You are here

Home

ATCC10864_002508-T1, ATCC10864_002508-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002508-T1
Unique NameATCC10864_002508-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:47502..49759+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002508-T1 ID=ATCC10864_002508-T1|Name=ATCC10864_002508-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2258bp|location=Sequence derived from alignment at MCQH01000053:47502..49759+ (Aspergillus niger ATCC 10864)
ATGTCACGCAAGCATGCTCGCAATTCCATGGTGGAAGATGTGGTCATTCC
TGCCCATCTCCTGGCCGCCACCACCCAAGTAAACGGTCCCTTTACAGCTC
GGAGTGACGAGGCATCTGAGTCTGGGCCTGGCCCTATTCATCAGGCCATC
CGCACTGAGGCATTGGAACGACAGTTTGGTCAGCTCCGCCGCTCAGCCAG
TGTGAACAGCTCACATCCACAAAAGCCTAAGGATACTCGCTTCCGGCGCC
AGAGTGCACCCTTGAGTGTAGCTGAGATATCTACGATTGCGGAGATCGAA
CCAGCACAACTTTCGCCCAATGGGTCTTCTCATGTCCAGTGGCAGCATGG
CCAGGACGACTTCGGAGCACACAGCAGACAGCTGAGCGAGTCAATTCCGG
CGACGAGGGGTGACGCGTGGCCTCTTCCACCCCGACCTCACAGTTACCGT
ATCTCCCGCATTGAACCGACAGAGGAGCCTCCCCAACGGACAAACCGACA
CAGTATATACGATGTATACGAGAAGGCCAAAGAAAGGCGCATCGCCCTGC
AGAGAAAGTACTGGGTGCAGGTCCTCTTCGAATACACAGTATATATTTTC
CTTGCAGCCTTCATCTACTTCGTCCTGATTGGGATGCCCCTCTGGCGAGG
TGCCGTGTGGTGGCTCTACTACGTAGTGCGTACCAAGTTTGTCATTCCAG
GTGGCTGGGGAATCACAATTGGCATTGCTATTCTGTAGGTATCGCTCATC
GTCTTTACGACAAGAGACTAATGACTTACTCCAAAGCTACGCGTTTACTC
CCTTGCTACTGCTCTTCGAGAAGAACCCTCCCCCTGTGGACAGCAATTCA
AAAGAGGGCGACCTCGAGGGCAATCGAAACACAGCGAAAAGTACAGCCCT
TCTCATTCCCTGCTATAAATCTGCCAACATTATTGGCCCGACACTCGACG
CGGCGCTACACATCTTTCCGCCTGAAAACATTTTCGTCATTGCGAACGGC
AACTCCCCAGAGCCATTAGACAATACTGAAGAAGTGTGCCGCCCATACGG
CGTAAACCACCTTTGGTGTCCAGTTGGAAGCAAGATTATCGCCCAGTTTG
TTGGTTGCTACGCGGCTAAAGAGTTTCCCCATGTTCTCCTGATCGACGAC
GACTGCGCACTGCCTCCGAACTTTCCTGTCGTTAGTGACCGACTCAAAGG
CCGTGTACAATGTATCGGATATACCATTAAGAGTGTTGGGCCCGAGTCCT
CACGCGGCACCTTATGCCAGCAGGCACAGGACCTCGAGTACAAGATATCA
GGCCTTCAGCGTGCATTCGCCGGTCTTTTAGGCAGCGCAACATTCCCGCA
CGGAGCCATCTCTCTATGGAAGACCGACTTCCTCAAGCAGACCTTCCATG
ACCATCCAGGATTCTCTGTGTCTGAAGATTGGTTTTTCGGAGATAGCTGT
CGTCGGCTAGGCGGGCGTATCAAGATGTGCTCTGCTGTTTTTGTTGAGAC
AGAGACCCCGTCCGCCGTTTTCTTCAGTTCAGGCGGCTCACGAGGAGGAT
TCGGCGAGATGACCATCTTCAAACAGAGATTTATGCGCTGGAACTTCTTC
TTCGTCAACGGCATGTGGTACAATATGAAATATATCTTATGCAGCTGGAA
TCTCGGTTTCTGGGAGCTGGGCGCGAAGCTGTTTGTTTTTCAAGAGGTAG
GTTCTACATCCGCCGAGCTGTGCAATGGCACAAACAACAAGACCTTATGC
TTACTAAAACCAGGTCTACGAAACCCTACTATACCTCCTCGCTCCGTTCG
TCCTACCGATCTCGCTCGTGGTCCAACCAGCATTCTGCGGCATCATGTTG
GGCGTCACCAACGGCTTGTACTTTCTAAACGTCGTCATCTTCAACCTGGT
ACATCTACGCCTGAAGAAGGAAGCTGTCTCCTGGAAATGCTTGCTCCTCT
ACTACATGCCGTATAAAATCGTCCTTTTCATCATCAACGTCGTCAGCTGC
TATTGGTCTCTGTTCAAGTACGCCCGGTACTTCGCCACGAGACACCCCAA
AGTCATCGAGGATGACAAAGCTGTGGAGGTAGTACTGCGTCTAGAAGATA
CCACTAATAATGATCCCAAGCCAACGAACAAGGCACCGGGTCTTGGTCGG
AGTTTCTCCGTGACTAAGGTCAGGGCTAGGAAGACTAGCAACGCGGGCTC
AAAACCGGCCGGGCCTGGAGGTGTTTCTGTTGCTGGTGCCGAGGGCTCTT
GGATTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000053:47502..49759+

>ATCC10864_002508-T1 ID=ATCC10864_002508-T1|Name=ATCC10864_002508-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6417bp|location=Sequence derived from alignment at MCQH01000053:47502..49759+ (Aspergillus niger ATCC 10864)
ATGTCACGCAAGCATGCTCGCAATTCCATGGTGGAAGATGTGGTCATTCC
TGCCCATCTCCTGGCCGCCACCACCCAAGTAAACGGTCCCTTTACAGCTC
GGAGTGACGAGGCATCTGAGTCTGGGCCTGGCCCTATTCATCAGGCCATC
CGCACTGAGGCATTGGAACGACAGTTTGGTCAGCTCCGCCGCTCAGCCAG
TGTGAACAGCTCACATCCACAAAAGCCTAAGGATACTCGCTTCCGGCGCC
AGAGTGCACCCTTGAGTGTAGCTGAGATATCTACGATTGCGGAGATCGAA
CCAGCACAACTTTCGCCCAATGGGTCTTCTCATGTCCAGTGGCAGCATGG
CCAGGACGACTTCGGAGCACACAGCAGACAGCTGAGCGAGTCAATTCCGG
CGACGAGGGGTGACGCGTGGCCTCTTCCACCCCGACCTCACAGTTACCGT
ATCTCCCGCATTGAACCGACAGAGGAGCCTCCCCAACGGACAAACCGACA
CAGTATATACGATGTATACGAGAAGGCCAAAGAAAGGCGCATCGCCCTGC
AGAGAAAGTACTGGGTGCAGGTCCTCTTCGAATACACAGTATATATTTTC
CTTGCAGCCTTCATCTACTTCGTCCTGATTGGGATGCCCCTCTGGCGAGG
TGCCGTGTGGTGGCTCTACTACGTAGTGCGTACCAAGTTTGTCATTCCAG
GTGGCTGGGGAATCACAATTGGCATTGCTATTCTCTACGCGTTTACTCCC
TTGCTACTGCTCTTCGAGAAGAACCCTCCCCCTGTGGACAGCAATTCAAA
AGAGGGCGACCTCGAGGGCAATCGAAACACAGCGAAAAGTACAGCCCTTC
TCATTCCCTGCTATAAATCTGCCAACATTATTGGCCCGACACTCGACGCG
GCGCTACACATCTTTCCGCCTGAAAACATTTTCGTCATTGCGAACGGCAA
CTCCCCAGAGCCATTAGACAATACTGAAGAAGTGTGCCGCCCATACGGCG
TAAACCACCTTTGGTGTCCAGTTGGAAGCAAGATTATCGCCCAGTTTGTT
GGTTGCTACGCGGCTAAAGAGTTTCCCCATGTTCTCCTGATCGACGACGA
CTGCGCACTGCCTCCGAACTTTCCTGTCGTTAGTGACCGACTCAAAGGCC
GTGTACAATGTATCGGATATACCATTAAGAGTGTTGGGCCCGAGTCCTCA
CGCGGCACCTTATGCCAGCAGGCACAGGACCTCGAGTACAAGATATCAGG
CCTTCAGCGTGCATTCGCCGGTCTTTTAGGCAGCGCAACATTCCCGCACG
GAGCCATCTCTCTATGGAAGACCGACTTCCTCAAGCAGACCTTCCATGAC
CATCCAGGATTCTCTGTGTCTGAAGATTGGTTTTTCGGAGATAGCTGTCG
TCGGCTAGGCGGGCGTATCAAGATGTGCTCTGCTGTTTTTGTTGAGACAG
AGACCCCGTCCGCCGTTTTCTTCAGTTCAGGCGGCTCACGAGGAGGATTC
GGCGAGATGACCATCTTCAAACAGAGATTTATGCGCTGGAACTTCTTCTT
CGTCAACGGCATGTGGTACAATATGAAATATATCTTATGCAGCTGGAATC
TCGGTTTCTGGGAGCTGGGCGCGAAGCTGTTTGTTTTTCAAGAGGTCTAC
GAAACCCTACTATACCTCCTCGCTCCGTTCGTCCTACCGATCTCGCTCGT
GGTCCAACCAGCATTCTGCGGCATCATGTTGGGCGTCACCAACGGCTTGT
ACTTTCTAAACGTCGTCATCTTCAACCTGGTACATCTACGCCTGAAGAAG
GAAGCTGTCTCCTGGAAATGCTTGCTCCTCTACTACATGCCGTATAAAAT
CGTCCTTTTCATCATCAACGTCGTCAGCTGCTATTGGTCTCTGTTCAAGT
ACGCCCGGTACTTCGCCACGAGACACCCCAAAGTCATCGAGGATGACAAA
GCTGTGGAGGTAGTACTGCGTCTAGAAGATACCACTAATAATGATCCCAA
GCCAACGAACAAGGCACCGGGTCTTGGTCGGAGTTTCTCCGTGACTAAGG
TCAGGGCTAGGAAGACTAGCAACGCGGGCTCAAAACCGGCCGGGCCTGGA
GGTGTTTCTGTTGCTGGTGCCGAGGGCTCTTGGATTTGAATGTCACGCAA
GCATGCTCGCAATTCCATGGTGGAAGATGTGGTCATTCCTGCCCATCTCC
TGGCCGCCACCACCCAAGTAAACGGTCCCTTTACAGCTCGGAGTGACGAG
GCATCTGAGTCTGGGCCTGGCCCTATTCATCAGGCCATCCGCACTGAGGC
ATTGGAACGACAGTTTGGTCAGCTCCGCCGCTCAGCCAGTGTGAACAGCT
CACATCCACAAAAGCCTAAGGATACTCGCTTCCGGCGCCAGAGTGCACCC
TTGAGTGTAGCTGAGATATCTACGATTGCGGAGATCGAACCAGCACAACT
TTCGCCCAATGGGTCTTCTCATGTCCAGTGGCAGCATGGCCAGGACGACT
TCGGAGCACACAGCAGACAGCTGAGCGAGTCAATTCCGGCGACGAGGGGT
GACGCGTGGCCTCTTCCACCCCGACCTCACAGTTACCGTATCTCCCGCAT
TGAACCGACAGAGGAGCCTCCCCAACGGACAAACCGACACAGTATATACG
ATGTATACGAGAAGGCCAAAGAAAGGCGCATCGCCCTGCAGAGAAAGTAC
TGGGTGCAGGTCCTCTTCGAATACACAGTATATATTTTCCTTGCAGCCTT
CATCTACTTCGTCCTGATTGGGATGCCCCTCTGGCGAGGTGCCGTGTGGT
GGCTCTACTACGTAGTGCGTACCAAGTTTGTCATTCCAGGTGGCTGGGGA
ATCACAATTGGCATTGCTATTCTCTACGCGTTTACTCCCTTGCTACTGCT
CTTCGAGAAGAACCCTCCCCCTGTGGACAGCAATTCAAAAGAGGGCGACC
TCGAGGGCAATCGAAACACAGCGAAAAGTACAGCCCTTCTCATTCCCTGC
TATAAATCTGCCAACATTATTGGCCCGACACTCGACGCGGCGCTACACAT
CTTTCCGCCTGAAAACATTTTCGTCATTGCGAACGGCAACTCCCCAGAGC
CATTAGACAATACTGAAGAAGTGTGCCGCCCATACGGCGTAAACCACCTT
TGGTGTCCAGTTGGAAGCAAGATTATCGCCCAGTTTGTTGGTTGCTACGC
GGCTAAAGAGTTTCCCCATGTTCTCCTGATCGACGACGACTGCGCACTGC
CTCCGAACTTTCCTGTCGTTAGTGACCGACTCAAAGGCCGTGTACAATGT
ATCGGATATACCATTAAGAGTGTTGGGCCCGAGTCCTCACGCGGCACCTT
ATGCCAGCAGGCACAGGACCTCGAGTACAAGATATCAGGCCTTCAGCGTG
CATTCGCCGGTCTTTTAGGCAGCGCAACATTCCCGCACGGAGCCATCTCT
CTATGGAAGACCGACTTCCTCAAGCAGACCTTCCATGACCATCCAGGATT
CTCTGTGTCTGAAGATTGGTTTTTCGGAGATAGCTGTCGTCGGCTAGGCG
GGCGTATCAAGATGTGCTCTGCTGTTTTTGTTGAGACAGAGACCCCGTCC
GCCGTTTTCTTCAGTTCAGGCGGCTCACGAGGAGGATTCGGCGAGATGAC
CATCTTCAAACAGAGATTTATGCGCTGGAACTTCTTCTTCGTCAACGGCA
TGTGGTACAATATGAAATATATCTTATGCAGCTGGAATCTCGGTTTCTGG
GAGCTGGGCGCGAAGCTGTTTGTTTTTCAAGAGGTCTACGAAACCCTACT
ATACCTCCTCGCTCCGTTCGTCCTACCGATCTCGCTCGTGGTCCAACCAG
CATTCTGCGGCATCATGTTGGGCGTCACCAACGGCTTGTACTTTCTAAAC
GTCGTCATCTTCAACCTGGTACATCTACGCCTGAAGAAGGAAGCTGTCTC
CTGGAAATGCTTGCTCCTCTACTACATGCCGTATAAAATCGTCCTTTTCA
TCATCAACGTCGTCAGCTGCTATTGGTCTCTGTTCAAGTACGCCCGGTAC
TTCGCCACGAGACACCCCAAAGTCATCGAGGATGACAAAGCTGTGGAGGT
AGTACTGCGTCTAGAAGATACCACTAATAATGATCCCAAGCCAACGAACA
AGGCACCGGGTCTTGGTCGGAGTTTCTCCGTGACTAAGGTCAGGGCTAGG
AAGACTAGCAACGCGGGCTCAAAACCGGCCGGGCCTGGAGGTGTTTCTGT
TGCTGGTGCCGAGGGCTCTTGGATTTGAATGTCACGCAAGCATGCTCGCA
ATTCCATGGTGGAAGATGTGGTCATTCCTGCCCATCTCCTGGCCGCCACC
ACCCAAGTAAACGGTCCCTTTACAGCTCGGAGTGACGAGGCATCTGAGTC
TGGGCCTGGCCCTATTCATCAGGCCATCCGCACTGAGGCATTGGAACGAC
AGTTTGGTCAGCTCCGCCGCTCAGCCAGTGTGAACAGCTCACATCCACAA
AAGCCTAAGGATACTCGCTTCCGGCGCCAGAGTGCACCCTTGAGTGTAGC
TGAGATATCTACGATTGCGGAGATCGAACCAGCACAACTTTCGCCCAATG
GGTCTTCTCATGTCCAGTGGCAGCATGGCCAGGACGACTTCGGAGCACAC
AGCAGACAGCTGAGCGAGTCAATTCCGGCGACGAGGGGTGACGCGTGGCC
TCTTCCACCCCGACCTCACAGTTACCGTATCTCCCGCATTGAACCGACAG
AGGAGCCTCCCCAACGGACAAACCGACACAGTATATACGATGTATACGAG
AAGGCCAAAGAAAGGCGCATCGCCCTGCAGAGAAAGTACTGGGTGCAGGT
CCTCTTCGAATACACAGTATATATTTTCCTTGCAGCCTTCATCTACTTCG
TCCTGATTGGGATGCCCCTCTGGCGAGGTGCCGTGTGGTGGCTCTACTAC
GTAGTGCGTACCAAGTTTGTCATTCCAGGTGGCTGGGGAATCACAATTGG
CATTGCTATTCTCTACGCGTTTACTCCCTTGCTACTGCTCTTCGAGAAGA
ACCCTCCCCCTGTGGACAGCAATTCAAAAGAGGGCGACCTCGAGGGCAAT
CGAAACACAGCGAAAAGTACAGCCCTTCTCATTCCCTGCTATAAATCTGC
CAACATTATTGGCCCGACACTCGACGCGGCGCTACACATCTTTCCGCCTG
AAAACATTTTCGTCATTGCGAACGGCAACTCCCCAGAGCCATTAGACAAT
ACTGAAGAAGTGTGCCGCCCATACGGCGTAAACCACCTTTGGTGTCCAGT
TGGAAGCAAGATTATCGCCCAGTTTGTTGGTTGCTACGCGGCTAAAGAGT
TTCCCCATGTTCTCCTGATCGACGACGACTGCGCACTGCCTCCGAACTTT
CCTGTCGTTAGTGACCGACTCAAAGGCCGTGTACAATGTATCGGATATAC
CATTAAGAGTGTTGGGCCCGAGTCCTCACGCGGCACCTTATGCCAGCAGG
CACAGGACCTCGAGTACAAGATATCAGGCCTTCAGCGTGCATTCGCCGGT
CTTTTAGGCAGCGCAACATTCCCGCACGGAGCCATCTCTCTATGGAAGAC
CGACTTCCTCAAGCAGACCTTCCATGACCATCCAGGATTCTCTGTGTCTG
AAGATTGGTTTTTCGGAGATAGCTGTCGTCGGCTAGGCGGGCGTATCAAG
ATGTGCTCTGCTGTTTTTGTTGAGACAGAGACCCCGTCCGCCGTTTTCTT
CAGTTCAGGCGGCTCACGAGGAGGATTCGGCGAGATGACCATCTTCAAAC
AGAGATTTATGCGCTGGAACTTCTTCTTCGTCAACGGCATGTGGTACAAT
ATGAAATATATCTTATGCAGCTGGAATCTCGGTTTCTGGGAGCTGGGCGC
GAAGCTGTTTGTTTTTCAAGAGGTCTACGAAACCCTACTATACCTCCTCG
CTCCGTTCGTCCTACCGATCTCGCTCGTGGTCCAACCAGCATTCTGCGGC
ATCATGTTGGGCGTCACCAACGGCTTGTACTTTCTAAACGTCGTCATCTT
CAACCTGGTACATCTACGCCTGAAGAAGGAAGCTGTCTCCTGGAAATGCT
TGCTCCTCTACTACATGCCGTATAAAATCGTCCTTTTCATCATCAACGTC
GTCAGCTGCTATTGGTCTCTGTTCAAGTACGCCCGGTACTTCGCCACGAG
ACACCCCAAAGTCATCGAGGATGACAAAGCTGTGGAGGTAGTACTGCGTC
TAGAAGATACCACTAATAATGATCCCAAGCCAACGAACAAGGCACCGGGT
CTTGGTCGGAGTTTCTCCGTGACTAAGGTCAGGGCTAGGAAGACTAGCAA
CGCGGGCTCAAAACCGGCCGGGCCTGGAGGTGTTTCTGTTGCTGGTGCCG
AGGGCTCTTGGATTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002508ATCC10864_002508Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002508-T1.exon1ATCC10864_002508-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002508-T1.exon2ATCC10864_002508-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002508-T1.exon3ATCC10864_002508-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002508-T1.cdsATCC10864_002508-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002508-T1ATCC10864_002508-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF13632
PFAMPF13641
InterProIPR029044
Properties
Property NameValue
NoteCAZy:GT2_Glyco_tranf_2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:47502..49759 +
Powered by Drupal