTAGCTCGTCCTCGTCCTCGGCCTCTTCCTCTTCAAGCTCGAGC
TCCATCTCTACATCCAGCAGTGGTGCCAGTGGTCTATCCTACAGCGGGGT
CTTGATGACGATCCTTGGGTTGGGCACATTCGCGGGATTGCTTCTCTAGA
AACCTGCACACCAGACAAGGGTCTCAACCAGTGGTCCCTGAGCACCAACT
TCACTGATGGCTCGTCTTGGCGTGATAGATGGAATGTAACCGCCGATACC
GTGAACAGCACCTCCAAAGGTGCCGAGTTCAAGATCAGCCAGGAGGGCGA
TGCCCCTACCATTGAGTCCAACTTCTACATCTTCTTCGGCTATGTGGAGG
TCAAATTCCGTGCTGCCAATGGTACCGGTATCATCAGCACCAGTGTGATG
GAGTCTGACGACCTGGATGAAATTGACTGGATGAAGTCATACATGTCATG
GGCATTAACTGCCCTTGCTGCCACAGTGCCTCTCAGTGCAGCTCAGACAT
ACACCGACTGCAACCCCTTGAACAGAACAAGTCAGTACATATGACTCGGA
AATCCAAACGAATTACTTTGGCAAAGGCAACACCACGTCCTACGACCGTG
CCACCACCGTGAACGTCACCACACCCGAAGAGACCTACCACACCTATGGA
GTCAACTGGACATCCAGCAAGACGGAGTGGATACTTGACGGCACTGTCGT
CCGTACGCTCGAGTATGCCGACGCTCTCAATGGCAAGAACTACCCCCAGA
CCCCCATGACCATCCGTATCGGTATCTGGGCTGGTGGTGACCCCGACAAT
TCCGAGGGAACCATCGAATGGGCTGGTGGTGAGACCGACTACGACGACGG
CCCGTTCATCATGTATTTGGAGTCGGTCAACATCATTAACTACACCCCCG
CTGAGTACTACAAGTACACGGACAAGACTGGCGACTACACAAGTATCAAG
GCCTACAACACCACCACATCGTCCAAGTCGACCAATTCGTCCAGTAGCTC
GTCCTCGTCCTCGGCCTCTTCCTCTTCAAGCTCGAGCTCCATCTCTACAT
CCAGCAGTGGTGCCAGTGGTCTATCCTACAGCGGGGTCTTGATGACGATC
CTTGGGTTGGGCACATTCGCGGGATTGCTTCTCTAGAAACCTGCACACCA
GACAAGGGTCTCAACCAGTGGTCCCTGAGCACCAACTTCACTGATGGCTC
GTCTTGGCGTGATAGATGGAATGTAACCGCCGATACCGTGAACAGCACCT
CCAAAGGTGCCGAGTTCAAGATCAGCCAGGAGGGCGATGCCCCTACCATT
GAGTCCAACTTCTACATCTTCTTCGGCTATGTGGAGGTCAAATTCCGTGC
TGCCAATGGTACCGGTATCATCAGCACCAGTGTGATGGAGTCTGACGACC
TGGATGAAATTGACTGGATGAAGTCATACATGTCATGGGCATTAACTGCC
CTTGCTGCCACAGTGCCTCTCAGTGCAGCTCAGACATACACCGACTGCAA
CCCCTTGAACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Biological Process
TermDefinition
GO:0071555cell wall organization
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002441ATCC10864_002441Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002441-T1ATCC10864_002441-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002441-T1.cdsATCC10864_002441-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002441-T1.exon3ATCC10864_002441-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002441-T1.exon2ATCC10864_002441-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002441-T1.exon1ATCC10864_002441-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00722
InterProIPR017168
InterProIPR000757
InterProIPR013320
Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH16
NoteantiSMASH:Cluster_1000051.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000051supercontigMCQH01000051:328472..329560 -
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