You are here

Home

ATCC10864_002456-T1, ATCC10864_002456-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002456-T1
Unique NameATCC10864_002456-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000051:371250..373163+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002456-T1 ID=ATCC10864_002456-T1|Name=ATCC10864_002456-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1914bp|location=Sequence derived from alignment at MCQH01000051:371250..373163+ (Aspergillus niger ATCC 10864)
ATGAGTGAGCAAGAGAATCCTATCATCCTTCACTGCATTTATTGCAACCA
TGAACACCCTGAGCTCGATGGGGATGCTCTCTACGAGCACATTGAACAGA
ATCTCGATGACCTTAATAGACGTTTCAGGGAAAGAAGAGCCCTCAACGAG
GAGCATCATACGATCATCGACTGCCCAATGTGGCCTGGTTGCCGTCACAG
GCCTCTGACCTCTCTAGAGGGGGACGGCCATGCAATTAGCTGGACATACG
TGGAAATAGCATATGACACGATGGGGGACCATAAGGAATTTATTTCTTGC
GAATTATGCGGCACCCGTCATGTCATATTGACTGGACAATTCCTCGAAAT
TCACATCCGCGATTGCCATAGCTTAGTGTTCGAGATTCCCATGGTTGCGC
ACCCTTCGCCATCTGAACTAACTGAACTCCCACCGTCAACGATGTCTGGA
TCTGACCCCATGGAGCCCGAAGCAGCAGAGGAGTCTCAGGTGGACGTGTC
TGAAGCTGATGTAGTTGAAGCGGAGGATGCTAGGGCGCAGGGGTCCGCAG
AGGAGGCCGCCGCCGAAGCCGAGTACGACTCCGAAGAGGAAGAACCCGAA
GACCTACCTCATGACCTCGGACCATTCCGCACGAGTCTCGAGCAAGCACT
TTCGAATAACATCTTGACTGTCGAGAACTTCGCACAGGTTATATGCACCA
TATGCCGTGATCATAGAGTTCCCGTCAAACACCTTCCCCGGCTCAATTTC
TATAACGCTCTTCGAGCCAGGCTTGCTCCGCTTCTAGATCAATTGATGTA
CAATCCCAGGGTCCACAACAATAATCGAGTGACCGCCCAATATGCCACGC
GCAGAATCCAAGGGACCACCATTGGCGAAGCTATCCTTGAAAACAAAGTC
AGGCCGATCCAGGTTCTCTGTGATCTAGGGTTCCGCATCAACGATATTAT
GCACAGCAACCTGACCGTGCTGGGTGCGGCCATCCTACGCCAGCAAAGCA
AAATCGCCCAATACCTCCTGAACCCTGAATTCAAGGAAAAGTACGGCGTC
GACCCTTTCCGTCCCGTAACTCTGGACACTAGATTTGCAGACAGCACCAC
TCCGATTGCCCTATGCGTGAACAGATATGAGTACGGGGTCCTAAAAACCA
TCCTCAGCTACGAGACACCCCCGAACGTCATGCGAACCGAAGACGTAAAT
CAGCTCTTCCGATCGCAGCTATGGAACCGCCTTAGCCATATAGTCCACGA
CCAATACTTCAGGGACGCCATCTTCGCGGCACGCAACGCTCCCATCTCCC
CGATCCACTGCGCTGTTGTCAACCCTGACCTTTTCGTCCTGCGAAACCTC
GTCTGGGTCCGAGCAGATCACCCAAACATACTCCCCGATTTAGCCGATCA
CATCAACGCCGAGAACAACACCATAATCCAGAACGCAACCCCTCTCCTTC
TCGCCCTCCACCGCCAAAACGCAGAAGCTCTGACTATCCTCCTCAAAACT
CCCGGCATCGACCCCTCACGGCCAAACTCCCGCATGCTCACTCCCCTATA
TTACGCTGCCCGCATAGCTAATCTCGAACTAGCCCGCATCCTAATAGAGT
ACCGTGCTGATCCGAGAGTTGTCACAGCCATGGGCACGCCGCTTCATGCA
CTGGTGCATACGTATAGGGAAGCCAAGGAACGGCGCATGGCTGAGAACCC
CCAGGAGTGGGCATTCCTCAAAGAAAAGCTTGCACGGCTTCAGCTTCTTT
TCTTGGAGAGTGGCGTCGACCCAGATGCTAGGCCTGATGGGGCTGATGCC
ATGGGCAGGACGGCTGGCGAGGAGGCTGAGCTCGTGGAGTATTGGGAGTT
TTCGAATGTGCTTGTTGCGTTTAGAAATGCTGCTGCTGCTCCTGCTCCTG
CTGCGGTGGCGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000051:371250..373163+

>ATCC10864_002456-T1 ID=ATCC10864_002456-T1|Name=ATCC10864_002456-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1914bp|location=Sequence derived from alignment at MCQH01000051:371250..373163+ (Aspergillus niger ATCC 10864)
ATGAGTGAGCAAGAGAATCCTATCATCCTTCACTGCATTTATTGCAACCA
TGAACACCCTGAGCTCGATGGGGATGCTCTCTACGAGCACATTGAACAGA
ATCTCGATGACCTTAATAGACGTTTCAGGGAAAGAAGAGCCCTCAACGAG
GAGCATCATACGATCATCGACTGCCCAATGTGGCCTGGTTGCCGTCACAG
GCCTCTGACCTCTCTAGAGGGGGACGGCCATGCAATTAGCTGGACATACG
TGGAAATAGCATATGACACGATGGGGGACCATAAGGAATTTATTTCTTGC
GAATTATGCGGCACCCGTCATGTCATATTGACTGGACAATTCCTCGAAAT
TCACATCCGCGATTGCCATAGCTTAGTGTTCGAGATTCCCATGGTTGCGC
ACCCTTCGCCATCTGAACTAACTGAACTCCCACCGTCAACGATGTCTGGA
TCTGACCCCATGGAGCCCGAAGCAGCAGAGGAGTCTCAGGTGGACGTGTC
TGAAGCTGATGTAGTTGAAGCGGAGGATGCTAGGGCGCAGGGGTCCGCAG
AGGAGGCCGCCGCCGAAGCCGAGTACGACTCCGAAGAGGAAGAACCCGAA
GACCTACCTCATGACCTCGGACCATTCCGCACGAGTCTCGAGCAAGCACT
TTCGAATAACATCTTGACTGTCGAGAACTTCGCACAGGTTATATGCACCA
TATGCCGTGATCATAGAGTTCCCGTCAAACACCTTCCCCGGCTCAATTTC
TATAACGCTCTTCGAGCCAGGCTTGCTCCGCTTCTAGATCAATTGATGTA
CAATCCCAGGGTCCACAACAATAATCGAGTGACCGCCCAATATGCCACGC
GCAGAATCCAAGGGACCACCATTGGCGAAGCTATCCTTGAAAACAAAGTC
AGGCCGATCCAGGTTCTCTGTGATCTAGGGTTCCGCATCAACGATATTAT
GCACAGCAACCTGACCGTGCTGGGTGCGGCCATCCTACGCCAGCAAAGCA
AAATCGCCCAATACCTCCTGAACCCTGAATTCAAGGAAAAGTACGGCGTC
GACCCTTTCCGTCCCGTAACTCTGGACACTAGATTTGCAGACAGCACCAC
TCCGATTGCCCTATGCGTGAACAGATATGAGTACGGGGTCCTAAAAACCA
TCCTCAGCTACGAGACACCCCCGAACGTCATGCGAACCGAAGACGTAAAT
CAGCTCTTCCGATCGCAGCTATGGAACCGCCTTAGCCATATAGTCCACGA
CCAATACTTCAGGGACGCCATCTTCGCGGCACGCAACGCTCCCATCTCCC
CGATCCACTGCGCTGTTGTCAACCCTGACCTTTTCGTCCTGCGAAACCTC
GTCTGGGTCCGAGCAGATCACCCAAACATACTCCCCGATTTAGCCGATCA
CATCAACGCCGAGAACAACACCATAATCCAGAACGCAACCCCTCTCCTTC
TCGCCCTCCACCGCCAAAACGCAGAAGCTCTGACTATCCTCCTCAAAACT
CCCGGCATCGACCCCTCACGGCCAAACTCCCGCATGCTCACTCCCCTATA
TTACGCTGCCCGCATAGCTAATCTCGAACTAGCCCGCATCCTAATAGAGT
ACCGTGCTGATCCGAGAGTTGTCACAGCCATGGGCACGCCGCTTCATGCA
CTGGTGCATACGTATAGGGAAGCCAAGGAACGGCGCATGGCTGAGAACCC
CCAGGAGTGGGCATTCCTCAAAGAAAAGCTTGCACGGCTTCAGCTTCTTT
TCTTGGAGAGTGGCGTCGACCCAGATGCTAGGCCTGATGGGGCTGATGCC
ATGGGCAGGACGGCTGGCGAGGAGGCTGAGCTCGTGGAGTATTGGGAGTT
TTCGAATGTGCTTGTTGCGTTTAGAAATGCTGCTGCTGCTCCTGCTCCTG
CTGCGGTGGCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002456ATCC10864_002456Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002456-T1.exon1ATCC10864_002456-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002456-T1.cdsATCC10864_002456-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002456-T1ATCC10864_002456-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
InterProIPR020683
InterProIPR036770
InterProIPR002110
Properties
Property NameValue
NoteantiSMASH:Cluster_1000051.4
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000051supercontigMCQH01000051:371250..373163 +
Powered by Drupal