You are here

Home

ATCC10864_002449-T1, ATCC10864_002449-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002449-T1
Unique NameATCC10864_002449-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000051:353588..354503+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002449-T1 ID=ATCC10864_002449-T1|Name=ATCC10864_002449-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=916bp|location=Sequence derived from alignment at MCQH01000051:353588..354503+ (Aspergillus niger ATCC 10864)
ATGACAATCCTCTGTCTACATGGCGGCTTCGGCAGCGCCCAAAACTTCCA
AGTGCAACTCCATCCCCTAGTTAGTACCTACCAATCATTATACCCCGATA
CCACCTTCCACTACATCAACGGCGGTCATCCCGCCACGCCTCCGCCAGGA
AGCGAGGATTACTTCGGCCCACCGCCTCATTACAGATTCATCGAATACGA
TGGAATTGGGCGGTCCGATGATGTGATGGAGCGGATTCGTCAGCTCCCGA
GGGGAGCCACGGCCGAAGATACCATGCGGGTGTTGACCCACGAACATGAG
ATGATGTCTGCCGATTGTGTGAGAGAGGCGTTGCAGAGACTGTTGGGGAT
ATTGGATGAAAATCCGGAAATTGACGTATGTTGGGACCCTCCCTTTCCCC
TTCACCGCTTTGGAGGCAACATGGCTGCCAAATACTGATATCTGAACCAG
GGAGTCTTGGGCTTTTCGGAGGGCGCTACAGTCGCTGCTACTTTGTTGCT
TGAAGAGGAGCGACTTGTTCAGGAGGAGGGTAGGAAGAGAAGGCTTAAGG
TATGAATATGATATATAGACGTATACAATCACTACCACATCAGGCTAACA
CATTATCTGCTGGGTTCAGTACGGGGTCTTCATAGCAGGCTGGCCCCCCC
TTCGTATTGACGGCGATCGAGTAACAGGCTGTCTGGCGGATGAGACAGAA
GACATGATCGAAGTGCCGACGTGTCATATCATCGGGGCGAATGATCCCTA
CGTGGATGGCACCATGGCGCTGTATGGGGTTTGTGATCCCGATACGGCCA
TCATGTTTGATCATGGCAAGGGCCATACCATTCCGCGGGACATGGCGACG
ATGAAGGAGGCGGCAGAGGTGATTGAGCAGACCAGGAGACGGGGGATTGC
TGCCGGGGATGTGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000051:353588..354503+

>ATCC10864_002449-T1 ID=ATCC10864_002449-T1|Name=ATCC10864_002449-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2313bp|location=Sequence derived from alignment at MCQH01000051:353588..354503+ (Aspergillus niger ATCC 10864)
ATGACAATCCTCTGTCTACATGGCGGCTTCGGCAGCGCCCAAAACTTCCA
AGTGCAACTCCATCCCCTAGTTAGTACCTACCAATCATTATACCCCGATA
CCACCTTCCACTACATCAACGGCGGTCATCCCGCCACGCCTCCGCCAGGA
AGCGAGGATTACTTCGGCCCACCGCCTCATTACAGATTCATCGAATACGA
TGGAATTGGGCGGTCCGATGATGTGATGGAGCGGATTCGTCAGCTCCCGA
GGGGAGCCACGGCCGAAGATACCATGCGGGTGTTGACCCACGAACATGAG
ATGATGTCTGCCGATTGTGTGAGAGAGGCGTTGCAGAGACTGTTGGGGAT
ATTGGATGAAAATCCGGAAATTGACGGAGTCTTGGGCTTTTCGGAGGGCG
CTACAGTCGCTGCTACTTTGTTGCTTGAAGAGGAGCGACTTGTTCAGGAG
GAGGGTAGGAAGAGAAGGCTTAAGTACGGGGTCTTCATAGCAGGCTGGCC
CCCCCTTCGTATTGACGGCGATCGAGTAACAGGCTGTCTGGCGGATGAGA
CAGAAGACATGATCGAAGTGCCGACGTGTCATATCATCGGGGCGAATGAT
CCCTACGTGGATGGCACCATGGCGCTGTATGGGGTTTGTGATCCCGATAC
GGCCATCATGTTTGATCATGGCAAGGGCCATACCATTCCGCGGGACATGG
CGACGATGAAGGAGGCGGCAGAGGTGATTGAGCAGACCAGGAGACGGGGG
ATTGCTGCCGGGGATGTGTAGATGACAATCCTCTGTCTACATGGCGGCTT
CGGCAGCGCCCAAAACTTCCAAGTGCAACTCCATCCCCTAGTTAGTACCT
ACCAATCATTATACCCCGATACCACCTTCCACTACATCAACGGCGGTCAT
CCCGCCACGCCTCCGCCAGGAAGCGAGGATTACTTCGGCCCACCGCCTCA
TTACAGATTCATCGAATACGATGGAATTGGGCGGTCCGATGATGTGATGG
AGCGGATTCGTCAGCTCCCGAGGGGAGCCACGGCCGAAGATACCATGCGG
GTGTTGACCCACGAACATGAGATGATGTCTGCCGATTGTGTGAGAGAGGC
GTTGCAGAGACTGTTGGGGATATTGGATGAAAATCCGGAAATTGACGGAG
TCTTGGGCTTTTCGGAGGGCGCTACAGTCGCTGCTACTTTGTTGCTTGAA
GAGGAGCGACTTGTTCAGGAGGAGGGTAGGAAGAGAAGGCTTAAGTACGG
GGTCTTCATAGCAGGCTGGCCCCCCCTTCGTATTGACGGCGATCGAGTAA
CAGGCTGTCTGGCGGATGAGACAGAAGACATGATCGAAGTGCCGACGTGT
CATATCATCGGGGCGAATGATCCCTACGTGGATGGCACCATGGCGCTGTA
TGGGGTTTGTGATCCCGATACGGCCATCATGTTTGATCATGGCAAGGGCC
ATACCATTCCGCGGGACATGGCGACGATGAAGGAGGCGGCAGAGGTGATT
GAGCAGACCAGGAGACGGGGGATTGCTGCCGGGGATGTGTAGATGACAAT
CCTCTGTCTACATGGCGGCTTCGGCAGCGCCCAAAACTTCCAAGTGCAAC
TCCATCCCCTAGTTAGTACCTACCAATCATTATACCCCGATACCACCTTC
CACTACATCAACGGCGGTCATCCCGCCACGCCTCCGCCAGGAAGCGAGGA
TTACTTCGGCCCACCGCCTCATTACAGATTCATCGAATACGATGGAATTG
GGCGGTCCGATGATGTGATGGAGCGGATTCGTCAGCTCCCGAGGGGAGCC
ACGGCCGAAGATACCATGCGGGTGTTGACCCACGAACATGAGATGATGTC
TGCCGATTGTGTGAGAGAGGCGTTGCAGAGACTGTTGGGGATATTGGATG
AAAATCCGGAAATTGACGGAGTCTTGGGCTTTTCGGAGGGCGCTACAGTC
GCTGCTACTTTGTTGCTTGAAGAGGAGCGACTTGTTCAGGAGGAGGGTAG
GAAGAGAAGGCTTAAGTACGGGGTCTTCATAGCAGGCTGGCCCCCCCTTC
GTATTGACGGCGATCGAGTAACAGGCTGTCTGGCGGATGAGACAGAAGAC
ATGATCGAAGTGCCGACGTGTCATATCATCGGGGCGAATGATCCCTACGT
GGATGGCACCATGGCGCTGTATGGGGTTTGTGATCCCGATACGGCCATCA
TGTTTGATCATGGCAAGGGCCATACCATTCCGCGGGACATGGCGACGATG
AAGGAGGCGGCAGAGGTGATTGAGCAGACCAGGAGACGGGGGATTGCTGC
CGGGGATGTGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002449ATCC10864_002449Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002449-T1.exon1ATCC10864_002449-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002449-T1.exon2ATCC10864_002449-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002449-T1.exon3ATCC10864_002449-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002449-T1.cdsATCC10864_002449-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002449-T1ATCC10864_002449-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03959
InterProIPR005645
InterProIPR029058
Properties
Property NameValue
NoteantiSMASH:Cluster_1000051.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000051supercontigMCQH01000051:353588..354503 +
Powered by Drupal