You are here

Home

ATCC10864_002454-T1, ATCC10864_002454-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002454-T1
Unique NameATCC10864_002454-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000051:366647..367851+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002454-T1 ID=ATCC10864_002454-T1|Name=ATCC10864_002454-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1205bp|location=Sequence derived from alignment at MCQH01000051:366647..367851+ (Aspergillus niger ATCC 10864)
ATGTCTGTCAAATTGATCCTTCCCGCCCTCAGCCTCTTCACCCTCTATGC
CATCTGGTACTACGCCGACGCCAATGGCCTCCTCGAACTAGCCAGAGAGA
GCATCGAGCGCAAAACACTCCCAGGCAGCGATGCACCTCTGCGAACCGTC
TACACTGGCTTCCCTCAACTGGACCACTTGCTCACCACCCTAACCACCTT
TTTCTGGCCCACCACCGATGGAAGCCACCCTGCCTTGACCCTCCACACCC
TCGGATTCGCAGGAACATTTGGCTCCGCTTGGATCCTGATAACCCTAGAG
TCATGGCGGCAAGGCAATGCCTGGACACTAGCAGCATTGTATGTCCACCT
CCATCTACCTATATGTACCGAGCTAACTTCCTCACCACCAGTCCCCTAGT
ATTCGGTCTCTCCGCCCAAACCCTAACGTTCGCCTTCGCAGCACCTCTCT
ACTGCGCCCTACAACTCACCACCTCCATAACCTCCACCTCCCCCACAGCA
ACTAACATCTACATCCCCAAAACTATCCTCACTACTCTCCCCCTGATCTT
CACCCTCTCCTACATCCTCCCAAGCGCCCTGATGGTCCTGCCCCTCTCCT
CAACCATAACAACCGACCTAAAGCAACTCTTCATCGCCCTCTGGCAACCA
TTCCCAGCATACATCTCCATCCTCCTCACCCTTTCCCACACCCTCTTCTC
CCCATTCACATCTACCCCTAAACCAACCCAAAAGAACCACAACCTCTCCT
CCCTACGCTTTATCTACGCCTTCACCTTCTTCCACTCCCTCATCTCCCAT
CTCGTCACCCTTACTGTCTCACTATCTACCCTCCTTGCACCTTCTATCCT
CTCCCCGGAATACCGTACCTCCCTGCATCCCAGTATTGTGTTTGGGATCC
CCACGCCGTGGACATCGCCTGTTATACAGGTGGCTAGTATTGCGGACGGG
GTGCATGCGTTCCTGAGATGGGATTACTTGATTGGGTCCGCAGGGATGGT
GGTTTGGGCGTGGAGGCTATACGGGAATGCGGTGAAGATGGACAAAGGTG
GTGCAATGGGGTGGTGTGAATGGGTGTCGTTAGTGGTGAGAGTGGGGTTG
TTGGGGGTTGTTGCTGGGCCCGTAGGGGCGGCGGTGGTACTGGTTTGGGG
GAGGGATGAGATGGTTTTCGGGAGGGGGGAGAAGGGGGGTGAGAAAAGGA
GTTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000051:366647..367851+

>ATCC10864_002454-T1 ID=ATCC10864_002454-T1|Name=ATCC10864_002454-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2304bp|location=Sequence derived from alignment at MCQH01000051:366647..367851+ (Aspergillus niger ATCC 10864)
ATGTCTGTCAAATTGATCCTTCCCGCCCTCAGCCTCTTCACCCTCTATGC
CATCTGGTACTACGCCGACGCCAATGGCCTCCTCGAACTAGCCAGAGAGA
GCATCGAGCGCAAAACACTCCCAGGCAGCGATGCACCTCTGCGAACCGTC
TACACTGGCTTCCCTCAACTGGACCACTTGCTCACCACCCTAACCACCTT
TTTCTGGCCCACCACCGATGGAAGCCACCCTGCCTTGACCCTCCACACCC
TCGGATTCGCAGGAACATTTGGCTCCGCTTGGATCCTGATAACCCTAGAG
TCATGGCGGCAAGGCAATGCCTGGACACTAGCAGCATTTCCCCTAGTATT
CGGTCTCTCCGCCCAAACCCTAACGTTCGCCTTCGCAGCACCTCTCTACT
GCGCCCTACAACTCACCACCTCCATAACCTCCACCTCCCCCACAGCAACT
AACATCTACATCCCCAAAACTATCCTCACTACTCTCCCCCTGATCTTCAC
CCTCTCCTACATCCTCCCAAGCGCCCTGATGGTCCTGCCCCTCTCCTCAA
CCATAACAACCGACCTAAAGCAACTCTTCATCGCCCTCTGGCAACCATTC
CCAGCATACATCTCCATCCTCCTCACCCTTTCCCACACCCTCTTCTCCCC
ATTCACATCTACCCCTAAACCAACCCAAAAGAACCACAACCTCTCCTCCC
TACGCTTTATCTACGCCTTCACCTTCTTCCACTCCCTCATCTCCCATCTC
GTCACCCTTACTGTCTCACTATCTACCCTCCTTGCACCTTCTATCCTCTC
CCCGGAATACCGTACCTCCCTGCATCCCAGTATTGTGTTTGGGATCCCCA
CGCCGTGGACATCGCCTGTTATACAGGTGGCTAGTATTGCGGACGGGGTG
CATGCGTTCCTGAGATGGGATTACTTGATTGGGTCCGCAGGGATGGTGGT
TTGGGCGTGGAGGCTATACGGGAATGCGGTGAAGATGGACAAAGGTGGTG
CAATGGGGTGGTGTGAATGGGTGTCGTTAGTGGTGAGAGTGGGGTTGTTG
GGGGTTGTTGCTGGGCCCGTAGGGGCGGCGGTGGTACTGGTTTGGGGGAG
GGATGAGATGGTTTTCGGGAGGGGGGAGAAGGGGGGTGAGAAAAGGAGTT
AAATGTCTGTCAAATTGATCCTTCCCGCCCTCAGCCTCTTCACCCTCTAT
GCCATCTGGTACTACGCCGACGCCAATGGCCTCCTCGAACTAGCCAGAGA
GAGCATCGAGCGCAAAACACTCCCAGGCAGCGATGCACCTCTGCGAACCG
TCTACACTGGCTTCCCTCAACTGGACCACTTGCTCACCACCCTAACCACC
TTTTTCTGGCCCACCACCGATGGAAGCCACCCTGCCTTGACCCTCCACAC
CCTCGGATTCGCAGGAACATTTGGCTCCGCTTGGATCCTGATAACCCTAG
AGTCATGGCGGCAAGGCAATGCCTGGACACTAGCAGCATTTCCCCTAGTA
TTCGGTCTCTCCGCCCAAACCCTAACGTTCGCCTTCGCAGCACCTCTCTA
CTGCGCCCTACAACTCACCACCTCCATAACCTCCACCTCCCCCACAGCAA
CTAACATCTACATCCCCAAAACTATCCTCACTACTCTCCCCCTGATCTTC
ACCCTCTCCTACATCCTCCCAAGCGCCCTGATGGTCCTGCCCCTCTCCTC
AACCATAACAACCGACCTAAAGCAACTCTTCATCGCCCTCTGGCAACCAT
TCCCAGCATACATCTCCATCCTCCTCACCCTTTCCCACACCCTCTTCTCC
CCATTCACATCTACCCCTAAACCAACCCAAAAGAACCACAACCTCTCCTC
CCTACGCTTTATCTACGCCTTCACCTTCTTCCACTCCCTCATCTCCCATC
TCGTCACCCTTACTGTCTCACTATCTACCCTCCTTGCACCTTCTATCCTC
TCCCCGGAATACCGTACCTCCCTGCATCCCAGTATTGTGTTTGGGATCCC
CACGCCGTGGACATCGCCTGTTATACAGGTGGCTAGTATTGCGGACGGGG
TGCATGCGTTCCTGAGATGGGATTACTTGATTGGGTCCGCAGGGATGGTG
GTTTGGGCGTGGAGGCTATACGGGAATGCGGTGAAGATGGACAAAGGTGG
TGCAATGGGGTGGTGTGAATGGGTGTCGTTAGTGGTGAGAGTGGGGTTGT
TGGGGGTTGTTGCTGGGCCCGTAGGGGCGGCGGTGGTACTGGTTTGGGGG
AGGGATGAGATGGTTTTCGGGAGGGGGGAGAAGGGGGGTGAGAAAAGGAG
TTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002454ATCC10864_002454Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002454-T1.exon1ATCC10864_002454-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002454-T1.exon2ATCC10864_002454-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002454-T1.cdsATCC10864_002454-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002454-T1ATCC10864_002454-T1-proteinAspergillus niger ATCC 10864polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_1000051.4
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000051supercontigMCQH01000051:366647..367851 +
Powered by Drupal