You are here

Home

ATCC10864_002521-T1, ATCC10864_002521-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002521-T1
Unique NameATCC10864_002521-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:81467..82123-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002521-T1 ID=ATCC10864_002521-T1|Name=ATCC10864_002521-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=657bp|location=Sequence derived from alignment at MCQH01000053:81467..82123- (Aspergillus niger ATCC 10864)
ATGAGCAACAACAAGCAATCCTCCGCCTACGGCACGCCCTCCTCGGACAC
CGCATTCCGCAAAACCTGGGACCGCGAAGAATACGCCAAAAAAGCCGCCG
ATGACGAAGCCAAGCGTAAGGAAGAATCCAAAGCCCGGTATGAGGCCAAA
CTCCTAGGCAAGAAATGGCACGCGCCGGTGGATTACAGCCAACTTGAAGC
CACGACATCGCGCAAAGAGCGACTCGATGTCGCTTCGATGGTTGGCAAGA
CGACTATTGTCGCGTCGGGGTCAGCGATCGGAAAGAGAGGTCGGGGTGCT
GGATTCTACTGCTCGGACTGTGATTTGACGTTTAAGGATAACTTGCAGCT
TGTGGAGCATTTGAATAGCAAGCAGCATTTGATTGCAACGGGGCAGAGCG
GGGAGGTTACGAGGGCTACGGTGGAGGATGTGCGGGAGAGGTTGAGGATG
TTGGCGTATCGGAAGCGGGTGCGCGAGGAGGAAGAGAGACGGGCTTGGCA
GTTGGATCTTGGGGAGAGGCTGAAGGAGCGGGAGGAGCAGGATGCTAAGG
AGAGGGAGGAGAAGAGGAGGAAGAGGAATGAGAAGCGTCGTAAGGGGGGC
GATGGGATCAAGCAGGAGGATGAGAGCTGGGAGGGCAGGTTGGGGATTAT
TGCGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000053:81467..82123-

>ATCC10864_002521-T1 ID=ATCC10864_002521-T1|Name=ATCC10864_002521-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=657bp|location=Sequence derived from alignment at MCQH01000053:81467..82123- (Aspergillus niger ATCC 10864)
ATGAGCAACAACAAGCAATCCTCCGCCTACGGCACGCCCTCCTCGGACAC
CGCATTCCGCAAAACCTGGGACCGCGAAGAATACGCCAAAAAAGCCGCCG
ATGACGAAGCCAAGCGTAAGGAAGAATCCAAAGCCCGGTATGAGGCCAAA
CTCCTAGGCAAGAAATGGCACGCGCCGGTGGATTACAGCCAACTTGAAGC
CACGACATCGCGCAAAGAGCGACTCGATGTCGCTTCGATGGTTGGCAAGA
CGACTATTGTCGCGTCGGGGTCAGCGATCGGAAAGAGAGGTCGGGGTGCT
GGATTCTACTGCTCGGACTGTGATTTGACGTTTAAGGATAACTTGCAGCT
TGTGGAGCATTTGAATAGCAAGCAGCATTTGATTGCAACGGGGCAGAGCG
GGGAGGTTACGAGGGCTACGGTGGAGGATGTGCGGGAGAGGTTGAGGATG
TTGGCGTATCGGAAGCGGGTGCGCGAGGAGGAAGAGAGACGGGCTTGGCA
GTTGGATCTTGGGGAGAGGCTGAAGGAGCGGGAGGAGCAGGATGCTAAGG
AGAGGGAGGAGAAGAGGAGGAAGAGGAATGAGAAGCGTCGTAAGGGGGGC
GATGGGATCAAGCAGGAGGATGAGAGCTGGGAGGGCAGGTTGGGGATTAT
TGCGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002521ATCC10864_002521Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002521-T1.cdsATCC10864_002521-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002521-T1.exon1ATCC10864_002521-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002521-T1ATCC10864_002521-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12874
InterProIPR040107
InterProIPR036236
InterProIPR013087
PFAMPF12171
InterProIPR022755
InterProIPR003604
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:81467..82123 -
Powered by Drupal