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ATCC10864_002472-T1, ATCC10864_002472-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002472-T1
Unique NameATCC10864_002472-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000051:413377..414978+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002472-T1 ID=ATCC10864_002472-T1|Name=ATCC10864_002472-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1602bp|location=Sequence derived from alignment at MCQH01000051:413377..414978+ (Aspergillus niger ATCC 10864)
ATGACAGTACCCGTTACTGAGCGAGCATTGCAAGTATGCCTGACCTGCAA
ATTGAGAAAGAAGGCATGCGACAAGACACTGCCAACCTGTGGGTACTGCA
CCAAACGGAACCTGCCATGTCGATACCAAGCTCCTCCGGCGGCTGAAGAA
ACGGGCACAGAAGCGACTACTCAGATAGAAATAAATGCGATCTTGCTACA
GATGGTTTCCCTGTTTGGCCCACCATCGGGAAATGTGTCCACAGCACCCA
GAAGGACATGGTACCAAGTATGCCGCATCATCCAATTGGCAGACCTCTCG
TTGCAGGAAATCAGTCGCCGGTATTTCAGCAACTTCCACAAATGGCTTCC
AGTAGTATCGTACGAAATCTTTCAAGGAACTTTGGCCCAGTACAATAGCC
CGTCTTGCCCACCACCGGTGGACTATTCTGTCCTTGTGCTGGCTATGTGC
CTGGTGACCCTGCAGCCGTCGAGACTCAATACACACTTAACACCACATAG
CCTATATGCCACTATGAAGATGCTATTCGCGGAAGCTCAAGCCATAATAT
GTGCCTCAACAAATTTACTTCAGGCTGGACTGCTCATCGCTGCATATGAG
TATGCCAACGGTCGGCCTGAGGCAGCGAACATTACGATGGGGACTTTAGC
CAGAACCGCTTTTGCAATTGGGTTAGCAAATCCCAGCTCCTGGCAGACAA
ACGAAGCTAGTAATATCTCACTTGAAAGACTGGAGCGCCTAAATTTGTGG
TGGGGTGTAATCATTCTCGAAAGGTAGGTCAATTACAAGAAGATTTTGCA
CACATAGGCTCACCCAGCCTAGGCTTATTCTATGCGAGATCAAAGACAAG
ACACAACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTGCCGAG
TGACCTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTCCTCAC
ATGAAAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTGGCCAT
CAGGCACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGAAGGCT
CCCCCAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGACGAGC
AACTGCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGGAAATT
GGCCATGATTGCAGTCCTATAGCATCTGCCGTGAGGTATGTCAGCCGTAA
TCTCCCTGCCTTGTGACCCGAAAGGGAATGGATATCCCTAGTCTGAAGGA
CCGCGCCACTCGGCTGCAGCTAACTGATTCTGCCAGGGCGCTTTGCCTAT
TACATCAGGAAGTCATAGAGTCTCCTTCCAACACCGTTGACTTGCAGAGT
CTGCAATACTCACAGGCGGCTCTAGGAATGGTATCTAATGTAGTGGTGGA
TGTCGCGCGCCACCACAAAGCGCAAATTGCGTGCCAAAATTCCCATGCCG
ATCTACTACCCCTGAGCTGCTCGTACACTCTGCACATGGCAATGAGACAT
ATTCGGGATTGCAGGAAGCTAGTCTGCCCATACAGCCGCTCTAGCGACCT
GAACTCTCTAGTGCAGCTGGATCAAGAATTTTCCGACAGATGGAAAGCCT
GA
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Coding sequence (CDS) from alignment at MCQH01000051:413377..414978+

>ATCC10864_002472-T1 ID=ATCC10864_002472-T1|Name=ATCC10864_002472-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4356bp|location=Sequence derived from alignment at MCQH01000051:413377..414978+ (Aspergillus niger ATCC 10864)
ATGACAGTACCCGTTACTGAGCGAGCATTGCAAGTATGCCTGACCTGCAA
ATTGAGAAAGAAGGCATGCGACAAGACACTGCCAACCTGTGGGTACTGCA
CCAAACGGAACCTGCCATGTCGATACCAAGCTCCTCCGGCGGCTGAAGAA
ACGGGCACAGAAGCGACTACTCAGATAGAAATAAATGCGATCTTGCTACA
GATGGTTTCCCTGTTTGGCCCACCATCGGGAAATGTGTCCACAGCACCCA
GAAGGACATGGTACCAAGTATGCCGCATCATCCAATTGGCAGACCTCTCG
TTGCAGGAAATCAGTCGCCGGTATTTCAGCAACTTCCACAAATGGCTTCC
AGTAGTATCGTACGAAATCTTTCAAGGAACTTTGGCCCAGTACAATAGCC
CGTCTTGCCCACCACCGGTGGACTATTCTGTCCTTGTGCTGGCTATGTGC
CTGGTGACCCTGCAGCCGTCGAGACTCAATACACACTTAACACCACATAG
CCTATATGCCACTATGAAGATGCTATTCGCGGAAGCTCAAGCCATAATAT
GTGCCTCAACAAATTTACTTCAGGCTGGACTGCTCATCGCTGCATATGAG
TATGCCAACGGTCGGCCTGAGGCAGCGAACATTACGATGGGGACTTTAGC
CAGAACCGCTTTTGCAATTGGGTTAGCAAATCCCAGCTCCTGGCAGACAA
ACGAAGCTAGTAATATCTCACTTGAAAGACTGGAGCGCCTAAATTTGTGG
TGGGGTGTAATCATTCTCGAAAGGCTTATTCTATGCGAGATCAAAGACAA
GACACAACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTGCCGA
GTGACCTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTCCTCA
CATGAAAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTGGCCA
TCAGGCACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGAAGGC
TCCCCCAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGACGAG
CAACTGCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGGAAAT
TGGCCATGATTGCAGTCCTATAGCATCTGCCGTGAGGGCGCTTTGCCTAT
TACATCAGGAAGTCATAGAGTCTCCTTCCAACACCGTTGACTTGCAGAGT
CTGCAATACTCACAGGCGGCTCTAGGAATGGTATCTAATGTAGTGGTGGA
TGTCGCGCGCCACCACAAAGCGCAAATTGCGTGCCAAAATTCCCATGCCG
ATCTACTACCCCTGAGCTGCTCGTACACTCTGCACATGGCAATGAGACAT
ATTCGGGATTGCAGGAAGCTAGTCTGCCCATACAGCCGCTCTAGCGACCT
GAACTCTCTAGTGCAGCTGGATCAAGAATTTTCCGACAGATGGAAAGCCT
GAATGACAGTACCCGTTACTGAGCGAGCATTGCAAGTATGCCTGACCTGC
AAATTGAGAAAGAAGGCATGCGACAAGACACTGCCAACCTGTGGGTACTG
CACCAAACGGAACCTGCCATGTCGATACCAAGCTCCTCCGGCGGCTGAAG
AAACGGGCACAGAAGCGACTACTCAGATAGAAATAAATGCGATCTTGCTA
CAGATGGTTTCCCTGTTTGGCCCACCATCGGGAAATGTGTCCACAGCACC
CAGAAGGACATGGTACCAAGTATGCCGCATCATCCAATTGGCAGACCTCT
CGTTGCAGGAAATCAGTCGCCGGTATTTCAGCAACTTCCACAAATGGCTT
CCAGTAGTATCGTACGAAATCTTTCAAGGAACTTTGGCCCAGTACAATAG
CCCGTCTTGCCCACCACCGGTGGACTATTCTGTCCTTGTGCTGGCTATGT
GCCTGGTGACCCTGCAGCCGTCGAGACTCAATACACACTTAACACCACAT
AGCCTATATGCCACTATGAAGATGCTATTCGCGGAAGCTCAAGCCATAAT
ATGTGCCTCAACAAATTTACTTCAGGCTGGACTGCTCATCGCTGCATATG
AGTATGCCAACGGTCGGCCTGAGGCAGCGAACATTACGATGGGGACTTTA
GCCAGAACCGCTTTTGCAATTGGGTTAGCAAATCCCAGCTCCTGGCAGAC
AAACGAAGCTAGTAATATCTCACTTGAAAGACTGGAGCGCCTAAATTTGT
GGTGGGGTGTAATCATTCTCGAAAGGCTTATTCTATGCGAGATCAAAGAC
AAGACACAACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTGCC
GAGTGACCTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTCCT
CACATGAAAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTGGC
CATCAGGCACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGAAG
GCTCCCCCAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGACG
AGCAACTGCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGGAA
ATTGGCCATGATTGCAGTCCTATAGCATCTGCCGTGAGGGCGCTTTGCCT
ATTACATCAGGAAGTCATAGAGTCTCCTTCCAACACCGTTGACTTGCAGA
GTCTGCAATACTCACAGGCGGCTCTAGGAATGGTATCTAATGTAGTGGTG
GATGTCGCGCGCCACCACAAAGCGCAAATTGCGTGCCAAAATTCCCATGC
CGATCTACTACCCCTGAGCTGCTCGTACACTCTGCACATGGCAATGAGAC
ATATTCGGGATTGCAGGAAGCTAGTCTGCCCATACAGCCGCTCTAGCGAC
CTGAACTCTCTAGTGCAGCTGGATCAAGAATTTTCCGACAGATGGAAAGC
CTGAATGACAGTACCCGTTACTGAGCGAGCATTGCAAGTATGCCTGACCT
GCAAATTGAGAAAGAAGGCATGCGACAAGACACTGCCAACCTGTGGGTAC
TGCACCAAACGGAACCTGCCATGTCGATACCAAGCTCCTCCGGCGGCTGA
AGAAACGGGCACAGAAGCGACTACTCAGATAGAAATAAATGCGATCTTGC
TACAGATGGTTTCCCTGTTTGGCCCACCATCGGGAAATGTGTCCACAGCA
CCCAGAAGGACATGGTACCAAGTATGCCGCATCATCCAATTGGCAGACCT
CTCGTTGCAGGAAATCAGTCGCCGGTATTTCAGCAACTTCCACAAATGGC
TTCCAGTAGTATCGTACGAAATCTTTCAAGGAACTTTGGCCCAGTACAAT
AGCCCGTCTTGCCCACCACCGGTGGACTATTCTGTCCTTGTGCTGGCTAT
GTGCCTGGTGACCCTGCAGCCGTCGAGACTCAATACACACTTAACACCAC
ATAGCCTATATGCCACTATGAAGATGCTATTCGCGGAAGCTCAAGCCATA
ATATGTGCCTCAACAAATTTACTTCAGGCTGGACTGCTCATCGCTGCATA
TGAGTATGCCAACGGTCGGCCTGAGGCAGCGAACATTACGATGGGGACTT
TAGCCAGAACCGCTTTTGCAATTGGGTTAGCAAATCCCAGCTCCTGGCAG
ACAAACGAAGCTAGTAATATCTCACTTGAAAGACTGGAGCGCCTAAATTT
GTGGTGGGGTGTAATCATTCTCGAAAGGCTTATTCTATGCGAGATCAAAG
ACAAGACACAACGACCTACAACAGAATGTCCATCTTCTAAGTTTCCTCTG
CCGAGTGACCTCCAGCCTATCCAAGCTAGCCATCAATCAGTAGGAAGCTC
CTCACATGAAAATCTGCCTTCGAACCAGGACAGGAAACCCTGTGTTTTTG
GCCATCAGGCACGAGCTGTGCTCCTCCTTGATCGGGTGTTGGCAGTGCGA
AGGCTCCCCCAAGCCGATAGTGGTAGAACGGTAGAGATTCGGCAACTCGA
CGAGCAACTGCAAAGCTTTCTTTCAGAACGGATAAATACAGCTACCGCGG
AAATTGGCCATGATTGCAGTCCTATAGCATCTGCCGTGAGGGCGCTTTGC
CTATTACATCAGGAAGTCATAGAGTCTCCTTCCAACACCGTTGACTTGCA
GAGTCTGCAATACTCACAGGCGGCTCTAGGAATGGTATCTAATGTAGTGG
TGGATGTCGCGCGCCACCACAAAGCGCAAATTGCGTGCCAAAATTCCCAT
GCCGATCTACTACCCCTGAGCTGCTCGTACACTCTGCACATGGCAATGAG
ACATATTCGGGATTGCAGGAAGCTAGTCTGCCCATACAGCCGCTCTAGCG
ACCTGAACTCTCTAGTGCAGCTGGATCAAGAATTTTCCGACAGATGGAAA
GCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002472ATCC10864_002472Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002472-T1.exon1ATCC10864_002472-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002472-T1.exon2ATCC10864_002472-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002472-T1.exon3ATCC10864_002472-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002472-T1.cdsATCC10864_002472-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002472-T1ATCC10864_002472-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00172
InterProIPR001138
PFAMPF04082
InterProIPR036864
InterProIPR007219
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000051supercontigMCQH01000051:413377..414978 +
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