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ATCC10864_002529-T1, ATCC10864_002529-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002529-T1
Unique NameATCC10864_002529-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:98460..100260-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002529-T1 ID=ATCC10864_002529-T1|Name=ATCC10864_002529-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1801bp|location=Sequence derived from alignment at MCQH01000053:98460..100260- (Aspergillus niger ATCC 10864)
ATGACGCAGATCCCTGCGGGCAAGTCTACAGGAGGCGTTCTCCAGATCCC
CGCCGCTGCGACTCAGAAGAATGCCTCTGCGCCGCCAAAGAAGGCTCCAA
AGCCAGCCGCGCCTCGATTGAAGCTCCTCGTCAGACGTCTGCCACCCGGA
CTAACACAAGCGGAATTCGAGACAGCGTTGGGCTCGGAATGGAAGGTTGG
CGGTGGGAAGGTCGACTGGTTCCAATACAAGCCAGGAAAGGTCTCTAAAG
AGTAAGCTAGCATTGTAACCTGTGAAGACTTTCGCTAACAGTATGCTGTA
TAGTCCAGCCAAACCTTCTCGGCCTTCGCGTGCGTATATCCATGTCATGT
CCAGCGATCACACCATCCCGCTCTCGAACAAAGTCCGCCAAACGTCTTTC
TTGGACGCCCGTAATACCTCAACCGATCCTGTCCTTTTGGGACCTCCATC
TTTGGAATTCGCACCTTATGCCAAGATTGCCGGAAACCGTTCGCGCAAAG
ACGCCCGTCAAGGAACTATCGACCAAGACCCCGAGTTCATCGCTTTTCTC
GAGAGCCTCACGCAACCACTTGCCAAACCGGCTCCTGTCGAGTCTGGCGC
TGATGGGGAGGATAAGAAGGAGACGGTGACTGTTACGCCTTTGGTGCAGT
ACATCAGAGAGAAGAAGGCCAACAAGGCGAAGGAATCCAGCAAATCTAAA
CACAAGTCGGACAAGGACTCCAAGGGGGAGAAGATCCAGGCGAAGAAGTT
GCTACAACGTCCTGACAGGGATACAAAGGACTCTGCTGCTACGGAGAAAC
CCGAGAAGAAATCCAAGTCCGACAAAGCTACCAAGGAAGCTGTGAAGGCC
GCAAACAAGCAGGCTGCTAATGTTGCTGCCAAGCAAGCCGCGAAATCATC
TCCAGCGCAAAACTCACCCAAGGATACGCCACAGACATCTACAGAGCGGA
AACGCGAACGTGGAAGTGTCGCGGCTGCTGCCAAGATCCTCCAGCGCGAC
CTGGGGCTTGCTCCGTCCGGTCGCCGCAGGGGTGGCAAAGCAGCGGCCGT
TGATGGAGATACGCCCAAGTCTGATCAGAGCGGAACTGCAACCCCAGATA
CGAGCAAGAAGGAGACGCCGTCCAGACCTTCCAAGGGGGCGAACTCGGCT
CGGGACAAGTCCAAGGGCAGCAACACACAACCACCCAGTGAGCCATCCGA
AGCAAGCACTCCAGTCAGTACTACACCTAAGCCGGGAAAGTCTGGGAAGG
GGAAGCAAGCATCGGCAGGACCGGCAGCGACCGCTACCCAAGCATTCCTC
AAGCACGCCAACCCATCTCAGGGCGTTACCGAGCCACTTCTGGAAGCCGC
ATTCGCGCCATTCGGAAAGGTTCTCAAAGTGGAGATTGATAAGAAGAAAG
GATTCGGCTACATTGATTTCGCAGAACCCGACGGACTTCAAAAGGCCATT
GCTGCTAGTCCTGTCTCGGTCGCGCAGAGTCAAGTTGTCGTGCTAGAGAG
AAAGGCCAACCCCGGTGGAGAGAAGGGCCGCGGCAAAGGCCGCAGTGAAG
CCCAAGCATCCTCGGGAGGCGGCGGCGGCGGTGGTGGTGGTGGCGGTGGT
GGTAACAATAGCCGGGGGAATAAGTCCAATGAAAGCGGCTCGGGGGGCAA
CTCATCTCGTGGACCACGCGGTGGACGAGGGTCCAAGGGCAAGGGAGCCC
CCAAGGGAGGAGGAGGCGGAGGAGGAGGAAACAGTGGTGGAAATGCCGGG
GCTGCGAATGGGAATCACCCTGAGAGCAAGGGGGGTTCAGATAGTAAATG
A
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Coding sequence (CDS) from alignment at MCQH01000053:98460..100260-

>ATCC10864_002529-T1 ID=ATCC10864_002529-T1|Name=ATCC10864_002529-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3498bp|location=Sequence derived from alignment at MCQH01000053:98460..100260- (Aspergillus niger ATCC 10864)
TCCAGCCAAACCTTCTCGGCCTTCGCGTGCGTATATCCATGTCATGTCCA
GCGATCACACCATCCCGCTCTCGAACAAAGTCCGCCAAACGTCTTTCTTG
GACGCCCGTAATACCTCAACCGATCCTGTCCTTTTGGGACCTCCATCTTT
GGAATTCGCACCTTATGCCAAGATTGCCGGAAACCGTTCGCGCAAAGACG
CCCGTCAAGGAACTATCGACCAAGACCCCGAGTTCATCGCTTTTCTCGAG
AGCCTCACGCAACCACTTGCCAAACCGGCTCCTGTCGAGTCTGGCGCTGA
TGGGGAGGATAAGAAGGAGACGGTGACTGTTACGCCTTTGGTGCAGTACA
TCAGAGAGAAGAAGGCCAACAAGGCGAAGGAATCCAGCAAATCTAAACAC
AAGTCGGACAAGGACTCCAAGGGGGAGAAGATCCAGGCGAAGAAGTTGCT
ACAACGTCCTGACAGGGATACAAAGGACTCTGCTGCTACGGAGAAACCCG
AGAAGAAATCCAAGTCCGACAAAGCTACCAAGGAAGCTGTGAAGGCCGCA
AACAAGCAGGCTGCTAATGTTGCTGCCAAGCAAGCCGCGAAATCATCTCC
AGCGCAAAACTCACCCAAGGATACGCCACAGACATCTACAGAGCGGAAAC
GCGAACGTGGAAGTGTCGCGGCTGCTGCCAAGATCCTCCAGCGCGACCTG
GGGCTTGCTCCGTCCGGTCGCCGCAGGGGTGGCAAAGCAGCGGCCGTTGA
TGGAGATACGCCCAAGTCTGATCAGAGCGGAACTGCAACCCCAGATACGA
GCAAGAAGGAGACGCCGTCCAGACCTTCCAAGGGGGCGAACTCGGCTCGG
GACAAGTCCAAGGGCAGCAACACACAACCACCCAGTGAGCCATCCGAAGC
AAGCACTCCAGTCAGTACTACACCTAAGCCGGGAAAGTCTGGGAAGGGGA
AGCAAGCATCGGCAGGACCGGCAGCGACCGCTACCCAAGCATTCCTCAAG
CACGCCAACCCATCTCAGGGCGTTACCGAGCCACTTCTGGAAGCCGCATT
CGCGCCATTCGGAAAGGTTCTCAAAGTGGAGATTGATAAGAAGAAAGGAT
TCGGCTACATTGATTTCGCAGAACCCGACGGACTTCAAAAGGCCATTGCT
GCTAGTCCTGTCTCGGTCGCGCAGAGTCAAGTTGTCGTGCTAGAGAGAAA
GGCCAACCCCGGTGGAGAGAAGGGCCGCGGCAAAGGCCGCAGTGAAGCCC
AAGCATCCTCGGGAGGCGGCGGCGGCGGTGGTGGTGGTGGCGGTGGTGGT
AACAATAGCCGGGGGAATAAGTCCAATGAAAGCGGCTCGGGGGGCAACTC
ATCTCGTGGACCACGCGGTGGACGAGGGTCCAAGGGCAAGGGAGCCCCCA
AGGGAGGAGGAGGCGGAGGAGGAGGAAACAGTGGTGGAAATGCCGGGGCT
GCGAATGGGAATCACCCTGAGAGCAAGGGGGGTTCAGATAGTAAATGAAT
GACGCAGATCCCTGCGGGCAAGTCTACAGGAGGCGTTCTCCAGATCCCCG
CCGCTGCGACTCAGAAGAATGCCTCTGCGCCGCCAAAGAAGGCTCCAAAG
CCAGCCGCGCCTCGATTGAAGCTCCTCGTCAGACGTCTGCCACCCGGACT
AACACAAGCGGAATTCGAGACAGCGTTGGGCTCGGAATGGAAGGTTGGCG
GTGGGAAGGTCGACTGGTTCCAATACAAGCCAGGAAAGGTCTCTAAAGAT
CCAGCCAAACCTTCTCGGCCTTCGCGTGCGTATATCCATGTCATGTCCAG
CGATCACACCATCCCGCTCTCGAACAAAGTCCGCCAAACGTCTTTCTTGG
ACGCCCGTAATACCTCAACCGATCCTGTCCTTTTGGGACCTCCATCTTTG
GAATTCGCACCTTATGCCAAGATTGCCGGAAACCGTTCGCGCAAAGACGC
CCGTCAAGGAACTATCGACCAAGACCCCGAGTTCATCGCTTTTCTCGAGA
GCCTCACGCAACCACTTGCCAAACCGGCTCCTGTCGAGTCTGGCGCTGAT
GGGGAGGATAAGAAGGAGACGGTGACTGTTACGCCTTTGGTGCAGTACAT
CAGAGAGAAGAAGGCCAACAAGGCGAAGGAATCCAGCAAATCTAAACACA
AGTCGGACAAGGACTCCAAGGGGGAGAAGATCCAGGCGAAGAAGTTGCTA
CAACGTCCTGACAGGGATACAAAGGACTCTGCTGCTACGGAGAAACCCGA
GAAGAAATCCAAGTCCGACAAAGCTACCAAGGAAGCTGTGAAGGCCGCAA
ACAAGCAGGCTGCTAATGTTGCTGCCAAGCAAGCCGCGAAATCATCTCCA
GCGCAAAACTCACCCAAGGATACGCCACAGACATCTACAGAGCGGAAACG
CGAACGTGGAAGTGTCGCGGCTGCTGCCAAGATCCTCCAGCGCGACCTGG
GGCTTGCTCCGTCCGGTCGCCGCAGGGGTGGCAAAGCAGCGGCCGTTGAT
GGAGATACGCCCAAGTCTGATCAGAGCGGAACTGCAACCCCAGATACGAG
CAAGAAGGAGACGCCGTCCAGACCTTCCAAGGGGGCGAACTCGGCTCGGG
ACAAGTCCAAGGGCAGCAACACACAACCACCCAGTGAGCCATCCGAAGCA
AGCACTCCAGTCAGTACTACACCTAAGCCGGGAAAGTCTGGGAAGGGGAA
GCAAGCATCGGCAGGACCGGCAGCGACCGCTACCCAAGCATTCCTCAAGC
ACGCCAACCCATCTCAGGGCGTTACCGAGCCACTTCTGGAAGCCGCATTC
GCGCCATTCGGAAAGGTTCTCAAAGTGGAGATTGATAAGAAGAAAGGATT
CGGCTACATTGATTTCGCAGAACCCGACGGACTTCAAAAGGCCATTGCTG
CTAGTCCTGTCTCGGTCGCGCAGAGTCAAGTTGTCGTGCTAGAGAGAAAG
GCCAACCCCGGTGGAGAGAAGGGCCGCGGCAAAGGCCGCAGTGAAGCCCA
AGCATCCTCGGGAGGCGGCGGCGGCGGTGGTGGTGGTGGCGGTGGTGGTA
ACAATAGCCGGGGGAATAAGTCCAATGAAAGCGGCTCGGGGGGCAACTCA
TCTCGTGGACCACGCGGTGGACGAGGGTCCAAGGGCAAGGGAGCCCCCAA
GGGAGGAGGAGGCGGAGGAGGAGGAAACAGTGGTGGAAATGCCGGGGCTG
CGAATGGGAATCACCCTGAGAGCAAGGGGGGTTCAGATAGTAAATGAATG
ACGCAGATCCCTGCGGGCAAGTCTACAGGAGGCGTTCTCCAGATCCCCGC
CGCTGCGACTCAGAAGAATGCCTCTGCGCCGCCAAAGAAGGCTCCAAAGC
CAGCCGCGCCTCGATTGAAGCTCCTCGTCAGACGTCTGCCACCCGGACTA
ACACAAGCGGAATTCGAGACAGCGTTGGGCTCGGAATGGAAGGTTGGCGG
TGGGAAGGTCGACTGGTTCCAATACAAGCCAGGAAAGGTCTCTAAAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002529ATCC10864_002529Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002529-T1ATCC10864_002529-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002529-T1.cdsATCC10864_002529-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002529-T1.exon2ATCC10864_002529-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002529-T1.exon1ATCC10864_002529-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR039722
InterProIPR012677
InterProIPR005120
PFAMPF00076
InterProIPR000504
PFAMPF03467
InterProIPR035979
Properties
Property NameValue
NoteantiSMASH:Cluster_1000053.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:98460..100260 -
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